iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115715

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU856599

Gene Name

TRIM5; LOC733579

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000014670.3	ENSSSCT00000016021.3	ENSSSCP00000015599.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-10	39.3	15	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl..qkwpglknssskefrCPlCr 46
           C+iCle +k+ pl+l+CgH f++dCl  +    ++    ++ +CP+Cr
   Q: 15   CPICLELLKE-PLSLDCGHSFCQDCLtvNSK-KSMMGLEGKSNCPVCR 60
           ********99.**************976333.56778888889****8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MASGILENIR EEVTCPICLE LLKEPLSLDC GHSFCQDCLT VNSKKSMMGL EGKSNCPVCR 60
VSYQPGNLRL NRHVANIVER LRKVSLSPEV EQKGNLCVHH EEKLLFFCKE DGKVICWICE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTTTCGTT TTCCTTCAGC TGCCGCGGCA GGTCTTCTGG GTGGAGCCCG AGGTCAGTGA 60
GTGGATCTGA GCCCATCTGC CCAGGCCCTC CGGTCCTTCT TCTCAGTATT GAAGAACACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR032917--TRIM5
IPR015943--WD40/YVTN_repeat-like_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0006914--P:autophagy
GO:0051607--P:defense response to virus
GO:0045087--P:innate immune response

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001965	Ailuropoda melanoleuca	52.83	2.00e-142	498.00
IUUC-Bta-013110	Bos taurus	62.05	4.00e-173	600.00
IUUC-Cja-019944	Callithrix jacchus	55.87	4.00e-139	487.00
IUUC-Csa-023785	Chlorocebus sabaeus	55.91	5.00e-156	543.00
IUUC-Cho-024416	Choloepus hoffmanni	61.09	2.00e-88	319.00
IUUC-Dor-030700	Dipodomys ordii	49.39	5.00e-130	457.00
IUUC-Ete-033021	Echinops telfairi	50.00	1.00e-109	389.00
IUUC-Eca-034235	Equus caballus	62.70	1.00e-173	602.00
IUUC-Eeu-034968	Erinaceus europaeus	49.56	2.00e-116	412.00
IUUC-Fca-035533	Felis catus	52.31	3.00e-143	501.00
IUUC-Ggo-044783	Gorilla gorilla	58.23	4.00e-148	517.00
IUUC-Hsa-046573	Homo sapiens	58.25	1.00e-150	526.00
IUUC-Itr-048069	Ictidomys tridecemlineatus	51.15	7.00e-131	460.00
IUUC-Laf-054486	Loxodonta africana	53.96	5.00e-150	523.00
IUUC-Mcc-054743	Macaca mulatta	55.31	3.00e-153	534.00
IUUC-Mmr-061336	Microcebus murinus	56.97	7.00e-140	490.00
IUUC-Mmu-063682	Mus musculus	53.85	5.00e-143	500.00
IUUC-Mpu-065842	Mustela putorius furo	52.34	9.00e-142	496.00
IUUC-Mlu-067695	Myotis lucifugus	58.65	3.00e-152	531.00
IUUC-Nle-068980	Nomascus leucogenys	54.11	7.00e-150	523.00
IUUC-Opr-071057	Ochotona princeps	51.94	2.00e-130	458.00
IUUC-Oga-088267	Otolemur garnettii	53.13	1.00e-137	482.00
IUUC-Oar-090073	Ovis aries	62.25	9.00e-162	563.00
IUUC-Ptr-090927	Pan troglodytes	58.25	1.00e-149	522.00
IUUC-Pan-092730	Papio anubis	56.92	9.00e-158	549.00
IUUC-Ppa-095948	Physcomitrella patens	40.91	1.00e-08	51.60
IUUC-Pab-098782	Pongo abelii	57.49	5.00e-148	517.00
IUUC-Rno-105401	Rattus norvegicus	53.64	5.00e-143	500.00
IUUC-Sar-113094	Sorex araneus	48.98	3.00e-109	388.00
IUUC-Tsy-119330	Tarsius syrichta	51.73	5.00e-135	473.00
IUUC-Tbe-127426	Tupaia belangeri	52.91	3.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence