iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109586

Ensembl Protein ID

EFJ26826

UniProt Accession

D8RM47; D8RM47_SELML

Genbank Protein ID

EFJ26826.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

GL377583

Gene Name

IAA3-1; SELMODRAFT_172524

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_172524	EFJ26826	EFJ26826

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UFD/PB1	40.32	6.00e-27	113.00	IUUC-Ots-000022

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Selaginella moellendorffii

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTLEAEATGS QAAKEHDYIG LAEQQQPNPL AGKSSSSIKV SAGGLNMRRT ELQLGLPGSP 60
QEDELELQQQ RSNGFRKNGS EQHHGDKEDK GANGSSAKSK PAQPQQPARF GPSVTPDAQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGAAGAGG ATAGGAAGGG AAGCCAGCAG CCATGGCACC CAACAAAATG CCACACCAAA 60
AGTGAATAGT GACTCTTCTG CTGCTACTAC ACACACAAGA ACAAAGAGGA GGAGAAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

smo:SELMODRAFT_172524

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	45.88	6.00e-34	135.00
IUUC-Atr-002534	Amborella trichopoda	50.27	9.00e-43	166.00
IUUC-Apl-003220	Anas platyrhynchos	22.33	5.10e-01	27.70
IUUC-Aca-004830	Anolis carolinensis	28.30	1.00e+00	26.60
IUUC-Aly-005481	Arabidopsis lyrata	50.58	2.00e-41	161.00
IUUC-Ath-007607	Arabidopsis thaliana	50.58	2.00e-41	161.00
IUUC-Bdi-014859	Brachypodium distachyon	48.02	1.00e-35	142.00
IUUC-Bol-015732	Brassica oleracea	50.58	3.00e-41	161.00
IUUC-Bra-017890	Brassica rapa	48.95	8.00e-42	162.00
IUUC-Cin-025204	Ciona intestinalis	29.27	3.80e-01	28.50
IUUC-Csv-025833	Ciona savignyi	32.08	4.40e-01	27.30
IUUC-Dor-030191	Dipodomys ordii	23.66	6.10e-01	27.70
IUUC-Eca-033719	Equus caballus	25.71	7.50e-01	27.30
IUUC-Eeu-035270	Erinaceus europaeus	23.66	3.80e-01	28.50
IUUC-Fca-035804	Felis catus	22.33	7.80e-01	27.30
IUUC-Fal-037426	Ficedula albicollis	28.30	1.50e+00	26.60
IUUC-Gga-040715	Gallus gallus	25.71	9.70e-01	26.90
IUUC-Gac-042366	Gasterosteus aculeatus	38.10	3.30e+00	26.90
IUUC-Gma-043823	Glycine max	34.55	4.00e-42	164.00
IUUC-Hvu-047087	Hordeum vulgare	48.82	2.00e-36	144.00
IUUC-Itr-048521	Ictidomys tridecemlineatus	22.33	7.00e-01	27.70
IUUC-Lch-049822	Latimeria chalumnae	31.25	1.10e+00	26.90
IUUC-Lpe-050724	Leersia perrieri	41.40	2.00e-25	108.00
IUUC-Laf-053735	Loxodonta africana	25.71	7.60e-01	27.30
IUUC-Mtr-058323	Medicago truncatula	50.00	1.00e-40	159.00
IUUC-Mmr-061160	Microcebus murinus	23.66	6.70e-01	27.70
IUUC-Mmu-063654	Mus musculus	36.36	2.40e-02	33.50
IUUC-Mac-064563	Musa acuminata	49.41	1.00e-39	155.00
IUUC-Mlu-067270	Myotis lucifugus	22.33	2.10e-01	29.30
IUUC-Nle-069491	Nomascus leucogenys	22.33	6.40e-01	27.70
IUUC-Oan-073255	Ornithorhynchus anatinus	22.33	5.40e-01	28.10
IUUC-Oba-075945	Oryza barthii	48.35	1.00e-35	142.00
IUUC-Obr-076745	Oryza brachyantha	46.15	4.00e-33	134.00
IUUC-Ogl-077356	Oryza glaberrima	44.71	6.00e-32	129.00
IUUC-Ogu-078911	Oryza glumaepatula	48.35	2.00e-35	141.00
IUUC-Oin-079136	Oryza indica	48.90	2.00e-35	141.00
IUUC-Olo-080519	Oryza longistaminata	41.95	6.00e-29	119.00
IUUC-Ome-081785	Oryza meridionalis	45.29	6.00e-34	136.00
IUUC-Oni-082674	Oryza nivara	48.35	2.00e-35	141.00
IUUC-Opu-083338	Oryza punctata	44.12	1.00e-31	129.00
IUUC-Oru-084731	Oryza rufipogon	44.71	6.00e-32	129.00
IUUC-Osa-086164	Oryza sativa	48.90	2.00e-35	141.00
IUUC-Ptr-091043	Pan troglodytes	22.33	6.10e-01	27.70
IUUC-Psi-093566	Pelodiscus sinensis	23.66	6.20e-01	27.70
IUUC-Ppa-095740	Physcomitrella patens	48.84	9.00e-39	154.00
IUUC-Pop-099102	Populus trichocarpa	50.59	5.00e-42	164.00
IUUC-Ppe-101672	Prunus persica	51.18	2.00e-42	165.00
IUUC-Rno-105080	Rattus norvegicus	36.36	1.00e-02	34.30
IUUC-Sha-106837	Sarcophilus harrisii	25.71	4.40e-01	28.10
IUUC-Sit-110216	Setaria italica	48.09	1.00e-38	152.00
IUUC-Sly-111769	Solanum lycopersicum	48.82	4.00e-37	147.00
IUUC-Stu-112219	Solanum tuberosum	34.75	5.00e-40	157.00
IUUC-Sar-113418	Sorex araneus	36.36	7.60e-02	31.60
IUUC-Sbi-114725	Sorghum bicolor	47.51	1.00e-36	145.00
IUUC-Tgu-117454	Taeniopygia guttata	25.71	9.60e-01	26.90
IUUC-Tsy-119108	Tarsius syrichta	22.33	6.90e-01	27.70
IUUC-Tca-121378	Theobroma cacao	50.00	2.00e-38	152.00
IUUC-Tae-122725	Triticum aestivum	49.17	1.00e-36	145.00
IUUC-Tur-126762	Triticum urartu	44.89	1.00e-32	132.00
IUUC-Vda-129879	Verticillium dahliae	54.17	7.60e+00	25.80
IUUC-Vvi-131708	Vitis vinifera	48.17	2.00e-37	149.00
IUUC-Xtr-132566	Xenopus tropicalis	25.71	5.90e-01	27.70

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence