iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007268

Ensembl Protein ID

AT3G03790.3

UniProt Accession

F4J2C4; F4J2C4_ARATH

Genbank Protein ID

AEE73994.1

Protein Name

Ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein

Genbank Nucleotide ID

CP002686

Gene Name

At3g03790; F20H23.18; F20H23_18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G03790	AT3G03790.3	AT3G03790.3
AT3G03790	AT3G03790.1	AT3G03790.1
AT3G03790	AT3G03790.2	AT3G03790.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/BCR/BTB_Other	29.53	9.00e-27	117.00	IUUC-Spo-108090

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MELSVSPQTQ KMNLQTPRKS SLSGSRKDLW FAIREGSLVD VDSALSILKK TGGNINLRNA 60
YGLTPLHIAV WRNHIPIVRR LLAAGADPDA RDGESGWSSL HRALHFGHLA VASVLIDSGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTGGCTCA TTCAGAAACT TTTTTATACG CCTCTGTTTC TTATGGGGAA GAGGGTATAT 60
TCTCTGTTTT GATTCGCTTC TGTCTTAACA CATTGAAATT TTCCATAGAA GATTCCATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR009091--RCC1/BLIP-II
IPR000408--Reg_chr_condens

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50012--RCC1_3

Pfam

PF12796--Ank_2
PF00415--RCC1

PRINTS

PR00633--RCCNDNSATION

SMART

SM00248--ANK

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

ath:AT3G03790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000696	Aegilops tauschii	60.06	0.00e+00	836.00
IUUC-Aml-001765	Ailuropoda melanoleuca	31.57	2.00e-35	144.00
IUUC-Atr-003012	Amborella trichopoda	57.69	0.00e+00	1086.00
IUUC-Apl-003868	Anas platyrhynchos	30.39	1.00e-34	141.00
IUUC-Aca-004897	Anolis carolinensis	31.07	4.00e-34	140.00
IUUC-Aly-005989	Arabidopsis lyrata	94.35	0.00e+00	1923.00
IUUC-Ago-007942	Ashbya gossypii	22.80	5.00e-10	59.70
IUUC-Acl-008353	Aspergillus clavatus	25.61	3.00e-22	101.00
IUUC-Afl-008409	Aspergillus flavus	26.12	6.00e-24	106.00
IUUC-Afu-008944	Aspergillus fumigatus	25.78	5.00e-22	100.00
IUUC-Ani-009309	Aspergillus nidulans	25.64	9.00e-20	92.80
IUUC-Ang-009872	Aspergillus niger	26.55	1.00e-23	105.00
IUUC-Aor-010054	Aspergillus oryzae	26.12	5.00e-24	106.00
IUUC-Ate-010319	Aspergillus terreus	22.10	3.00e-05	44.70
IUUC-Ame-010972	Astyanax mexicanus	33.33	2.00e-38	154.00
IUUC-Bgr-012036	Blumeria graminis	25.80	1.00e-23	105.00
IUUC-Bta-012491	Bos taurus	31.23	3.00e-36	147.00
IUUC-Bci-013874	Botrytis cinerea	26.68	4.00e-22	100.00
IUUC-Bdi-014094	Brachypodium distachyon	59.77	0.00e+00	885.00
IUUC-Bol-015876	Brassica oleracea	83.61	0.00e+00	1689.00
IUUC-Bra-017155	Brassica rapa	84.32	0.00e+00	1689.00
IUUC-Cja-019928	Callithrix jacchus	29.54	2.00e-34	140.00
IUUC-Cfa-021191	Canis familiaris	29.74	1.00e-35	145.00
IUUC-Cpo-021819	Cavia porcellus	32.57	2.00e-28	122.00
IUUC-Cre-023014	Chlamydomonas reinhardtii	31.10	6.00e-28	117.00
IUUC-Csa-023410	Chlorocebus sabaeus	29.89	4.00e-32	133.00
IUUC-Cho-024387	Choloepus hoffmanni	29.59	4.00e-28	122.00
IUUC-Csv-026336	Ciona savignyi	28.01	6.00e-25	111.00
IUUC-Cgl-026577	Colletotrichum gloeosporioides	22.70	3.00e-11	64.30
IUUC-Cne-026961	Cryptococcus neoformans	29.32	3.00e-14	74.30
IUUC-Dre-027465	Danio rerio	30.96	6.00e-40	159.00
IUUC-Dno-029885	Dasypus novemcinctus	29.52	9.00e-37	149.00
IUUC-Dor-030105	Dipodomys ordii	34.77	5.00e-35	143.00
IUUC-Dse-031213	Dothistroma septosporum	23.97	8.00e-17	82.80
IUUC-Dme-032171	Drosophila melanogaster	30.55	4.00e-26	115.00
IUUC-Ete-033002	Echinops telfairi	30.13	5.00e-34	139.00
IUUC-Eca-034271	Equus caballus	30.63	3.00e-35	143.00
IUUC-Eeu-034921	Erinaceus europaeus	31.08	2.00e-36	147.00
IUUC-Fca-036262	Felis catus	29.40	3.00e-32	135.00
IUUC-Fal-036815	Ficedula albicollis	31.30	4.00e-34	140.00
IUUC-Fox-037821	Fusarium oxysporum	37.69	8.00e-13	69.70
IUUC-Fso-038316	Fusarium solani	30.69	5.00e-13	70.10
IUUC-Gmo-038841	Gadus morhua	32.65	7.00e-37	149.00
IUUC-Ggr-040105	Gaeumannomyces graminis	27.40	2.00e-16	82.00
IUUC-Gga-040756	Gallus gallus	30.16	8.00e-35	142.00
IUUC-Gac-041957	Gasterosteus aculeatus	34.31	3.00e-35	143.00
IUUC-Gma-043801	Glycine max	62.90	0.00e+00	1253.00
IUUC-Ggo-044737	Gorilla gorilla	29.12	6.00e-31	129.00
IUUC-Hsa-046756	Homo sapiens	30.73	3.00e-33	137.00
IUUC-Hvu-047529	Hordeum vulgare	26.74	6.00e-23	102.00
IUUC-Itr-048204	Ictidomys tridecemlineatus	29.34	5.00e-35	143.00
IUUC-Kpa-049110	Komagataella pastoris	31.11	3.90e-02	32.30
IUUC-Lch-049808	Latimeria chalumnae	32.57	2.00e-28	122.00
IUUC-Lpe-050709	Leersia perrieri	55.09	0.00e+00	1055.00
IUUC-Loc-052669	Lepisosteus oculatus	36.18	2.00e-41	164.00
IUUC-Lma-053227	Leptosphaeria maculans	25.78	1.00e-20	95.50
IUUC-Laf-053898	Loxodonta africana	31.14	3.00e-34	140.00
IUUC-Mcc-055614	Macaca mulatta	29.98	3.00e-31	130.00
IUUC-Mor-056973	Magnaporthe oryzae	28.37	3.00e-15	77.80
IUUC-Mpo-057627	Magnaporthe poae	27.64	3.00e-16	80.90
IUUC-Mtr-058718	Medicago truncatula	61.48	0.00e+00	1250.00
IUUC-Mla-058948	Melampsora laricipopulina	26.00	5.00e-22	100.00
IUUC-Mga-059344	Meleagris gallopavo	30.39	4.00e-35	143.00
IUUC-Mvi-060265	Microbotryum violaceum	23.58	2.00e-15	77.80
IUUC-Mmr-061025	Microcebus murinus	29.28	2.00e-30	128.00
IUUC-Mdo-061884	Monodelphis domestica	30.62	4.00e-36	146.00
IUUC-Mmu-063492	Mus musculus	30.18	3.00e-31	130.00
IUUC-Mac-065442	Musa acuminata	57.05	0.00e+00	1117.00
IUUC-Mpu-065714	Mustela putorius furo	30.56	2.00e-35	144.00
IUUC-Mlu-068229	Myotis lucifugus	29.27	7.00e-34	139.00
IUUC-Nfi-068585	Neosartorya fischeri	25.50	2.00e-19	91.70
IUUC-Ncr-068789	Neurospora crassa	34.62	5.00e-10	60.50
IUUC-Nle-070017	Nomascus leucogenys	30.34	8.00e-34	139.00
IUUC-Ont-071686	Oreochromis niloticus	34.09	1.00e-35	145.00
IUUC-Oan-073539	Ornithorhynchus anatinus	29.96	9.00e-35	142.00
IUUC-Ocu-074076	Oryctolagus cuniculus	31.01	3.00e-35	144.00
IUUC-Oba-075204	Oryza barthii	54.75	0.00e+00	1062.00
IUUC-Obr-076797	Oryza brachyantha	56.08	0.00e+00	1039.00
IUUC-Ogl-077619	Oryza glaberrima	54.60	0.00e+00	1073.00
IUUC-Ogu-078961	Oryza glumaepatula	54.49	0.00e+00	1073.00
IUUC-Oin-079261	Oryza indica	54.69	0.00e+00	1071.00
IUUC-Olo-080829	Oryza longistaminata	54.67	0.00e+00	1073.00
IUUC-Ome-081599	Oryza meridionalis	54.66	0.00e+00	1072.00
IUUC-Oni-082029	Oryza nivara	54.60	0.00e+00	1067.00
IUUC-Opu-083657	Oryza punctata	54.87	0.00e+00	1058.00
IUUC-Oru-084765	Oryza rufipogon	54.69	0.00e+00	1071.00
IUUC-Osa-086136	Oryza sativa	61.07	0.00e+00	900.00
IUUC-Ola-087419	Oryzias latipes	34.78	3.00e-40	160.00
IUUC-Olu-087836	Ostreococcus lucimarinus	27.66	7.00e-20	90.50
IUUC-Oga-088885	Otolemur garnettii	29.35	7.00e-31	129.00
IUUC-Oar-090361	Ovis aries	30.98	4.00e-35	143.00
IUUC-Ptr-091424	Pan troglodytes	29.89	4.00e-33	137.00
IUUC-Pan-092557	Papio anubis	29.89	5.00e-32	133.00
IUUC-Psi-093980	Pelodiscus sinensis	32.68	3.00e-37	150.00
IUUC-Pma-094275	Petromyzon marinus	27.48	1.00e-23	105.00
IUUC-Pno-094989	Phaeosphaeria nodorum	24.69	9.00e-15	76.30
IUUC-Ppa-095929	Physcomitrella patens	55.97	0.00e+00	816.00
IUUC-Pfo-096296	Poecilia formosa	35.77	5.00e-37	149.00
IUUC-Pab-097552	Pongo abelii	30.11	2.00e-33	138.00
IUUC-Pop-099124	Populus trichocarpa	63.90	0.00e+00	1315.00
IUUC-Ppe-101574	Prunus persica	62.75	0.00e+00	1227.00
IUUC-Pva-102906	Pteropus vampyrus	31.31	4.00e-35	143.00
IUUC-Pgr-103405	Puccinia graminis	28.99	2.00e-23	105.00
IUUC-Ptt-103743	Puccinia triticina	30.38	4.00e-30	127.00
IUUC-Pte-104407	Pyrenophora teres	25.49	1.00e-20	95.90
IUUC-Pyt-104646	Pyrenophora triticirepentis	25.30	4.00e-20	94.00
IUUC-Rno-105458	Rattus norvegicus	29.13	4.00e-32	135.00
IUUC-Sha-106797	Sarcophilus harrisii	30.11	1.00e-34	142.00
IUUC-Sja-107740	Schizosaccharomyces japonicus	29.14	3.00e-32	133.00
IUUC-Spo-108090	Schizosaccharomyces pombe	29.53	5.00e-30	126.00
IUUC-Ssl-108513	Sclerotinia sclerotiorum	25.52	9.00e-19	89.40
IUUC-Smo-109576	Selaginella moellendorffii	45.47	0.00e+00	797.00
IUUC-Sit-110676	Setaria italica	61.05	0.00e+00	919.00
IUUC-Sly-111572	Solanum lycopersicum	65.53	0.00e+00	953.00
IUUC-Stu-112166	Solanum tuberosum	27.49	1.00e-22	102.00
IUUC-Sar-113437	Sorex araneus	29.98	5.00e-37	149.00
IUUC-Sbi-114124	Sorghum bicolor	54.70	0.00e+00	1048.00
IUUC-Sre-114999	Sporisorium reilianum	25.75	1.00e-23	105.00
IUUC-Ssc-116088	Sus scrofa	28.89	3.00e-32	134.00
IUUC-Tgu-116854	Taeniopygia guttata	29.52	2.00e-32	134.00
IUUC-Tru-117552	Takifugu rubripes	32.86	1.00e-39	158.00
IUUC-Tsy-119521	Tarsius syrichta	32.00	2.00e-21	97.80
IUUC-Tni-119891	Tetraodon nigroviridis	31.38	7.00e-38	152.00
IUUC-Tca-121015	Theobroma cacao	66.67	0.00e+00	1319.00
IUUC-Tre-122202	Trichoderma reesei	35.10	1.00e-12	69.30
IUUC-Tvi-122439	Trichoderma virens	32.45	7.00e-11	63.20
IUUC-Tae-123606	Triticum aestivum	60.55	0.00e+00	847.00
IUUC-Tur-126077	Triticum urartu	59.35	0.00e+00	836.00
IUUC-Tme-127029	Tuber melanosporum	27.39	4.00e-17	83.60
IUUC-Tbe-127811	Tupaia belangeri	36.07	3.00e-30	127.00
IUUC-Ttr-128273	Tursiops truncatus	29.13	9.00e-32	134.00
IUUC-Uma-129427	Ustilago maydis	26.49	2.00e-24	107.00
IUUC-Vda-129791	Verticillium dahliae	24.84	7.00e-17	83.20
IUUC-Vpa-130558	Vicugna pacos	30.79	4.00e-35	143.00
IUUC-Vvi-131602	Vitis vinifera	65.74	0.00e+00	1297.00
IUUC-Xtr-131965	Xenopus tropicalis	30.77	2.00e-34	141.00
IUUC-Xma-133569	Xiphophorus maculatus	35.52	1.00e-36	148.00
IUUC-Yli-134409	Yarrowia lipolytica	33.64	6.00e-19	89.70
IUUC-Zma-135450	Zea mays	54.19	0.00e+00	1031.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence