iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117986

Ensembl Protein ID

ENSTRUP00000018405.1

UniProt Accession

H2T167; H2T167_TAKRU

Protein Name

Uncharacterized protein

Gene Name

dcaf13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000007438.1	ENSTRUT00000018481.1	ENSTRUP00000018405.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-25	89.2	64	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH d+v+c+a   ++  +l+sGs Dg +kvW+l+++ ++++
   Q: 64   GHRDGVNCMAKhaTSlATLLSGSCDGEVKVWNLTKHECVRT 104
           8*******98447555569******************9985 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MKVKVISRNP DDYVRETKYD IQRVPRNYDP TLHPFEVCRE YTRALNATKL DRVFAKPFLA 60
SLDGHRDGVN CMAKHATSLA TLLSGSCDGE VKVWNLTKHE CVRTLQAHEG FVRGMVVRFC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTTCTCGT CAACACATGG CGTACAGAAT GCTAATGTTT TCTCTATTCT TTGAGAAGTG 60
ATTTTTATGT ATATTGTGTA GAAAGTAATT TGTACATTTT GTACCTACCC CGTCATGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	76.61	0.00e+00	746.00
IUUC-Atr-002799	Amborella trichopoda	46.71	3.00e-128	451.00
IUUC-Apl-003675	Anas platyrhynchos	75.56	0.00e+00	708.00
IUUC-Aca-004792	Anolis carolinensis	77.73	0.00e+00	763.00
IUUC-Aly-005998	Arabidopsis lyrata	44.74	9.00e-126	443.00
IUUC-Ath-007526	Arabidopsis thaliana	44.74	3.00e-125	441.00
IUUC-Ago-007774	Ashbya gossypii	45.92	4.00e-119	421.00
IUUC-Acl-008024	Aspergillus clavatus	43.76	5.00e-108	384.00
IUUC-Afu-008930	Aspergillus fumigatus	43.70	1.00e-107	383.00
IUUC-Ani-009370	Aspergillus nidulans	44.18	6.00e-110	390.00
IUUC-Ang-009827	Aspergillus niger	45.93	1.00e-112	399.00
IUUC-Aor-010060	Aspergillus oryzae	43.79	6.00e-104	370.00
IUUC-Ate-010434	Aspergillus terreus	43.67	3.00e-89	322.00
IUUC-Ame-011967	Astyanax mexicanus	77.48	0.00e+00	751.00
IUUC-Bgr-011989	Blumeria graminis	43.04	2.00e-108	385.00
IUUC-Bta-013291	Bos taurus	57.96	2.00e-154	538.00
IUUC-Bci-013868	Botrytis cinerea	42.58	3.00e-106	378.00
IUUC-Bdi-014343	Brachypodium distachyon	46.49	1.00e-120	426.00
IUUC-Bol-015740	Brassica oleracea	43.42	9.00e-118	416.00
IUUC-Bra-016689	Brassica rapa	43.42	1.00e-116	412.00
IUUC-Cel-018536	Caenorhabditis elegans	51.33	8.00e-125	440.00
IUUC-Cja-018779	Callithrix jacchus	77.28	0.00e+00	763.00
IUUC-Cfa-020105	Canis familiaris	77.73	0.00e+00	762.00
IUUC-Cpo-021538	Cavia porcellus	75.72	0.00e+00	725.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	49.10	3.00e-43	167.00
IUUC-Csa-023492	Chlorocebus sabaeus	77.51	0.00e+00	761.00
IUUC-Cho-024497	Choloepus hoffmanni	65.33	2.00e-127	448.00
IUUC-Cin-025524	Ciona intestinalis	62.02	4.00e-170	590.00
IUUC-Csv-026197	Ciona savignyi	62.58	5.00e-173	600.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	40.62	7.00e-95	340.00
IUUC-Cne-026840	Cryptococcus neoformans	36.91	1.00e-78	288.00
IUUC-Cme-027111	Cyanidioschyzon merolae	33.95	7.00e-74	271.00
IUUC-Dre-027471	Danio rerio	80.37	0.00e+00	760.00
IUUC-Dno-029790	Dasypus novemcinctus	75.89	2.00e-173	601.00
IUUC-Dor-030971	Dipodomys ordii	70.50	5.00e-117	414.00
IUUC-Dse-031563	Dothistroma septosporum	43.86	1.00e-106	379.00
IUUC-Dme-032161	Drosophila melanogaster	58.52	8.00e-163	566.00
IUUC-Ete-033127	Echinops telfairi	72.51	0.00e+00	702.00
IUUC-Eca-033531	Equus caballus	77.10	0.00e+00	718.00
IUUC-Eeu-034663	Erinaceus europaeus	67.18	1.00e-180	626.00
IUUC-Fca-036258	Felis catus	77.95	0.00e+00	764.00
IUUC-Fal-037456	Ficedula albicollis	78.84	0.00e+00	723.00
IUUC-Fox-038025	Fusarium oxysporum	43.83	5.00e-105	374.00
IUUC-Fso-038344	Fusarium solani	44.12	4.00e-100	358.00
IUUC-Gmo-039643	Gadus morhua	83.96	0.00e+00	812.00
IUUC-Ggr-039816	Gaeumannomyces graminis	44.24	6.00e-102	364.00
IUUC-Gga-040143	Gallus gallus	78.84	0.00e+00	751.00
IUUC-Gac-041665	Gasterosteus aculeatus	85.81	0.00e+00	808.00
IUUC-Gma-043073	Glycine max	47.15	1.00e-124	439.00
IUUC-Ggo-045058	Gorilla gorilla	76.61	0.00e+00	759.00
IUUC-Hsa-046843	Homo sapiens	76.61	0.00e+00	755.00
IUUC-Hvu-047654	Hordeum vulgare	47.06	3.00e-71	261.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	77.73	0.00e+00	761.00
IUUC-Kpa-049232	Komagataella pastoris	47.10	3.00e-122	431.00
IUUC-Lch-050542	Latimeria chalumnae	75.84	0.00e+00	764.00
IUUC-Lpe-051622	Leersia perrieri	47.15	3.00e-123	435.00
IUUC-Loc-052674	Lepisosteus oculatus	74.73	0.00e+00	724.00
IUUC-Lma-053108	Leptosphaeria maculans	43.54	3.00e-108	385.00
IUUC-Laf-053385	Loxodonta africana	77.95	0.00e+00	749.00
IUUC-Mcc-055151	Macaca mulatta	77.28	0.00e+00	760.00
IUUC-Meu-056230	Macropus eugenii	79.05	2.00e-105	375.00
IUUC-Mor-057013	Magnaporthe oryzae	42.27	8.00e-98	350.00
IUUC-Mpo-057530	Magnaporthe poae	44.47	4.00e-103	368.00
IUUC-Mtr-058187	Medicago truncatula	46.27	3.00e-125	441.00
IUUC-Mla-058964	Melampsora laricipopulina	39.74	4.00e-93	335.00
IUUC-Mga-059712	Meleagris gallopavo	78.64	0.00e+00	711.00
IUUC-Mvi-060370	Microbotryum violaceum	40.34	7.00e-64	238.00
IUUC-Mmr-061340	Microcebus murinus	73.73	0.00e+00	705.00
IUUC-Mdo-062978	Monodelphis domestica	76.84	0.00e+00	746.00
IUUC-Mmu-063439	Mus musculus	78.17	0.00e+00	758.00
IUUC-Mac-065129	Musa acuminata	46.68	4.00e-127	447.00
IUUC-Mpu-066548	Mustela putorius furo	69.12	2.00e-167	581.00
IUUC-Mlu-067660	Myotis lucifugus	77.73	0.00e+00	767.00
IUUC-Nfi-068455	Neosartorya fischeri	44.86	1.00e-110	393.00
IUUC-Ncr-068848	Neurospora crassa	42.21	2.00e-97	349.00
IUUC-Nle-069923	Nomascus leucogenys	76.61	0.00e+00	756.00
IUUC-Opr-070279	Ochotona princeps	65.79	2.00e-72	266.00
IUUC-Ont-072234	Oreochromis niloticus	87.53	0.00e+00	844.00
IUUC-Oan-073713	Ornithorhynchus anatinus	76.80	2.00e-94	337.00
IUUC-Ocu-073782	Oryctolagus cuniculus	77.06	0.00e+00	758.00
IUUC-Oba-075161	Oryza barthii	47.15	7.00e-124	437.00
IUUC-Obr-076868	Oryza brachyantha	46.93	7.00e-123	433.00
IUUC-Ogl-077062	Oryza glaberrima	47.15	7.00e-124	437.00
IUUC-Ogu-078308	Oryza glumaepatula	47.15	8.00e-124	437.00
IUUC-Oin-079378	Oryza indica	47.15	8.00e-124	437.00
IUUC-Olo-080638	Oryza longistaminata	44.96	3.00e-113	402.00
IUUC-Oni-082368	Oryza nivara	47.15	8.00e-124	437.00
IUUC-Opu-083628	Oryza punctata	47.15	8.00e-124	437.00
IUUC-Oru-085226	Oryza rufipogon	47.15	2.00e-123	435.00
IUUC-Osa-085368	Oryza sativa	46.01	8.00e-69	253.00
IUUC-Ola-086836	Oryzias latipes	86.86	0.00e+00	839.00
IUUC-Olu-087755	Ostreococcus lucimarinus	48.75	2.00e-126	446.00
IUUC-Oga-088170	Otolemur garnettii	78.62	0.00e+00	771.00
IUUC-Oar-089388	Ovis aries	77.28	0.00e+00	753.00
IUUC-Ptr-090494	Pan troglodytes	76.61	0.00e+00	756.00
IUUC-Pan-091697	Papio anubis	77.51	0.00e+00	761.00
IUUC-Psi-093916	Pelodiscus sinensis	75.28	0.00e+00	707.00
IUUC-Pno-095004	Phaeosphaeria nodorum	39.96	6.00e-97	347.00
IUUC-Ppa-095514	Physcomitrella patens	48.46	3.00e-132	464.00
IUUC-Pfo-097432	Poecilia formosa	86.81	0.00e+00	805.00
IUUC-Pab-098423	Pongo abelii	76.61	0.00e+00	758.00
IUUC-Pop-099649	Populus trichocarpa	47.35	1.00e-127	449.00
IUUC-Pca-100365	Procavia capensis	72.83	0.00e+00	678.00
IUUC-Ppe-101379	Prunus persica	45.15	7.00e-123	433.00
IUUC-Pva-102845	Pteropus vampyrus	77.28	0.00e+00	749.00
IUUC-Pgr-103469	Puccinia graminis	37.60	4.00e-65	242.00
IUUC-Ptt-103980	Puccinia triticina	37.63	2.00e-64	239.00
IUUC-Pte-104111	Pyrenophora teres	43.61	1.00e-106	380.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	43.61	2.00e-106	379.00
IUUC-Rno-105082	Rattus norvegicus	77.73	0.00e+00	760.00
IUUC-Sce-106340	Saccharomyces cerevisiae	44.80	1.00e-120	426.00
IUUC-Sha-106584	Sarcophilus harrisii	75.72	0.00e+00	743.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	43.21	2.00e-102	366.00
IUUC-Spo-108046	Schizosaccharomyces pombe	46.26	2.00e-110	392.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	43.01	1.00e-106	380.00
IUUC-Smo-109548	Selaginella moellendorffii	48.13	1.00e-127	449.00
IUUC-Sit-110242	Setaria italica	46.49	2.00e-120	426.00
IUUC-Sly-111762	Solanum lycopersicum	46.71	5.00e-124	437.00
IUUC-Stu-112156	Solanum tuberosum	46.71	7.00e-125	440.00
IUUC-Sbi-114739	Sorghum bicolor	47.59	3.00e-123	434.00
IUUC-Sre-114951	Sporisorium reilianum	39.08	2.00e-100	359.00
IUUC-Ssc-115510	Sus scrofa	76.61	0.00e+00	753.00
IUUC-Tgu-117234	Taeniopygia guttata	78.64	0.00e+00	681.00
IUUC-Tsy-119252	Tarsius syrichta	73.61	0.00e+00	680.00
IUUC-Tni-119785	Tetraodon nigroviridis	94.77	0.00e+00	847.00
IUUC-Tca-121222	Theobroma cacao	46.05	2.00e-122	432.00
IUUC-Tre-122243	Trichoderma reesei	43.39	3.00e-103	368.00
IUUC-Tvi-122293	Trichoderma virens	42.95	3.00e-101	361.00
IUUC-Tae-125191	Triticum aestivum	45.61	8.00e-116	410.00
IUUC-Tur-126098	Triticum urartu	43.92	1.00e-105	376.00
IUUC-Tme-127200	Tuber melanosporum	44.44	5.00e-118	417.00
IUUC-Tbe-127568	Tupaia belangeri	78.76	1.00e-112	400.00
IUUC-Ttr-129185	Tursiops truncatus	67.93	0.00e+00	647.00
IUUC-Uma-129353	Ustilago maydis	39.28	8.00e-100	357.00
IUUC-Vda-129768	Verticillium dahliae	43.91	9.00e-102	363.00
IUUC-Vpa-130572	Vicugna pacos	77.28	0.00e+00	760.00
IUUC-Vvi-131555	Vitis vinifera	46.27	2.00e-123	435.00
IUUC-Xtr-132263	Xenopus tropicalis	78.26	0.00e+00	631.00
IUUC-Xma-133925	Xiphophorus maculatus	87.27	0.00e+00	811.00
IUUC-Yli-134384	Yarrowia lipolytica	45.33	3.00e-114	405.00
IUUC-Zma-135616	Zea mays	47.59	2.00e-121	429.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence