iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108823

Ensembl Protein ID

EFJ11993

UniProt Accession

D8SUF1; D8SUF1_SELML

Genbank Protein ID

EFJ11993.1

Protein Name

Chlorophyll a-b binding protein, chloroplastic

Genbank Nucleotide ID

GL377642

Gene Name

Lhcb2-1; SELMODRAFT_158381

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_158381	EFJ11993	EFJ11993

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	33.96	8.60e-01	32.00	IUUC-Hsa-046409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Selaginella moellendorffii

Functional Description
(View)

The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.

Protein Sequence
(Fasta)

MAASASAISS SSFSGQTALK SPNELSRKVG NLGEARTVMR RTRASTPDSI WYGPDRPKFL 60
GPFSEQTPSY LTGEFPGDYG WDTAGLSADP ETFAKNRELE VIHSRWAMLG ALGCVTPELL 120

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Nucleotide Sequence
(Fasta)

CAAACGCTCA GCCTCCATCG CCCTCGCTGT GCTTGCTCTA TTCTTCGTCT TCCTTTCTTC 60
GTCTTAACCT TAGATATGGC GGCGTCGGCT TCGGCGATCA GCAGCTCCTC CTTCTCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0148--Chlorophyll
KW-0150--Chloroplast
KW-0157--Chromophore
KW-0181--Complete proteome
KW-0472--Membrane
KW-0602--Photosynthesis
KW-0603--Photosystem I
KW-0604--Photosystem II
KW-0934--Plastid
KW-1185--Reference proteome
KW-0793--Thylakoid
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001344--Chloro_AB-bd_pln
IPR022796--Chloroa_b-bind
IPR023329--Chlorophyll_a/b-bd_dom

Pfam

PF00504--Chloroa_b-bind

Gene Ontology

GO:0009535--C:chloroplast thylakoid membrane
GO:0016021--C:integral component of membrane
GO:0009522--C:photosystem I
GO:0009523--C:photosystem II
GO:0016168--F:chlorophyll binding
GO:0009765--P:photosynthesis, light harvesting
GO:0018298--P:protein-chromophore linkage

KEGG

smo:SELMODRAFT_158381

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001911	Ailuropoda melanoleuca	33.96	6.20e-02	31.60
IUUC-Apl-004035	Anas platyrhynchos	33.96	8.90e-02	31.20
IUUC-Aca-004782	Anolis carolinensis	33.96	8.80e-02	31.20
IUUC-Ang-009733	Aspergillus niger	26.15	5.80e+00	23.10
IUUC-Ame-011790	Astyanax mexicanus	33.96	5.80e-02	31.60
IUUC-Bta-012579	Bos taurus	33.96	3.90e-02	32.00
IUUC-Cja-019528	Callithrix jacchus	33.96	5.50e-02	32.00
IUUC-Cfa-020678	Canis familiaris	33.96	5.20e-02	32.00
IUUC-Cpo-021947	Cavia porcellus	33.96	6.00e-02	31.60
IUUC-Csa-023935	Chlorocebus sabaeus	33.96	5.70e-02	31.60
IUUC-Cho-024477	Choloepus hoffmanni	33.96	4.60e-02	32.00
IUUC-Dre-027636	Danio rerio	33.96	5.80e-02	31.60
IUUC-Dno-029048	Dasypus novemcinctus	33.96	5.90e-02	31.60
IUUC-Dor-030401	Dipodomys ordii	33.96	5.60e-02	31.60
IUUC-Eca-033825	Equus caballus	33.96	5.90e-02	31.60
IUUC-Eeu-035018	Erinaceus europaeus	24.39	4.60e+00	29.30
IUUC-Fca-036253	Felis catus	33.96	6.90e-02	31.60
IUUC-Fal-037614	Ficedula albicollis	33.96	7.70e-02	31.20
IUUC-Gmo-038928	Gadus morhua	32.08	3.50e-01	29.30
IUUC-Gga-040177	Gallus gallus	33.96	9.40e-02	31.20
IUUC-Gac-042263	Gasterosteus aculeatus	33.96	1.10e-01	30.80
IUUC-Ggo-045288	Gorilla gorilla	33.96	5.50e-02	32.00
IUUC-Hsa-046409	Homo sapiens	33.96	5.40e-02	32.00
IUUC-Itr-048996	Ictidomys tridecemlineatus	33.96	6.50e-02	31.60
IUUC-Lch-050354	Latimeria chalumnae	33.96	8.70e-02	31.20
IUUC-Loc-052319	Lepisosteus oculatus	33.96	5.50e-02	31.60
IUUC-Laf-054070	Loxodonta africana	33.96	6.00e-02	31.60
IUUC-Mcc-055339	Macaca mulatta	35.85	1.50e-02	33.50
IUUC-Meu-055917	Macropus eugenii	33.96	7.40e-02	31.20
IUUC-Mor-056988	Magnaporthe oryzae	34.78	5.50e+00	25.80
IUUC-Mga-059273	Meleagris gallopavo	33.96	9.90e-02	30.80
IUUC-Mmr-061597	Microcebus murinus	33.96	5.80e-02	31.60
IUUC-Mmu-063374	Mus musculus	33.96	4.70e-02	32.00
IUUC-Mpu-065967	Mustela putorius furo	33.96	5.70e-02	32.00
IUUC-Mlu-067532	Myotis lucifugus	33.96	5.70e-02	31.60
IUUC-Nle-069373	Nomascus leucogenys	33.96	5.30e-02	32.00
IUUC-Opr-070873	Ochotona princeps	33.96	6.20e-02	31.60
IUUC-Ont-072498	Oreochromis niloticus	33.96	5.30e-02	32.00
IUUC-Ocu-073870	Oryctolagus cuniculus	33.96	5.50e-02	32.00
IUUC-Ola-086866	Oryzias latipes	33.96	3.40e-02	30.80
IUUC-Oga-089057	Otolemur garnettii	33.96	5.90e-02	31.60
IUUC-Oar-090013	Ovis aries	33.96	3.70e-02	32.00
IUUC-Ptr-091054	Pan troglodytes	33.96	5.30e-02	32.00
IUUC-Ppa-095577	Physcomitrella patens	38.89	2.00e-28	118.00
IUUC-Pfo-097179	Poecilia formosa	33.96	4.40e-02	32.00
IUUC-Pab-097702	Pongo abelii	33.96	5.40e-02	32.00
IUUC-Pca-100671	Procavia capensis	33.96	5.10e-02	32.00
IUUC-Rno-106044	Rattus norvegicus	33.96	4.80e-02	32.00
IUUC-Sha-107139	Sarcophilus harrisii	33.96	7.20e-02	31.20
IUUC-Sar-113759	Sorex araneus	23.61	5.80e+00	28.90
IUUC-Sbi-114200	Sorghum bicolor	37.16	2.00e-28	119.00
IUUC-Ssc-115343	Sus scrofa	33.96	5.30e-02	32.00
IUUC-Tgu-117061	Taeniopygia guttata	33.96	8.40e-02	31.20
IUUC-Tni-119829	Tetraodon nigroviridis	33.96	4.90e-02	32.00
IUUC-Ttr-129148	Tursiops truncatus	33.96	6.20e-02	31.60
IUUC-Vpa-130780	Vicugna pacos	33.96	5.40e-02	32.00
IUUC-Vvi-130966	Vitis vinifera	87.70	1.00e-130	457.00
IUUC-Xtr-132513	Xenopus tropicalis	33.96	9.90e-02	30.80

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence