iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131360

UUCD1 version

UUC-ViV-00967

Ensembl Protein ID

VIT_13s0019g00220.t01

UniProt Accession

F6I5T1; F6I5T1_VITVI

Genbank Protein ID

CCB62299.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596752

Gene Name

FY; VIT_13s0019g00220

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0019g00220	VIT_13s0019g00220.t01	VIT_13s0019g00220.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-33	111.6	347	380
UBD/Beta-Prp	1.60e-50	172.6	301	462

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH++ v c+++ ++ + ++++s D  ik++D+r 
   Q: 347  GHKNTVLCVKWnQNgNWVLTASKDQIIKLYDIRA 380
           8**********9555****************886 PP

UBD/Beta-Prp

   S: 46   rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
           rslsgh   v++v+++p++++lv+g++D+++k+wd +tg  + +++gh+++vl+++++++g++++++s+d++i+++d++  ++le  +
   Q: 301  RSLSGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELE-SF 387
           689*********************************************************************************9.** PP
   S: 134  sghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
           +gh++ v+ +++hp+  +++vsGs D+ +  W +  ++   +  g+h++sv  l++++ g  l sgs+d t k+w
   Q: 388  RGHRKDVTALAWHPFHeDYFVSGSFDGSIFHWLVGHETPQVEIPGAHDNSVWDLAWHPIGYILCSGSNDHTTKFW 462
           *************************************************************************** PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MMYGDPQQQM QQQQQMQQQQ QMHQQQQMHQ QQQQIHQQQQ MQQQQQGGDF HRGPLPPPPS 60
QPQPPQSQLP PPPPMMRQPS ASSTNLAPEY HHPSAPPYDA HADSFAAKRM RKLAQRRAVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTAGGTTTA GGGTTAGGGT TTTGGATTTC TCATCCTCGA TCTTCTGCGT ATCTACATCT 60
TCGCTGCTTT GACCTCTTTT GGAAACAATG ATGTACGGTG ATCCTCAACA GCAGATGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0006379--P:mRNA cleavage

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	73.66	0.00e+00	723.00
IUUC-Aml-001363	Ailuropoda melanoleuca	57.03	4.00e-135	475.00
IUUC-Atr-003030	Amborella trichopoda	83.15	0.00e+00	771.00
IUUC-Apl-003409	Anas platyrhynchos	56.73	2.00e-133	469.00
IUUC-Aca-004694	Anolis carolinensis	56.76	1.00e-134	473.00
IUUC-Aly-006063	Arabidopsis lyrata	79.39	0.00e+00	770.00
IUUC-Ath-006583	Arabidopsis thaliana	75.51	0.00e+00	773.00
IUUC-Ago-007805	Ashbya gossypii	44.41	6.00e-89	320.00
IUUC-Acl-008075	Aspergillus clavatus	41.35	1.00e-93	336.00
IUUC-Afl-008582	Aspergillus flavus	42.78	4.00e-91	327.00
IUUC-Afu-008817	Aspergillus fumigatus	41.01	1.00e-80	293.00
IUUC-Ani-009391	Aspergillus nidulans	40.36	7.00e-83	300.00
IUUC-Ang-009750	Aspergillus niger	43.32	1.00e-75	275.00
IUUC-Aor-010085	Aspergillus oryzae	41.35	4.00e-93	334.00
IUUC-Ate-010397	Aspergillus terreus	40.58	5.00e-93	334.00
IUUC-Ame-010741	Astyanax mexicanus	54.37	7.00e-81	295.00
IUUC-Bgr-012169	Blumeria graminis	46.85	1.00e-98	353.00
IUUC-Bta-013265	Bos taurus	57.03	4.00e-135	475.00
IUUC-Bci-013762	Botrytis cinerea	44.36	2.00e-99	355.00
IUUC-Bdi-014849	Brachypodium distachyon	76.02	0.00e+00	758.00
IUUC-Bol-015325	Brassica oleracea	77.09	0.00e+00	761.00
IUUC-Bra-017064	Brassica rapa	79.05	0.00e+00	774.00
IUUC-Cel-018378	Caenorhabditis elegans	46.34	8.00e-116	410.00
IUUC-Cja-019547	Callithrix jacchus	57.03	2.00e-135	476.00
IUUC-Cfa-020031	Canis familiaris	57.03	3.00e-135	475.00
IUUC-Cpo-021554	Cavia porcellus	57.14	1.00e-130	460.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	42.52	2.00e-76	279.00
IUUC-Csa-023146	Chlorocebus sabaeus	56.76	6.00e-135	474.00
IUUC-Cho-024679	Choloepus hoffmanni	52.79	7.00e-122	431.00
IUUC-Cin-025415	Ciona intestinalis	47.96	1.00e-125	442.00
IUUC-Csv-026003	Ciona savignyi	47.17	3.00e-122	431.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	45.30	2.00e-98	352.00
IUUC-Cne-026983	Cryptococcus neoformans	44.50	9.00e-96	343.00
IUUC-Cme-027147	Cyanidioschyzon merolae	49.35	1.00e-114	405.00
IUUC-Dre-028545	Danio rerio	57.29	4.00e-135	474.00
IUUC-Dno-029677	Dasypus novemcinctus	51.49	9.00e-136	477.00
IUUC-Dse-031371	Dothistroma septosporum	43.54	2.00e-95	342.00
IUUC-Dme-031663	Drosophila melanogaster	50.00	2.00e-136	478.00
IUUC-Ete-032511	Echinops telfairi	50.13	3.00e-113	402.00
IUUC-Eca-034152	Equus caballus	57.03	4.00e-135	475.00
IUUC-Eeu-034560	Erinaceus europaeus	42.00	2.00e-44	174.00
IUUC-Fca-035820	Felis catus	57.03	3.00e-135	475.00
IUUC-Fox-037958	Fusarium oxysporum	45.73	3.00e-97	348.00
IUUC-Fso-038162	Fusarium solani	43.48	9.00e-97	347.00
IUUC-Gmo-039708	Gadus morhua	50.79	3.00e-133	468.00
IUUC-Ggr-040031	Gaeumannomyces graminis	41.96	2.00e-89	322.00
IUUC-Gga-040963	Gallus gallus	57.03	4.00e-135	475.00
IUUC-Gac-041541	Gasterosteus aculeatus	56.58	8.00e-132	464.00
IUUC-Gma-043757	Glycine max	87.55	0.00e+00	864.00
IUUC-Ggo-045564	Gorilla gorilla	57.03	2.00e-135	476.00
IUUC-Hsa-045833	Homo sapiens	57.03	2.00e-135	476.00
IUUC-Hvu-047848	Hordeum vulgare	79.27	2.00e-158	551.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	57.03	3.00e-135	475.00
IUUC-Kpa-049308	Komagataella pastoris	40.89	2.00e-88	318.00
IUUC-Lch-050525	Latimeria chalumnae	57.03	2.00e-134	473.00
IUUC-Lpe-051364	Leersia perrieri	73.81	0.00e+00	739.00
IUUC-Loc-052696	Lepisosteus oculatus	57.03	2.00e-136	479.00
IUUC-Lma-052951	Leptosphaeria maculans	46.05	3.00e-98	351.00
IUUC-Laf-053653	Loxodonta africana	57.03	6.00e-135	474.00
IUUC-Mcc-055797	Macaca mulatta	57.03	2.00e-135	476.00
IUUC-Meu-056331	Macropus eugenii	53.73	4.00e-103	369.00
IUUC-Mor-057168	Magnaporthe oryzae	41.84	2.00e-93	335.00
IUUC-Mpo-057510	Magnaporthe poae	44.49	2.00e-63	235.00
IUUC-Mtr-058032	Medicago truncatula	83.79	0.00e+00	795.00
IUUC-Mla-058852	Melampsora laricipopulina	49.22	9.00e-112	396.00
IUUC-Mga-059311	Meleagris gallopavo	57.03	6.00e-135	474.00
IUUC-Mvi-060544	Microbotryum violaceum	50.93	7.00e-116	410.00
IUUC-Mmr-061143	Microcebus murinus	57.03	2.00e-135	476.00
IUUC-Mdo-061977	Monodelphis domestica	57.03	6.00e-135	474.00
IUUC-Mmu-063922	Mus musculus	57.03	3.00e-135	475.00
IUUC-Mac-064961	Musa acuminata	85.06	0.00e+00	853.00
IUUC-Mpu-066079	Mustela putorius furo	60.19	9.00e-119	421.00
IUUC-Mlu-067247	Myotis lucifugus	57.03	3.00e-135	476.00
IUUC-Nfi-068255	Neosartorya fischeri	43.30	2.00e-88	318.00
IUUC-Ncr-068909	Neurospora crassa	45.18	4.00e-102	364.00
IUUC-Nle-068994	Nomascus leucogenys	57.03	2.00e-135	476.00
IUUC-Opr-071079	Ochotona princeps	57.03	1.00e-135	477.00
IUUC-Ont-071971	Oreochromis niloticus	56.50	2.00e-133	469.00
IUUC-Oan-073135	Ornithorhynchus anatinus	57.99	1.00e-120	427.00
IUUC-Ocu-073982	Oryctolagus cuniculus	57.03	8.00e-135	474.00
IUUC-Oba-075297	Oryza barthii	75.52	0.00e+00	752.00
IUUC-Obr-076641	Oryza brachyantha	82.99	0.00e+00	780.00
IUUC-Ogl-077539	Oryza glaberrima	82.32	2.00e-170	591.00
IUUC-Ogu-078807	Oryza glumaepatula	75.52	0.00e+00	752.00
IUUC-Oin-079229	Oryza indica	79.92	0.00e+00	806.00
IUUC-Olo-080371	Oryza longistaminata	78.62	0.00e+00	731.00
IUUC-Ome-081149	Oryza meridionalis	75.31	0.00e+00	748.00
IUUC-Oni-082970	Oryza nivara	75.73	0.00e+00	753.00
IUUC-Opu-083415	Oryza punctata	75.52	0.00e+00	747.00
IUUC-Oru-085236	Oryza rufipogon	75.73	0.00e+00	753.00
IUUC-Ola-087421	Oryzias latipes	54.52	3.00e-135	474.00
IUUC-Olu-087821	Ostreococcus lucimarinus	55.22	1.00e-122	431.00
IUUC-Oga-088132	Otolemur garnettii	57.03	3.00e-135	476.00
IUUC-Oar-089513	Ovis aries	57.03	4.00e-135	475.00
IUUC-Ptr-090717	Pan troglodytes	57.03	2.00e-135	476.00
IUUC-Pan-092108	Papio anubis	57.03	2.00e-135	476.00
IUUC-Psi-093892	Pelodiscus sinensis	57.03	2.00e-134	473.00
IUUC-Pma-094561	Petromyzon marinus	58.09	2.00e-136	479.00
IUUC-Pno-094943	Phaeosphaeria nodorum	43.32	1.00e-98	352.00
IUUC-Ppa-095359	Physcomitrella patens	74.59	0.00e+00	672.00
IUUC-Pfo-096516	Poecilia formosa	56.35	2.00e-132	466.00
IUUC-Pab-097759	Pongo abelii	57.03	2.00e-135	476.00
IUUC-Pop-099553	Populus trichocarpa	83.07	0.00e+00	871.00
IUUC-Ppe-101957	Prunus persica	86.14	0.00e+00	853.00
IUUC-Pva-102918	Pteropus vampyrus	57.03	1.00e-134	474.00
IUUC-Pgr-103594	Puccinia graminis	50.67	3.00e-114	405.00
IUUC-Ptt-103879	Puccinia triticina	52.16	3.00e-96	345.00
IUUC-Pte-104419	Pyrenophora teres	44.44	3.00e-100	358.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	46.28	1.00e-97	349.00
IUUC-Rno-105838	Rattus norvegicus	57.03	2.00e-135	476.00
IUUC-Sce-106331	Saccharomyces cerevisiae	41.48	3.00e-83	301.00
IUUC-Sha-107435	Sarcophilus harrisii	56.73	2.00e-133	469.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	43.42	2.00e-97	348.00
IUUC-Spo-108163	Schizosaccharomyces pombe	43.67	1.00e-101	362.00
IUUC-Smo-109602	Selaginella moellendorffii	72.75	0.00e+00	673.00
IUUC-Sit-109729	Setaria italica	78.66	0.00e+00	775.00
IUUC-Sly-111679	Solanum lycopersicum	84.98	0.00e+00	838.00
IUUC-Sar-113157	Sorex araneus	57.03	7.00e-135	474.00
IUUC-Sbi-114853	Sorghum bicolor	78.45	0.00e+00	775.00
IUUC-Sre-115085	Sporisorium reilianum	43.24	3.00e-95	341.00
IUUC-Ssc-116286	Sus scrofa	56.88	1.00e-133	470.00
IUUC-Tgu-117219	Taeniopygia guttata	57.03	4.00e-135	475.00
IUUC-Tru-117550	Takifugu rubripes	56.76	3.00e-133	468.00
IUUC-Tsy-119294	Tarsius syrichta	57.03	2.00e-135	476.00
IUUC-Tni-120561	Tetraodon nigroviridis	51.47	3.00e-135	475.00
IUUC-Tca-121347	Theobroma cacao	91.51	0.00e+00	917.00
IUUC-Tre-122018	Trichoderma reesei	43.11	3.00e-100	358.00
IUUC-Tvi-122413	Trichoderma virens	43.11	5.00e-99	354.00
IUUC-Tae-123191	Triticum aestivum	76.13	0.00e+00	761.00
IUUC-Tme-127077	Tuber melanosporum	49.20	2.00e-106	379.00
IUUC-Tbe-127744	Tupaia belangeri	38.55	5.00e-69	255.00
IUUC-Ttr-128777	Tursiops truncatus	49.60	1.00e-106	380.00
IUUC-Uma-129568	Ustilago maydis	42.79	1.00e-93	336.00
IUUC-Vda-129834	Verticillium dahliae	41.44	6.00e-93	333.00
IUUC-Vpa-130563	Vicugna pacos	59.34	4.00e-31	129.00
IUUC-Xtr-132630	Xenopus tropicalis	56.76	1.00e-136	480.00
IUUC-Xma-133665	Xiphophorus maculatus	54.28	6.00e-134	471.00
IUUC-Yli-134556	Yarrowia lipolytica	39.91	1.00e-82	299.00
IUUC-Zma-135787	Zea mays	78.87	0.00e+00	791.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence