iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ggo-044940

UUCD1 version

UUC-GoG-00559

Ensembl Protein ID

ENSGGOP00000013835.2

UniProt Accession

G3RE60; G3RE60_GORGO

Protein Name

Uncharacterized protein

Gene Name

RNF168

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000014184.2	ENSGGOT00000014234.2	ENSGGOP00000013835.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/MIU	3.70e-12	46.0	57	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/MIU

   S: 1    rqkQprtDlELAqqLQqEeyqqfa 24
           +++Q+++D+ELA++L+ +++++++
   Q: 57   MEEQLKSDEELARKLSVDINNFCE 80
           89********************97 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

DSHQLFHQKR KIIGNVAAER RASEEEENKA SEEYIQRLLA EEEEEEKRQA EKRRRAMEEQ 60
LKSDEELARK LSVDINNFCE GSISASPLNS RKSDPVTPKS EKKSKNKQRN TGDIQKYLTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATAGTCATC AGCTATTTCA TATCAAAAAA GAAAATAACA TTATAGGCAA CACAATTTTA 60
TGGTAACTTT GGTCTTCCAT TAAAACGAAA AATTAAAATA TACAACTATT AATAACTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0035861--C:site of double-strand break
GO:0000151--C:ubiquitin ligase complex
GO:0031491--F:nucleosome binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006302--P:double-strand break repair
GO:0070535--P:histone H2A K63-linked ubiquitination
GO:0035518--P:histone H2A monoubiquitination
GO:0036351--P:histone H2A-K13 ubiquitination
GO:0036352--P:histone H2A-K15 ubiquitination
GO:0034244--P:negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045739--P:positive regulation of DNA repair
GO:0010212--P:response to ionizing radiation
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001573	Ailuropoda melanoleuca	72.32	6.00e-147	514.00
IUUC-Apl-003963	Anas platyrhynchos	35.20	8.00e-16	78.60
IUUC-Aca-004420	Anolis carolinensis	40.93	1.00e-23	104.00
IUUC-Bta-013002	Bos taurus	71.01	2.00e-148	519.00
IUUC-Cja-019945	Callithrix jacchus	82.54	2.00e-175	608.00
IUUC-Cfa-020533	Canis familiaris	72.64	2.00e-148	519.00
IUUC-Cpo-021643	Cavia porcellus	53.43	1.00e-87	317.00
IUUC-Csa-023638	Chlorocebus sabaeus	87.00	0.00e+00	700.00
IUUC-Cho-024319	Choloepus hoffmanni	68.81	5.00e-129	454.00
IUUC-Dno-029294	Dasypus novemcinctus	70.17	8.00e-141	493.00
IUUC-Ete-032714	Echinops telfairi	52.21	2.00e-87	316.00
IUUC-Eca-033343	Equus caballus	72.42	9.00e-144	503.00
IUUC-Eeu-034633	Erinaceus europaeus	35.32	2.00e-33	136.00
IUUC-Fca-036251	Felis catus	71.93	1.00e-148	519.00
IUUC-Fal-037048	Ficedula albicollis	37.03	4.00e-30	126.00
IUUC-Gga-040444	Gallus gallus	34.88	7.00e-20	92.00
IUUC-Hsa-046424	Homo sapiens	98.25	0.00e+00	740.00
IUUC-Itr-048965	Ictidomys tridecemlineatus	68.75	7.00e-138	484.00
IUUC-Lch-050649	Latimeria chalumnae	28.10	8.00e-13	68.20
IUUC-Laf-053938	Loxodonta africana	67.89	3.00e-147	515.00
IUUC-Mcc-055360	Macaca mulatta	85.75	0.00e+00	686.00
IUUC-Meu-056684	Macropus eugenii	43.69	5.00e-68	251.00
IUUC-Mga-059699	Meleagris gallopavo	32.49	5.00e-21	95.90
IUUC-Mmr-060779	Microcebus murinus	73.38	7.00e-164	570.00
IUUC-Mdo-062225	Monodelphis domestica	46.02	6.00e-66	244.00
IUUC-Mmu-064239	Mus musculus	55.75	2.00e-102	366.00
IUUC-Mac-065144	Musa acuminata	32.43	1.40e+00	26.60
IUUC-Mpu-066141	Mustela putorius furo	71.50	9.00e-146	510.00
IUUC-Mlu-067945	Myotis lucifugus	72.82	3.00e-154	538.00
IUUC-Nle-069769	Nomascus leucogenys	95.00	0.00e+00	746.00
IUUC-Opr-070905	Ochotona princeps	61.23	2.00e-126	446.00
IUUC-Oan-073531	Ornithorhynchus anatinus	42.28	5.00e-61	228.00
IUUC-Ocu-073832	Oryctolagus cuniculus	63.95	7.00e-122	430.00
IUUC-Oga-088318	Otolemur garnettii	73.88	2.00e-165	575.00
IUUC-Oar-089647	Ovis aries	68.80	2.00e-141	496.00
IUUC-Ptr-090516	Pan troglodytes	98.75	0.00e+00	778.00
IUUC-Pan-092302	Papio anubis	85.25	0.00e+00	690.00
IUUC-Psi-093604	Pelodiscus sinensis	44.22	1.00e-28	121.00
IUUC-Pab-097729	Pongo abelii	95.75	0.00e+00	755.00
IUUC-Pca-100552	Procavia capensis	61.36	1.00e-116	413.00
IUUC-Pva-102780	Pteropus vampyrus	71.78	3.00e-151	528.00
IUUC-Rno-105461	Rattus norvegicus	55.14	4.00e-93	335.00
IUUC-Sha-106809	Sarcophilus harrisii	47.29	6.00e-77	281.00
IUUC-Sar-113579	Sorex araneus	52.13	3.00e-94	338.00
IUUC-Tsy-119217	Tarsius syrichta	51.64	4.00e-59	221.00
IUUC-Tbe-127622	Tupaia belangeri	70.57	1.00e-150	526.00
IUUC-Ttr-128988	Tursiops truncatus	76.31	1.00e-161	562.00
IUUC-Vpa-130302	Vicugna pacos	72.17	2.00e-137	482.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence