iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095491

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

SNF2 family DNA-dependent ATPase

Genbank Nucleotide ID

DS545112

Gene Name

CHR1503; PHYPADRAFT_145079

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S223_99V6	PP1S223_99V6.1	PP1S223_99V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-10	42.0	587	630

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           C vCg gge    l++C+ C +++H +Cl ++ +++ p++  w Cp Cr+
   Q: 587  CEVCGIGGE----LLCCDLCPRVYHLECLTPPLKRTPPGK--WVCPTCRD 630
           *********....*******************55555555..******96 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEALEKPKEK RTKSGGPHGI KSKSATVDHA ATHQHVRLRI KLPVSPARNL AGSTKGAKSS 60
TGASVATNHE PATSDPSDHK SGDTEPTSPA PEYQDFSNTS LKELRVTLDF TLSMRILNRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCGC TTGAGAAGCC CAAGGAAAAG CGGACGAAGT CTGGTGGACC TCATGGGATA 60
AAAAGTAAAT CTGCTACGGT GGATCATGCT GCTACTCATC AGCATGTAAG ACTGCGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_145079

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005645	Arabidopsis lyrata	57.81	0.00e+00	930.00
IUUC-Ath-007406	Arabidopsis thaliana	60.50	0.00e+00	971.00
IUUC-Bol-016073	Brassica oleracea	59.57	0.00e+00	957.00
IUUC-Bra-016724	Brassica rapa	59.33	0.00e+00	957.00
IUUC-Eeu-034777	Erinaceus europaeus	35.44	3.00e-117	416.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence