iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043274

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000853

Gene Name

LOC100802940; GLYMA_20G190200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA20G33160	GLYMA20G33160.1	GLYMA20G33160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-09	37.4	279	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v++laf s+ +l+++++ D++ik+WDlr++ +l++
   Q: 279  HHGPVSALAFhSNgHLMATAGKDKKIKLWDLRKFEVLQT 317
           8899*******776999****************999875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGEIQESKAL AKSKPSTEQD VTDELDLRMK KYLRGEGANL EGLKDKKLKG QLAVKEDLYG 60
KSAKAAAKAE KWLMPSEGGY LEAEGLEKTW RIKQEAIARE VDISSSGKQY DIILPELGPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACAAATTT TTTGGCATAA ATAAATCGAA ATTAGGCGGC AGTAGACACA TGCAAGGCCA 60
AAATCGTTTA AAACCCCAAA CAAAACCCTG CGACGCCGCT TCTCGTCATC TCTCCTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

gmx:100802940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011572	Astyanax mexicanus	41.11	7.00e-92	331.00
IUUC-Cel-018465	Caenorhabditis elegans	43.66	2.00e-88	320.00
IUUC-Cne-026784	Cryptococcus neoformans	36.41	2.00e-71	263.00
IUUC-Dre-028533	Danio rerio	40.57	5.00e-88	318.00
IUUC-Eeu-034982	Erinaceus europaeus	40.81	1.00e-55	210.00
IUUC-Fso-038154	Fusarium solani	41.65	3.00e-96	345.00
IUUC-Gmo-039548	Gadus morhua	43.06	8.00e-93	334.00
IUUC-Ggr-039976	Gaeumannomyces graminis	39.57	1.00e-97	350.00
IUUC-Gac-042249	Gasterosteus aculeatus	44.47	4.00e-92	332.00
IUUC-Hvu-047436	Hordeum vulgare	64.72	1.00e-127	449.00
IUUC-Kpa-049329	Komagataella pastoris	42.20	1.00e-92	333.00
IUUC-Loc-051736	Lepisosteus oculatus	44.47	7.00e-93	334.00
IUUC-Mtr-058139	Medicago truncatula	82.46	0.00e+00	851.00
IUUC-Mla-059028	Melampsora laricipopulina	41.44	2.00e-81	296.00
IUUC-Mvi-060533	Microbotryum violaceum	43.13	4.00e-88	318.00
IUUC-Ont-071977	Oreochromis niloticus	44.74	6.00e-92	331.00
IUUC-Ola-086667	Oryzias latipes	46.36	7.00e-100	357.00
IUUC-Pma-094742	Petromyzon marinus	40.45	6.00e-83	301.00
IUUC-Pop-099756	Populus trichocarpa	71.14	0.00e+00	746.00
IUUC-Pte-104146	Pyrenophora teres	40.04	4.00e-85	308.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	39.37	9.00e-84	304.00
IUUC-Sce-106227	Saccharomyces cerevisiae	36.38	7.00e-94	337.00
IUUC-Smo-108814	Selaginella moellendorffii	53.62	2.00e-127	449.00
IUUC-Sit-110158	Setaria italica	64.02	7.00e-174	603.00
IUUC-Sly-111569	Solanum lycopersicum	72.68	0.00e+00	707.00
IUUC-Stu-112403	Solanum tuberosum	72.90	0.00e+00	705.00
IUUC-Sbi-114817	Sorghum bicolor	62.62	3.00e-159	555.00
IUUC-Sre-115150	Sporisorium reilianum	43.40	5.00e-90	325.00
IUUC-Tru-118535	Takifugu rubripes	39.77	1.00e-97	350.00
IUUC-Tca-121165	Theobroma cacao	74.14	0.00e+00	778.00
IUUC-Tre-122114	Trichoderma reesei	40.86	5.00e-99	355.00
IUUC-Tme-127208	Tuber melanosporum	43.95	1.00e-104	374.00
IUUC-Uma-129320	Ustilago maydis	43.06	2.00e-89	323.00
IUUC-Vda-129926	Verticillium dahliae	38.91	1.00e-93	337.00
IUUC-Vvi-131643	Vitis vinifera	78.96	0.00e+00	824.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence