iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099028

Ensembl Protein ID

POPTR_0016s07790.1

UniProt Accession

B9NEG0; B9NEG0_POPTR

Genbank Protein ID

ERP51636.1

Protein Name

UBIQUITIN EXTENSION protein 1

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_1119711; POPTR_0016s07790g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s07790	POPTR_0016s07790.1	POPTR_0016s07790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	1.10e-41	142.1	1	76
ULD/UDP/UBQ/UBQ_PIM	2.90e-28	98.7	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGIIER SLMALARKYN QEKMICRKYA V 101

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGTTCTCAT TTTCAAGAGT GGAAGATAGA GAGCAAGTAA AGATGCAGAT CTTTGTGAAA 60
ACCCTAACTG GCAAGACCAT TACCCTCGAG GTTGAGAGCA GTGATACCAT CGATAATGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001975--Ribosomal_L40e
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

pop:POPTR_0016s07790g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Eeu-035081	Erinaceus europaeus	94.29	2.00e-33	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence