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Tag Content
UUCD2 ID IUUC-Ppa-095351
UUCD1 version UUC-PhP-00400
Ensembl Protein ID PP1S34_155V6.1
UniProt Accession A9RXF8; A9RXF8_PHYPA
Genbank Protein ID EDQ76259.1
Protein Name Predicted protein
Genbank Nucleotide ID DS544923
Gene Name PHYPADRAFT_179087
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S34_155V6 PP1S34_155V6.1 PP1S34_155V6.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.70e-42 141.7 127 165
UBD/Beta-Prp 1.60e-77 261.4 83 335
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtds+ +laf +d  ll+sG+ Dg + +WD +tg+l +
   Q: 127  GHTDSIASLAFsHDgQLLASGGLDGIVNIWDSSTGTLKQ 165
           8***********888****************99998876 PP
   

   UBD/Beta-Prp
   S: 7    ghhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
           + hk+++++v++   d+ l+atg+ d+ + vw+v +    ++l gh++ ++++ fs+dg++l++g+ D+++++wd stg+  ++l+g  + +  +
   Q: 83   TGHKGPVYSVACsPTDTGLVATGGGDDVTYVWRVGDAESHKQLGGHTDSIASLAFSHDGQLLASGGLDGIVNIWDSSTGTLKQKLEGPGEAIEWV 177
           456777778888466888***************************************************************************** PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg..htdsvyslsfdsngk 193
           +++p g++l++Gs+d t+ +w+ +t  c+  +lsgh+g+v+c  + pdg+ + +Gs D+  r+W+ k+g+  r  +g   ht+  ++l+++ +++
   Q: 178  KWHPRGHVLLAGSEDVTAWLWNADTAACMA-VLSGHSGAVTCGDFTPDGKTICTGSEDGSFRVWNPKSGESTRVVQGHpfHTEGLTCLAISNDST 271
           ******************************.********************************************7644499************* PP
   S: 194  elvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
             ++gs+d+   ++++qtg++  tl +h++ v sv fs+  +++++g++Dg + iWdl++ +  
   Q: 272  IALTGSTDNNACIVNIQTGRVHGTLAEHSKSVESVGFSSGLNLVATGAMDGKLIIWDLQTLQSR 335
           ***********************************************************98865 PP
   
Organism Physcomitrella patens
Protein Sequence
(Fasta)
MTVPSSRLPQ DQADEDEGPM FVNNAEVLHE YEVDEEDLPE ADDDGDDDGD GGDDDHKGDP 60
DDFDMDLAGD GFPEHDDSVH TFTGHKGPVY SVACSPTDTG LVATGGGDDV TYVWRVGDAE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ppa-095351|E3,WD_repeat;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTGGAGTCGC GATAGATCCC TAAATGCCCT GCCTCAATTG CTCTCCCCCT AAGCCAAATC 60
CATTGCTCCC GGCTCTGATT GTGTGCGAAA TTTCGTCCCG CAAGTGGGTA TTTTGGTTCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ppa-095351|E3,WD_repeat;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis
KEGG ppp:PHYPADRAFT_179087
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000794 Aegilops tauschii 49.69 2.00e-96 345.00
IUUC-Aml-001781 Ailuropoda melanoleuca 38.00 1.00e-66 246.00
IUUC-Atr-003169 Amborella trichopoda 55.49 8.00e-115 405.00
IUUC-Apl-003939 Anas platyrhynchos 29.31 9.00e-33 133.00
IUUC-Aca-004594 Anolis carolinensis 37.04 2.00e-64 239.00
IUUC-Aly-006277 Arabidopsis lyrata 51.62 5.00e-99 353.00
IUUC-Ath-007701 Arabidopsis thaliana 56.08 2.00e-111 394.00
IUUC-Ame-011651 Astyanax mexicanus 34.08 9.00e-56 210.00
IUUC-Bta-012833 Bos taurus 38.29 7.00e-67 246.00
IUUC-Bdi-014289 Brachypodium distachyon 51.18 2.00e-102 365.00
IUUC-Bol-015313 Brassica oleracea 51.87 3.00e-110 390.00
IUUC-Bra-017115 Brassica rapa 53.41 7.00e-99 353.00
IUUC-Cel-018305 Caenorhabditis elegans 25.93 3.00e-26 112.00
IUUC-Cja-019433 Callithrix jacchus 38.00 8.00e-66 243.00
IUUC-Cfa-020093 Canis familiaris 37.71 9.00e-67 246.00
IUUC-Cpo-021742 Cavia porcellus 38.00 8.00e-66 243.00
IUUC-Cre-022781 Chlamydomonas reinhardtii 48.41 2.00e-86 311.00
IUUC-Csa-023498 Chlorocebus sabaeus 38.00 5.00e-66 244.00
IUUC-Cho-024628 Choloepus hoffmanni 36.65 6.00e-46 177.00
IUUC-Cin-025244 Ciona intestinalis 35.34 2.00e-51 195.00
IUUC-Csv-026218 Ciona savignyi 34.75 4.00e-52 197.00
IUUC-Cne-026911 Cryptococcus neoformans 30.82 2.00e-36 146.00
IUUC-Dre-028528 Danio rerio 36.60 2.00e-61 228.00
IUUC-Dno-029297 Dasypus novemcinctus 37.43 2.00e-65 241.00
IUUC-Dme-031587 Drosophila melanogaster 27.91 2.00e-33 135.00
IUUC-Ete-033100 Echinops telfairi 38.46 1.00e-37 149.00
IUUC-Eca-034277 Equus caballus 37.43 8.00e-66 243.00
IUUC-Eeu-035052 Erinaceus europaeus 37.50 3.00e-34 138.00
IUUC-Fca-036115 Felis catus 38.29 2.00e-67 248.00
IUUC-Fal-036864 Ficedula albicollis 38.94 8.00e-71 259.00
IUUC-Gmo-039090 Gadus morhua 34.43 2.00e-41 162.00
IUUC-Gga-040545 Gallus gallus 39.22 2.00e-71 262.00
IUUC-Gac-042027 Gasterosteus aculeatus 39.77 8.00e-69 253.00
IUUC-Gma-044168 Glycine max 56.42 7.00e-111 392.00
IUUC-Ggo-045036 Gorilla gorilla 38.00 9.00e-66 243.00
IUUC-Hsa-046749 Homo sapiens 38.00 9.00e-66 243.00
IUUC-Hvu-047217 Hordeum vulgare 49.40 3.00e-99 354.00
IUUC-Itr-048114 Ictidomys tridecemlineatus 38.00 7.00e-66 243.00
IUUC-Kpa-049147 Komagataella pastoris 26.94 2.00e-29 122.00
IUUC-Lch-049747 Latimeria chalumnae 37.00 5.00e-58 217.00
IUUC-Lpe-051433 Leersia perrieri 49.41 1.00e-101 362.00
IUUC-Loc-052406 Lepisosteus oculatus 40.29 8.00e-70 256.00
IUUC-Laf-053901 Loxodonta africana 38.00 1.00e-65 243.00
IUUC-Mcc-054990 Macaca mulatta 38.00 1.00e-65 243.00
IUUC-Meu-056844 Macropus eugenii 38.86 1.00e-65 243.00
IUUC-Mtr-057759 Medicago truncatula 55.39 4.00e-103 367.00
IUUC-Mla-058856 Melampsora laricipopulina 31.53 5.00e-49 187.00
IUUC-Mga-059749 Meleagris gallopavo 38.48 4.00e-70 257.00
IUUC-Mvi-060237 Microbotryum violaceum 34.60 5.00e-59 221.00
IUUC-Mmr-061270 Microcebus murinus 36.24 1.00e-62 232.00
IUUC-Mdo-062965 Monodelphis domestica 37.71 4.00e-66 244.00
IUUC-Mmu-064081 Mus musculus 38.00 2.00e-66 245.00
IUUC-Mac-065236 Musa acuminata 55.90 8.00e-113 399.00
IUUC-Mpu-066355 Mustela putorius furo 38.00 9.00e-67 246.00
IUUC-Mlu-067630 Myotis lucifugus 37.61 5.00e-65 241.00
IUUC-Nle-069701 Nomascus leucogenys 38.00 8.00e-66 243.00
IUUC-Opr-070337 Ochotona princeps 34.57 1.00e-57 216.00
IUUC-Ont-072614 Oreochromis niloticus 40.06 1.00e-68 253.00
IUUC-Ocu-073912 Oryctolagus cuniculus 38.00 3.00e-66 245.00
IUUC-Oba-075195 Oryza barthii 52.63 3.00e-105 374.00
IUUC-Obr-076059 Oryza brachyantha 51.64 6.00e-106 376.00
IUUC-Ogl-077318 Oryza glaberrima 51.64 3.00e-107 380.00
IUUC-Ogu-078579 Oryza glumaepatula 52.78 4.00e-106 377.00
IUUC-Oin-079340 Oryza indica 51.64 3.00e-107 380.00
IUUC-Olo-080813 Oryza longistaminata 52.47 4.00e-105 374.00
IUUC-Ome-081420 Oryza meridionalis 53.25 6.00e-106 376.00
IUUC-Oni-082650 Oryza nivara 52.63 3.00e-105 374.00
IUUC-Opu-083832 Oryza punctata 52.63 7.00e-104 369.00
IUUC-Oru-084207 Oryza rufipogon 52.63 3.00e-105 374.00
IUUC-Osa-085708 Oryza sativa 51.64 3.00e-107 380.00
IUUC-Ola-087164 Oryzias latipes 40.35 1.00e-68 253.00
IUUC-Olu-087824 Ostreococcus lucimarinus 47.81 4.00e-76 277.00
IUUC-Oga-088864 Otolemur garnettii 38.00 6.00e-66 243.00
IUUC-Oar-090115 Ovis aries 38.29 2.00e-66 245.00
IUUC-Ptr-091398 Pan troglodytes 38.00 8.00e-66 243.00
IUUC-Pan-092002 Papio anubis 38.00 7.00e-66 243.00
IUUC-Pma-094618 Petromyzon marinus 35.50 2.00e-63 235.00
IUUC-Pfo-097078 Poecilia formosa 40.35 2.00e-67 248.00
IUUC-Pab-098540 Pongo abelii 38.00 8.00e-66 243.00
IUUC-Pop-099140 Populus trichocarpa 59.10 1.00e-117 415.00
IUUC-Pca-101072 Procavia capensis 37.09 1.00e-61 229.00
IUUC-Ppe-101979 Prunus persica 56.72 3.00e-112 397.00
IUUC-Pva-102400 Pteropus vampyrus 33.15 2.00e-52 199.00
IUUC-Pgr-103362 Puccinia graminis 31.94 7.00e-51 193.00
IUUC-Ptt-103756 Puccinia triticina 32.37 1.00e-35 143.00
IUUC-Rno-105672 Rattus norvegicus 37.71 7.00e-66 243.00
IUUC-Sja-107693 Schizosaccharomyces japonicus 33.53 3.00e-55 208.00
IUUC-Spo-108208 Schizosaccharomyces pombe 32.95 1.00e-55 209.00
IUUC-Smo-109168 Selaginella moellendorffii 54.02 2.00e-123 434.00
IUUC-Sit-109978 Setaria italica 51.64 2.00e-107 381.00
IUUC-Sly-111316 Solanum lycopersicum 59.05 1.00e-117 415.00
IUUC-Stu-111956 Solanum tuberosum 59.64 2.00e-118 418.00
IUUC-Sbi-114189 Sorghum bicolor 52.84 3.00e-105 374.00
IUUC-Sre-115029 Sporisorium reilianum 38.35 6.00e-59 220.00
IUUC-Ssc-116045 Sus scrofa 33.62 3.00e-45 174.00
IUUC-Tgu-117514 Taeniopygia guttata 38.66 2.00e-70 258.00
IUUC-Tru-117851 Takifugu rubripes 37.75 1.00e-66 246.00
IUUC-Tsy-119140 Tarsius syrichta 34.29 4.00e-54 204.00
IUUC-Tni-120248 Tetraodon nigroviridis 39.12 1.00e-66 246.00
IUUC-Tca-121686 Theobroma cacao 55.49 5.00e-109 386.00
IUUC-Tae-125689 Triticum aestivum 49.40 5.00e-100 357.00
IUUC-Tur-126174 Triticum urartu 49.54 8.00e-97 346.00
IUUC-Tme-127079 Tuber melanosporum 30.73 3.00e-17 82.40
IUUC-Tbe-127476 Tupaia belangeri 38.00 2.00e-34 139.00
IUUC-Ttr-128182 Tursiops truncatus 38.29 7.00e-66 243.00
IUUC-Uma-129624 Ustilago maydis 38.05 1.00e-60 226.00
IUUC-Vpa-130605 Vicugna pacos 35.35 1.00e-49 189.00
IUUC-Vvi-131319 Vitis vinifera 54.14 9.00e-123 432.00
IUUC-Xtr-132193 Xenopus tropicalis 38.55 9.00e-73 266.00
IUUC-Xma-133880 Xiphophorus maculatus 40.35 3.00e-68 251.00
IUUC-Yli-134520 Yarrowia lipolytica 26.05 3.00e-29 122.00
Created Date 25-Jun-2017

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