iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-059241

Ensembl Protein ID

ENSMGAP00000006487.2

UniProt Accession

G1N3Z6; G1N3Z6_MELGA

Protein Name

Uncharacterized protein

Gene Name

TNRC6A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000006455.2	ENSMGAT00000007240.2	ENSMGAP00000006487.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	35.45	6.00e-33	141.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

SRELEAKATK EVERKLSRDL VQEEEEQLME ERKKRKEDKK KKEAAQKKAI EQKIKAESYW 60
KIASVRFQKA ATNKRVKVGW KVNNNHIRSC MSCQRSTSWQ SPEEPAEQIP VLTSALQPQQ 120

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Nucleotide Sequence
(Fasta)

TCCAGAGAAT TGGAAGCTAA AGCTACCAAA GAAGTCGAAA GAAAACTAAG CAGGTAAGAT 60
GCTTGAATCC CTTCCTGAGC GCAGAGCGTG GGTCAGCCTA GGGCTGGAAG CACTGTGGGT 120

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Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033501--TNRC6A

Pfam

PF10427--Ago_hook
PF16608--TNRC6-PABC_bdg

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0035068--C:micro-ribonucleoprotein complex
GO:0005654--C:nucleoplasm
GO:0000932--C:P-body
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0035278--P:miRNA mediated inhibition of translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	82.76	0.00e+00	2435.00
IUUC-Apl-003191	Anas platyrhynchos	39.87	5.00e-145	509.00
IUUC-Aca-004717	Anolis carolinensis	41.33	2.00e-108	387.00
IUUC-Ame-010681	Astyanax mexicanus	43.36	1.00e-74	275.00
IUUC-Bta-012915	Bos taurus	79.56	0.00e+00	2276.00
IUUC-Cja-019614	Callithrix jacchus	37.60	1.00e-94	342.00
IUUC-Cfa-020452	Canis familiaris	80.54	0.00e+00	2364.00
IUUC-Cpo-021452	Cavia porcellus	41.63	5.00e-105	376.00
IUUC-Csa-023169	Chlorocebus sabaeus	81.84	0.00e+00	2405.00
IUUC-Cho-024655	Choloepus hoffmanni	78.54	0.00e+00	1278.00
IUUC-Dre-028059	Danio rerio	50.51	2.00e-81	298.00
IUUC-Dno-029734	Dasypus novemcinctus	81.46	0.00e+00	2416.00
IUUC-Dor-030671	Dipodomys ordii	84.86	0.00e+00	1684.00
IUUC-Dme-032014	Drosophila melanogaster	34.48	1.00e-28	122.00
IUUC-Ete-032774	Echinops telfairi	47.36	4.00e-87	317.00
IUUC-Eca-033866	Equus caballus	47.25	5.00e-85	310.00
IUUC-Eeu-034572	Erinaceus europaeus	46.00	6.00e-43	170.00
IUUC-Fal-036856	Ficedula albicollis	38.83	2.00e-105	377.00
IUUC-Gga-040531	Gallus gallus	41.16	5.00e-105	376.00
IUUC-Gac-041681	Gasterosteus aculeatus	45.65	7.00e-78	286.00
IUUC-Ggo-045143	Gorilla gorilla	38.23	3.00e-94	340.00
IUUC-Hsa-045913	Homo sapiens	47.85	3.00e-86	313.00
IUUC-Lch-049619	Latimeria chalumnae	73.54	0.00e+00	2250.00
IUUC-Loc-052289	Lepisosteus oculatus	50.83	3.00e-88	320.00
IUUC-Laf-053607	Loxodonta africana	38.26	1.00e-122	434.00
IUUC-Mcc-055342	Macaca mulatta	37.84	1.00e-92	335.00
IUUC-Meu-056275	Macropus eugenii	88.73	0.00e+00	1335.00
IUUC-Mmr-061348	Microcebus murinus	80.43	0.00e+00	2356.00
IUUC-Mdo-062155	Monodelphis domestica	38.65	8.00e-134	472.00
IUUC-Mmu-064259	Mus musculus	82.78	0.00e+00	1830.00
IUUC-Mpu-066534	Mustela putorius furo	71.03	0.00e+00	1984.00
IUUC-Mlu-067834	Myotis lucifugus	80.43	0.00e+00	2427.00
IUUC-Nle-069168	Nomascus leucogenys	81.35	0.00e+00	2399.00
IUUC-Opr-070976	Ochotona princeps	40.86	1.00e-65	245.00
IUUC-Ocu-073749	Oryctolagus cuniculus	80.00	0.00e+00	2326.00
IUUC-Oga-088116	Otolemur garnettii	82.13	0.00e+00	2442.00
IUUC-Oar-090041	Ovis aries	80.34	0.00e+00	2201.00
IUUC-Ptr-091135	Pan troglodytes	38.05	6.00e-90	326.00
IUUC-Pan-092665	Papio anubis	37.58	8.00e-91	328.00
IUUC-Psi-093057	Pelodiscus sinensis	40.77	1.00e-102	368.00
IUUC-Pma-094508	Petromyzon marinus	43.52	5.00e-42	165.00
IUUC-Pfo-097115	Poecilia formosa	39.23	7.00e-32	132.00
IUUC-Pab-097935	Pongo abelii	81.57	0.00e+00	2410.00
IUUC-Pca-100481	Procavia capensis	46.30	5.00e-81	296.00
IUUC-Pva-102376	Pteropus vampyrus	41.06	4.00e-64	240.00
IUUC-Rno-105508	Rattus norvegicus	78.54	0.00e+00	2295.00
IUUC-Sar-113036	Sorex araneus	49.07	6.00e-40	159.00
IUUC-Ssc-115574	Sus scrofa	48.08	5.00e-66	246.00
IUUC-Tgu-117233	Taeniopygia guttata	38.52	1.00e-118	421.00
IUUC-Tru-117725	Takifugu rubripes	46.86	4.00e-86	313.00
IUUC-Tsy-118786	Tarsius syrichta	43.39	5.00e-61	230.00
IUUC-Tbe-127551	Tupaia belangeri	80.22	0.00e+00	2255.00
IUUC-Ttr-128518	Tursiops truncatus	47.41	8.00e-90	325.00
IUUC-Vpa-130230	Vicugna pacos	75.69	0.00e+00	991.00
IUUC-Xtr-132265	Xenopus tropicalis	36.25	8.00e-98	352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence