iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex
Post-translational Modifications (PTMs)
PHOSIDA
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	1.20e-18	66.3	905	931

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 3    aqWaCsaCTflNePeavkCemCsrpRg 29
            +W C++C  +N+Pe++kC++C++ ++
   Q: 905  KEWECDTCMVRNKPEINKCVACETAKP 931
           68**********************997 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MEDAQEQRES SQAELAKKHP LTPLKELPEE SEEEEEEEDE SSAGALRESD SNNSIMGKMK 60
MRVSSILPAS LSGWFSPSSK DGNDALSSPA NLRQSQPRQS NGRLTTKRKR GRRRIMLAEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACATCGATT TTGGTTCCAG CTCTACTTTG TGGCCACACA CGCGTTTTTT CCCCAATCAA 60
ATCGTGCTCT TTTGAAATTC TGTTTCTTGC AAATCGGTGG TGCGTGTTCT CGTGCAACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR026054--Nucleoporin
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF00641--zf-RanBP

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002141	Ailuropoda melanoleuca	32.36	5.00e-37	150.00
IUUC-Atr-003051	Amborella trichopoda	33.80	7.00e-07	47.40
IUUC-Aca-005186	Anolis carolinensis	35.53	7.00e-38	152.00
IUUC-Ath-007657	Arabidopsis thaliana	27.78	4.00e-06	45.40
IUUC-Ame-011895	Astyanax mexicanus	39.76	1.00e-25	111.00
IUUC-Bta-013564	Bos taurus	35.27	2.00e-33	137.00
IUUC-Bci-013702	Botrytis cinerea	25.32	1.60e-02	33.10
IUUC-Cja-019112	Callithrix jacchus	25.74	1.00e-37	152.00
IUUC-Cfa-020158	Canis familiaris	31.02	1.00e-33	139.00
IUUC-Cpo-022504	Cavia porcellus	36.36	4.00e-33	136.00
IUUC-Csa-023696	Chlorocebus sabaeus	29.74	1.00e-42	169.00
IUUC-Cho-025048	Choloepus hoffmanni	29.73	7.00e-27	115.00
IUUC-Cin-025240	Ciona intestinalis	30.99	3.00e-23	103.00
IUUC-Dre-027637	Danio rerio	33.33	3.00e-33	137.00
IUUC-Dno-029177	Dasypus novemcinctus	24.94	7.00e-33	137.00
IUUC-Dor-030161	Dipodomys ordii	31.29	2.00e-35	145.00
IUUC-Dse-031270	Dothistroma septosporum	25.58	6.00e-03	34.70
IUUC-Ete-032242	Echinops telfairi	32.40	3.00e-22	100.00
IUUC-Eca-034415	Equus caballus	30.99	2.00e-38	155.00
IUUC-Eeu-034837	Erinaceus europaeus	36.24	1.00e-37	151.00
IUUC-Fca-036100	Felis catus	31.84	1.00e-26	115.00
IUUC-Fal-037573	Ficedula albicollis	34.65	7.00e-31	129.00
IUUC-Gmo-038683	Gadus morhua	32.05	3.00e-33	137.00
IUUC-Gga-040987	Gallus gallus	31.09	2.00e-29	124.00
IUUC-Gac-041456	Gasterosteus aculeatus	36.36	1.00e-34	142.00
IUUC-Ggo-045401	Gorilla gorilla	35.32	2.00e-33	137.00
IUUC-Hsa-046168	Homo sapiens	27.46	5.00e-41	164.00
IUUC-Hvu-047699	Hordeum vulgare	31.94	2.00e-06	46.20
IUUC-Itr-049075	Ictidomys tridecemlineatus	29.02	7.00e-35	143.00
IUUC-Lch-049785	Latimeria chalumnae	31.94	2.00e-35	144.00
IUUC-Loc-052225	Lepisosteus oculatus	26.30	1.00e-39	158.00
IUUC-Laf-053667	Loxodonta africana	30.74	2.00e-33	139.00
IUUC-Mcc-055115	Macaca mulatta	29.49	2.00e-44	176.00
IUUC-Meu-056865	Macropus eugenii	46.07	1.00e-19	92.00
IUUC-Mga-059887	Meleagris gallopavo	41.76	3.00e-27	117.00
IUUC-Mmr-061001	Microcebus murinus	30.18	8.00e-44	173.00
IUUC-Mdo-062359	Monodelphis domestica	40.18	3.00e-42	166.00
IUUC-Mmu-063291	Mus musculus	33.08	9.00e-38	153.00
IUUC-Mpu-066696	Mustela putorius furo	34.50	3.00e-32	134.00
IUUC-Mlu-067422	Myotis lucifugus	32.23	2.00e-36	149.00
IUUC-Ncr-068633	Neurospora crassa	39.02	9.40e-02	30.80
IUUC-Nle-069190	Nomascus leucogenys	27.95	9.00e-40	159.00
IUUC-Opr-070420	Ochotona princeps	30.45	1.00e-37	152.00
IUUC-Ont-072146	Oreochromis niloticus	47.71	3.00e-32	134.00
IUUC-Oan-072713	Ornithorhynchus anatinus	40.69	2.00e-39	157.00
IUUC-Ocu-074420	Oryctolagus cuniculus	35.81	3.00e-32	134.00
IUUC-Obr-076781	Oryza brachyantha	34.25	3.00e-07	48.50
IUUC-Ola-086355	Oryzias latipes	33.91	9.00e-30	125.00
IUUC-Oga-088196	Otolemur garnettii	23.93	5.00e-30	127.00
IUUC-Oar-089695	Ovis aries	34.82	8.00e-34	139.00
IUUC-Ptr-091152	Pan troglodytes	27.20	6.00e-41	164.00
IUUC-Pan-091914	Papio anubis	29.49	1.00e-44	176.00
IUUC-Psi-093592	Pelodiscus sinensis	35.55	1.00e-38	154.00
IUUC-Pma-094629	Petromyzon marinus	35.37	6.00e-24	107.00
IUUC-Pfo-097481	Poecilia formosa	35.65	3.00e-35	143.00
IUUC-Pab-097566	Pongo abelii	28.76	4.00e-44	174.00
IUUC-Pca-100141	Procavia capensis	28.62	2.00e-30	129.00
IUUC-Pva-102856	Pteropus vampyrus	33.78	8.00e-32	132.00
IUUC-Rno-105650	Rattus norvegicus	37.05	3.00e-36	147.00
IUUC-Sha-107464	Sarcophilus harrisii	38.81	2.00e-40	160.00
IUUC-Sar-113578	Sorex araneus	34.25	3.00e-29	124.00
IUUC-Ssc-115622	Sus scrofa	29.90	1.00e-29	126.00
IUUC-Tgu-116947	Taeniopygia guttata	37.36	2.00e-28	120.00
IUUC-Tru-117704	Takifugu rubripes	37.02	1.00e-39	158.00
IUUC-Tsy-119514	Tarsius syrichta	34.93	6.00e-34	139.00
IUUC-Tni-120354	Tetraodon nigroviridis	36.21	7.00e-36	145.00
IUUC-Tae-125350	Triticum aestivum	31.94	2.00e-06	46.20
IUUC-Tbe-128064	Tupaia belangeri	34.84	4.00e-29	123.00
IUUC-Vpa-130533	Vicugna pacos	36.11	4.00e-32	133.00
IUUC-Xtr-132016	Xenopus tropicalis	36.57	9.00e-39	155.00
IUUC-Xma-134136	Xiphophorus maculatus	33.78	2.00e-33	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence