iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-131803

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01056614

Gene Name

gnb5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000020741.3	ENSXETT00000044829.3	ENSXETP00000044829.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-42	141.4	235	276
UBD/Beta-Prp	2.80e-54	184.5	189	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlrtgvllks 38
           gH ++v cl++    +++++vsG+ D++ +vWD+rtg +++s
   Q: 235  GHGADVLCLDLapseTGNTFVSGGCDKKAMVWDMRTGQCIQS 276
           8***********9644499********************996 PP

UBD/Beta-Prp

   S: 46   rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..sgdklvsGshdrtirvwdletgqcleet 132
           +s+  h++  +a++f +++  ++t+s D+t  +wd+++g+ +++++gh ++vl+l++ p  +g+++vsG+ d+ ++vwd++tgqc++  
   Q: 189  KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPseTGNTFVSGGCDKKAMVWDMRTGQCIQ-S 276
           567889999*********99***************************************9777************************.* PP
   S: 133  lsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
           ++ h++ +n+v++ p+g+ ++sGs+D  +rl+dl+ ++ +    ++       s++f+ +g+ l +g +d t+++wd+ +g+ v +l g
   Q: 277  FETHESDINSVRYYPSGDAFASGSDDASCRLYDLRADREVAIYsKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGTRVSILFG 365
           ******************************************95333556778999********************************* PP
   S: 221  htdnvksvrfspnderlvsgssDgsiriW 249
           h++ v+ +r+sp+++ + sgs D ++riW
   Q: 366  HENRVSTLRVSPDGTAFCSGSWDHTLRIW 394
           ***************************** PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MCDQTFLTVL FGPCGKCKRE RPLRTIYVKA EPVTYCSLCV EMMATEGLQE NETLASLKNE 60
AESLKEKLEE ERAKLHDVEL HQVAERVESL GQFVMKTRRT LKGHGNKVLC MDWCKDKRRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGCGATC AAACCTTTTT AACTGTCCTT TTTGGGCCGT GTGGCAAATG CAAGAGAGAA 60
AGACCGCTAA GGACAATTTA TGTCAAAGCA GAGCCAGTAA CGTACTGTTC GTTATGTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001811	Ailuropoda melanoleuca	85.06	0.00e+00	710.00
IUUC-Apl-003399	Anas platyrhynchos	97.76	0.00e+00	645.00
IUUC-Aca-004861	Anolis carolinensis	94.68	0.00e+00	762.00
IUUC-Ame-011851	Astyanax mexicanus	92.31	0.00e+00	669.00
IUUC-Bta-012438	Bos taurus	96.03	0.00e+00	696.00
IUUC-Cel-018408	Caenorhabditis elegans	64.93	8.00e-135	473.00
IUUC-Cja-019086	Callithrix jacchus	91.86	0.00e+00	746.00
IUUC-Cfa-021255	Canis familiaris	89.82	0.00e+00	714.00
IUUC-Cpo-021398	Cavia porcellus	90.15	0.00e+00	737.00
IUUC-Csa-023776	Chlorocebus sabaeus	96.60	0.00e+00	699.00
IUUC-Cin-025305	Ciona intestinalis	58.74	4.00e-128	450.00
IUUC-Csv-026058	Ciona savignyi	57.33	1.00e-124	439.00
IUUC-Dre-028432	Danio rerio	86.84	0.00e+00	696.00
IUUC-Dno-029958	Dasypus novemcinctus	77.59	5.00e-131	459.00
IUUC-Dor-031013	Dipodomys ordii	96.88	3.00e-151	527.00
IUUC-Dme-031889	Drosophila melanogaster	68.60	1.00e-143	502.00
IUUC-Ete-033033	Echinops telfairi	64.03	4.00e-141	494.00
IUUC-Eca-033977	Equus caballus	87.34	0.00e+00	716.00
IUUC-Eeu-035079	Erinaceus europaeus	90.31	0.00e+00	731.00
IUUC-Fca-035693	Felis catus	85.39	0.00e+00	712.00
IUUC-Fal-037345	Ficedula albicollis	97.17	0.00e+00	701.00
IUUC-Gmo-039222	Gadus morhua	90.53	0.00e+00	662.00
IUUC-Gga-040320	Gallus gallus	97.73	0.00e+00	703.00
IUUC-Gac-042644	Gasterosteus aculeatus	91.57	0.00e+00	674.00
IUUC-Ggo-044489	Gorilla gorilla	88.13	0.00e+00	725.00
IUUC-Hsa-046434	Homo sapiens	91.90	0.00e+00	751.00
IUUC-Itr-048771	Ictidomys tridecemlineatus	92.09	4.00e-175	606.00
IUUC-Loc-052790	Lepisosteus oculatus	92.60	0.00e+00	744.00
IUUC-Laf-054255	Loxodonta africana	90.33	0.00e+00	736.00
IUUC-Mcc-055610	Macaca mulatta	91.60	0.00e+00	743.00
IUUC-Meu-056819	Macropus eugenii	81.12	0.00e+00	659.00
IUUC-Mga-059740	Meleagris gallopavo	86.78	0.00e+00	720.00
IUUC-Mmr-061221	Microcebus murinus	91.65	0.00e+00	747.00
IUUC-Mdo-062619	Monodelphis domestica	96.60	0.00e+00	699.00
IUUC-Mmu-064266	Mus musculus	91.39	0.00e+00	748.00
IUUC-Mpu-065766	Mustela putorius furo	97.01	2.00e-179	620.00
IUUC-Mlu-067221	Myotis lucifugus	84.63	0.00e+00	698.00
IUUC-Nle-069515	Nomascus leucogenys	97.15	0.00e+00	652.00
IUUC-Opr-070195	Ochotona princeps	83.72	0.00e+00	659.00
IUUC-Ont-071535	Oreochromis niloticus	80.76	1.00e-176	612.00
IUUC-Oan-072899	Ornithorhynchus anatinus	97.30	9.00e-107	378.00
IUUC-Ocu-074666	Oryctolagus cuniculus	97.67	9.00e-180	622.00
IUUC-Ola-086578	Oryzias latipes	92.90	0.00e+00	653.00
IUUC-Oga-089090	Otolemur garnettii	91.18	0.00e+00	743.00
IUUC-Oar-090017	Ovis aries	85.79	0.00e+00	700.00
IUUC-Ptr-091280	Pan troglodytes	83.04	0.00e+00	682.00
IUUC-Pan-092198	Papio anubis	96.54	0.00e+00	652.00
IUUC-Psi-093030	Pelodiscus sinensis	84.33	0.00e+00	719.00
IUUC-Pma-094140	Petromyzon marinus	82.16	8.00e-99	352.00
IUUC-Pfo-097182	Poecilia formosa	92.42	0.00e+00	669.00
IUUC-Pab-098157	Pongo abelii	96.88	0.00e+00	701.00
IUUC-Pca-100988	Procavia capensis	70.13	1.00e-151	529.00
IUUC-Pva-102232	Pteropus vampyrus	84.00	4.00e-167	580.00
IUUC-Rno-105526	Rattus norvegicus	92.68	0.00e+00	659.00
IUUC-Sha-106754	Sarcophilus harrisii	91.65	0.00e+00	725.00
IUUC-Ssc-115390	Sus scrofa	91.67	0.00e+00	746.00
IUUC-Tgu-117377	Taeniopygia guttata	84.99	0.00e+00	692.00
IUUC-Tru-117938	Takifugu rubripes	93.48	0.00e+00	657.00
IUUC-Tsy-119392	Tarsius syrichta	76.71	8.00e-174	602.00
IUUC-Tni-119834	Tetraodon nigroviridis	75.44	5.00e-172	596.00
IUUC-Tbe-127469	Tupaia belangeri	90.43	0.00e+00	684.00
IUUC-Ttr-128252	Tursiops truncatus	89.39	0.00e+00	714.00
IUUC-Vpa-130173	Vicugna pacos	74.11	3.00e-147	514.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence