iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000023883.13	ENSMUST00000024657.11	ENSMUSP00000024657.5
ENSMUSG00000023883.13	ENSMUST00000168938.2	ENSMUSP00000125917.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	microRNA	TRANSFAC	RepTar
miRNAMap	RAID2
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
CPLM	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.90e-13	50.9	433	479

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           k C +Cg+++++e +++ C+ C++ +H  C++l      p+   wiC  C++
   Q: 433  KTCIICGQPHHEE-EMMFCDVCDRGYHTFCVGLG---AIPSGR-WICDCCQR 479
           78*********88.5*******************...999996.******86 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MAAAGPGAAL SPGRCDSDPA SPGAQSPKDD NEDNSNDGTH PCKRRRMGSG DSSRSCETSS 60
QDLSFSYYPA ENLIEYKWPP DETGEYYMLQ EQVSEYLGVT SFKRKYPDLE RRDLSHKEKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGCAGCG GCGGCGGCGG CGGCCGCTGG GACTAGGCGA AGGCGGCGAC GACGACGGAG 60
GCGCGGGGCG CTTGGGCTGA TGGCAGCGGC CGGGCCCGGG GCGGCGCTGT CCCCGGGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

mmu:72057

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001967	Ailuropoda melanoleuca	95.95	0.00e+00	821.00
IUUC-Apl-003184	Anas platyrhynchos	89.57	0.00e+00	698.00
IUUC-Aca-005357	Anolis carolinensis	84.73	0.00e+00	758.00
IUUC-Ame-011482	Astyanax mexicanus	81.82	1.00e-114	407.00
IUUC-Bta-013488	Bos taurus	92.20	0.00e+00	636.00
IUUC-Cel-018612	Caenorhabditis elegans	32.39	8.00e-60	224.00
IUUC-Cja-018959	Callithrix jacchus	94.23	0.00e+00	826.00
IUUC-Cfa-020275	Canis familiaris	95.87	0.00e+00	799.00
IUUC-Cpo-021997	Cavia porcellus	96.59	0.00e+00	742.00
IUUC-Csa-024058	Chlorocebus sabaeus	97.12	0.00e+00	817.00
IUUC-Cin-025585	Ciona intestinalis	54.05	3.00e-66	246.00
IUUC-Csv-026176	Ciona savignyi	52.25	6.00e-63	235.00
IUUC-Dre-027911	Danio rerio	81.95	9.00e-118	417.00
IUUC-Dno-028846	Dasypus novemcinctus	96.17	0.00e+00	828.00
IUUC-Dor-030929	Dipodomys ordii	95.85	0.00e+00	731.00
IUUC-Dme-032114	Drosophila melanogaster	31.03	4.00e-32	134.00
IUUC-Ete-032648	Echinops telfairi	90.53	2.00e-93	335.00
IUUC-Eca-034382	Equus caballus	95.37	0.00e+00	726.00
IUUC-Eeu-035027	Erinaceus europaeus	94.63	0.00e+00	725.00
IUUC-Fca-036040	Felis catus	93.33	0.00e+00	756.00
IUUC-Fal-037535	Ficedula albicollis	86.72	0.00e+00	776.00
IUUC-Gmo-038527	Gadus morhua	72.20	3.00e-146	511.00
IUUC-Gga-040769	Gallus gallus	92.70	5.00e-135	474.00
IUUC-Gac-042584	Gasterosteus aculeatus	70.91	1.00e-148	519.00
IUUC-Ggo-045145	Gorilla gorilla	96.59	0.00e+00	729.00
IUUC-Hsa-047029	Homo sapiens	96.31	0.00e+00	852.00
IUUC-Itr-047896	Ictidomys tridecemlineatus	96.16	0.00e+00	818.00
IUUC-Lch-050598	Latimeria chalumnae	69.10	2.00e-172	599.00
IUUC-Loc-052902	Lepisosteus oculatus	80.69	0.00e+00	661.00
IUUC-Laf-053764	Loxodonta africana	91.04	0.00e+00	672.00
IUUC-Mcc-055088	Macaca mulatta	93.17	0.00e+00	829.00
IUUC-Meu-056586	Macropus eugenii	95.28	9.00e-67	247.00
IUUC-Mga-059912	Meleagris gallopavo	79.87	0.00e+00	647.00
IUUC-Mmr-061508	Microcebus murinus	93.98	0.00e+00	840.00
IUUC-Mdo-062561	Monodelphis domestica	93.70	0.00e+00	818.00
IUUC-Mpu-066775	Mustela putorius furo	95.12	0.00e+00	727.00
IUUC-Mlu-067747	Myotis lucifugus	93.93	0.00e+00	778.00
IUUC-Nle-069553	Nomascus leucogenys	96.12	0.00e+00	884.00
IUUC-Opr-071037	Ochotona princeps	70.87	3.00e-74	270.00
IUUC-Ont-072137	Oreochromis niloticus	73.25	2.00e-174	605.00
IUUC-Oan-073733	Ornithorhynchus anatinus	94.01	0.00e+00	799.00
IUUC-Ocu-074802	Oryctolagus cuniculus	94.03	0.00e+00	773.00
IUUC-Ola-086309	Oryzias latipes	73.85	4.00e-151	527.00
IUUC-Oga-088663	Otolemur garnettii	94.96	0.00e+00	857.00
IUUC-Oar-089478	Ovis aries	91.77	0.00e+00	757.00
IUUC-Ptr-091474	Pan troglodytes	96.48	0.00e+00	841.00
IUUC-Pan-092456	Papio anubis	94.97	0.00e+00	846.00
IUUC-Psi-093676	Pelodiscus sinensis	89.71	0.00e+00	764.00
IUUC-Pfo-096908	Poecilia formosa	73.58	3.00e-174	604.00
IUUC-Pab-097820	Pongo abelii	95.36	0.00e+00	859.00
IUUC-Pca-100174	Procavia capensis	91.50	0.00e+00	671.00
IUUC-Pva-102571	Pteropus vampyrus	83.17	1.00e-171	595.00
IUUC-Rno-105400	Rattus norvegicus	99.51	0.00e+00	756.00
IUUC-Sha-107024	Sarcophilus harrisii	94.32	0.00e+00	787.00
IUUC-Ssc-115799	Sus scrofa	86.14	0.00e+00	719.00
IUUC-Tgu-116658	Taeniopygia guttata	91.71	0.00e+00	694.00
IUUC-Tru-118269	Takifugu rubripes	62.14	4.00e-134	471.00
IUUC-Tsy-119389	Tarsius syrichta	94.88	0.00e+00	690.00
IUUC-Tni-119914	Tetraodon nigroviridis	71.39	3.00e-143	501.00
IUUC-Tbe-128154	Tupaia belangeri	81.27	0.00e+00	663.00
IUUC-Ttr-129016	Tursiops truncatus	94.87	0.00e+00	701.00
IUUC-Xtr-132371	Xenopus tropicalis	69.70	4.00e-167	581.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence