iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057699

Ensembl Protein ID

AES62449

UniProt Accession

G7IDZ6; G7IDZ6_MEDTR

Genbank Protein ID

AES62449.1

Protein Name

SCF ubiquitin ligase, SKP1 component

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g099870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g099870	AES62449	AES62449

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	9.30e-30	104.0	54	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+ VadmikgktpeeiRktFni+nDftp Ee++vR EnqWA
   Q: 54   KGLLDLTCQIVADMIKGKTPEEIRKTFNIKNDFTPKEEEEVRWENQWA 101
           89*********************************************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MVIDYCKKHV DATAASSDEK PSEDDLKNWD AEFVKVDQAT LFDLILAANY LDIKGLLDLT 60
CQIVADMIKG KTPEEIRKTF NIKNDFTPKE EEEVRWENQW AFE 103

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Nucleotide Sequence
(Fasta)

ATGGTGATTG ATTACTGTAA GAAGCATGTC GATGCTACTG CTGCGAGTTC TGATGAAAAA 60
CCTTCAGAAG ATGATCTTAA GAATTGGGAT GCTGAATTCG TGAAGGTTGA TCAGGCTACG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR001232--SKP1-like
IPR016072--Skp1_comp_dimer

Pfam

PF01466--Skp1

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_1g099870

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Eeu-034817	Erinaceus europaeus	73.17	2.00e-13	66.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence