iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003459

Ensembl Protein ID

ENSAPLP00000003418.1

UniProt Accession

U3I847; U3I847_ANAPL

Genbank Protein ID

ENSAPLP00000003418

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01076469

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000003906.1	ENSAPLT00000004019.1	ENSAPLP00000003418.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.50e-73	246.4	107	405

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           +Gl NlgNtC++NS+LQcL+ +p+l++++l+ +++++++e     +  ++++++++ +++ + ++  a++p+++++ l+++ ++f+  +
   Q: 107  VGLYNLGNTCFLNSTLQCLTYTPPLANYMLSlEHNQSCRE-----QGFCMMCTMETHINQALCCTVDAIKPTRVINDLRRIGKHFRFGS 190
           6******************************777777765.....578***************************************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvp 177
           q+Da+Efl++ +d++++++          ++++         + +  ++ +++i+++F+g l+s++kcl+c+ vs ++e fld++l+++
   Q: 191  QEDAHEFLRYTVDAMQKAC----------LNGS--------TKLDRSSQATTIIHQIFGGFLRSRVKCLNCKAVSDTYEAFLDITLDIK 261
           *******************..........3333........3456778999************************************** PP
   S: 178  gkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfc 265
             +     s++ +Le f+k+eel gen y+c+kc+k + a+k++++++ ++vL++ LkRf  + ++++ +k n++       L +++f 
   Q: 262  AVS-----SVTRALELFVKPEELGGENCYKCSKCNKMVPASKRFTIHRSSKVLTISLKRF-ADFTGGKINKTNNYGL---FfLLIKQFS 341
           **9.....9***************************************************.5555555555555555...548888888 PP
   S: 266  tspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           ++      +  k  L+av+vH G +++ GHYv+y+k  +g W++++D +V  ++ ++vl    ++aY+lfY r
   Q: 342  AT------SIIKHALYAVLVHNGiNCHAGHYVCYIKAGNGLWYQMNDANVVRTDIKTVLG---QQAYLLFYIR 405
           87......27899***********************************************...********87 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MTIVNKPKSS KSKKSSSRRS GKSKKPRTKK MKSRTANWGR IPPAEDSNQV SVAQGRGGAI 60
YCRSSEKSKP FAQRDLIIND GIAPPQRILF PPEKICMDWQ QTQSVGVGLY NLGNTCFLNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCATAG TTAACAAACC AAAATCTTCA AAGTCTAAAA AATCATCTTC AAGGCGGTCT 60
GGCAAATCCA AGAAACCGCG TACTAAAAAA ATGAAGTCAC GCACCGCAAA CTGGGGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	37.88	2.00e-66	247.00
IUUC-Aml-002303	Ailuropoda melanoleuca	42.14	0.00e+00	649.00
IUUC-Atr-003102	Amborella trichopoda	44.34	1.00e-75	278.00
IUUC-Aca-004440	Anolis carolinensis	48.50	0.00e+00	884.00
IUUC-Aly-006389	Arabidopsis lyrata	39.94	5.00e-67	248.00
IUUC-Ath-006710	Arabidopsis thaliana	39.61	1.00e-66	247.00
IUUC-Ame-011358	Astyanax mexicanus	59.91	3.00e-150	525.00
IUUC-Bta-012803	Bos taurus	41.75	0.00e+00	741.00
IUUC-Bdi-014036	Brachypodium distachyon	42.90	4.00e-74	272.00
IUUC-Bol-015086	Brassica oleracea	41.88	4.00e-73	269.00
IUUC-Bra-018046	Brassica rapa	41.56	3.00e-73	270.00
IUUC-Cja-019199	Callithrix jacchus	42.60	0.00e+00	753.00
IUUC-Cfa-020597	Canis familiaris	57.78	0.00e+00	674.00
IUUC-Cpo-021945	Cavia porcellus	43.38	0.00e+00	764.00
IUUC-Csa-023485	Chlorocebus sabaeus	55.27	0.00e+00	685.00
IUUC-Cho-024575	Choloepus hoffmanni	54.51	1.00e-145	510.00
IUUC-Cin-025230	Ciona intestinalis	55.29	5.00e-83	300.00
IUUC-Cne-027049	Cryptococcus neoformans	28.92	4.00e-30	125.00
IUUC-Cme-027339	Cyanidioschyzon merolae	33.78	2.00e-53	202.00
IUUC-Dre-028442	Danio rerio	56.96	3.00e-152	532.00
IUUC-Dno-029673	Dasypus novemcinctus	46.10	0.00e+00	857.00
IUUC-Dme-032119	Drosophila melanogaster	37.13	4.00e-55	209.00
IUUC-Ete-033088	Echinops telfairi	64.24	2.00e-130	460.00
IUUC-Eca-033579	Equus caballus	56.58	0.00e+00	680.00
IUUC-Eeu-035019	Erinaceus europaeus	40.19	2.00e-64	239.00
IUUC-Fca-035792	Felis catus	55.78	0.00e+00	650.00
IUUC-Fal-037075	Ficedula albicollis	73.68	0.00e+00	1633.00
IUUC-Gmo-039033	Gadus morhua	52.73	3.00e-131	462.00
IUUC-Gga-040504	Gallus gallus	76.40	0.00e+00	1702.00
IUUC-Gac-042176	Gasterosteus aculeatus	62.92	3.00e-133	469.00
IUUC-Gma-044075	Glycine max	44.66	1.00e-73	271.00
IUUC-Ggo-044798	Gorilla gorilla	52.30	7.00e-177	614.00
IUUC-Hsa-046072	Homo sapiens	43.32	0.00e+00	728.00
IUUC-Hvu-047620	Hordeum vulgare	41.51	1.00e-69	258.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	45.93	0.00e+00	868.00
IUUC-Lch-049867	Latimeria chalumnae	39.45	0.00e+00	719.00
IUUC-Lpe-051574	Leersia perrieri	41.56	6.00e-68	252.00
IUUC-Loc-052621	Lepisosteus oculatus	53.63	2.00e-147	516.00
IUUC-Laf-054330	Loxodonta africana	57.63	0.00e+00	703.00
IUUC-Mcc-054900	Macaca mulatta	61.38	4.00e-134	470.00
IUUC-Meu-056697	Macropus eugenii	61.82	8.00e-125	441.00
IUUC-Mtr-058537	Medicago truncatula	42.81	4.00e-72	265.00
IUUC-Mla-059049	Melampsora laricipopulina	39.51	3.00e-52	199.00
IUUC-Mga-059501	Meleagris gallopavo	69.19	0.00e+00	1500.00
IUUC-Mvi-060547	Microbotryum violaceum	43.03	2.00e-72	266.00
IUUC-Mmr-060864	Microcebus murinus	44.52	0.00e+00	826.00
IUUC-Mdo-062395	Monodelphis domestica	49.92	0.00e+00	1006.00
IUUC-Mmu-064236	Mus musculus	41.56	0.00e+00	731.00
IUUC-Mac-065039	Musa acuminata	42.41	4.00e-73	269.00
IUUC-Mpu-065822	Mustela putorius furo	43.73	0.00e+00	796.00
IUUC-Mlu-067091	Myotis lucifugus	42.82	0.00e+00	727.00
IUUC-Nle-069004	Nomascus leucogenys	55.19	0.00e+00	686.00
IUUC-Opr-071170	Ochotona princeps	38.35	8.00e-154	537.00
IUUC-Ont-071832	Oreochromis niloticus	56.71	4.00e-144	505.00
IUUC-Oan-073711	Ornithorhynchus anatinus	49.42	0.00e+00	968.00
IUUC-Ocu-074596	Oryctolagus cuniculus	59.18	3.00e-173	600.00
IUUC-Oba-075866	Oryza barthii	43.46	8.00e-73	268.00
IUUC-Obr-076408	Oryza brachyantha	43.00	3.00e-73	270.00
IUUC-Ogl-077239	Oryza glaberrima	43.69	7.00e-74	271.00
IUUC-Ogu-078064	Oryza glumaepatula	43.69	5.00e-74	272.00
IUUC-Oin-079157	Oryza indica	43.69	5.00e-74	272.00
IUUC-Olo-080250	Oryza longistaminata	39.76	6.00e-67	249.00
IUUC-Ome-081746	Oryza meridionalis	44.19	2.00e-74	273.00
IUUC-Oni-082339	Oryza nivara	43.69	6.00e-74	272.00
IUUC-Opu-083194	Oryza punctata	43.31	5.00e-74	273.00
IUUC-Oru-085083	Oryza rufipogon	43.69	4.00e-74	272.00
IUUC-Osa-086180	Oryza sativa	43.69	5.00e-74	272.00
IUUC-Ola-087255	Oryzias latipes	62.61	4.00e-133	468.00
IUUC-Olu-087773	Ostreococcus lucimarinus	40.06	2.00e-58	219.00
IUUC-Oga-088641	Otolemur garnettii	44.70	0.00e+00	812.00
IUUC-Oar-089760	Ovis aries	51.93	4.00e-180	625.00
IUUC-Ptr-091445	Pan troglodytes	44.13	0.00e+00	734.00
IUUC-Pan-092484	Papio anubis	55.81	0.00e+00	678.00
IUUC-Psi-093277	Pelodiscus sinensis	52.57	0.00e+00	1067.00
IUUC-Pma-094591	Petromyzon marinus	56.44	3.00e-34	137.00
IUUC-Ppa-095853	Physcomitrella patens	45.79	2.00e-82	300.00
IUUC-Pfo-096469	Poecilia formosa	60.90	5.00e-144	505.00
IUUC-Pab-097794	Pongo abelii	55.64	0.00e+00	684.00
IUUC-Pop-099693	Populus trichocarpa	34.07	2.00e-73	270.00
IUUC-Pca-100117	Procavia capensis	52.63	2.00e-78	287.00
IUUC-Ppe-101678	Prunus persica	41.99	8.00e-72	265.00
IUUC-Pva-103238	Pteropus vampyrus	38.54	0.00e+00	629.00
IUUC-Pgr-103270	Puccinia graminis	41.67	3.00e-62	233.00
IUUC-Ptt-103887	Puccinia triticina	40.73	6.00e-62	231.00
IUUC-Rno-105068	Rattus norvegicus	42.36	0.00e+00	751.00
IUUC-Sha-106713	Sarcophilus harrisii	50.17	0.00e+00	1003.00
IUUC-Sja-107805	Schizosaccharomyces japonicus	38.74	2.00e-61	229.00
IUUC-Spo-108119	Schizosaccharomyces pombe	43.24	3.00e-75	275.00
IUUC-Smo-108727	Selaginella moellendorffii	43.31	2.00e-70	258.00
IUUC-Sit-109895	Setaria italica	42.67	4.00e-73	269.00
IUUC-Sly-111722	Solanum lycopersicum	42.63	5.00e-71	262.00
IUUC-Stu-112912	Solanum tuberosum	42.32	6.00e-70	258.00
IUUC-Sar-113340	Sorex araneus	51.59	4.00e-171	595.00
IUUC-Sbi-114477	Sorghum bicolor	43.65	1.00e-73	271.00
IUUC-Sre-114924	Sporisorium reilianum	35.26	3.00e-54	206.00
IUUC-Ssc-116022	Sus scrofa	61.82	4.00e-123	436.00
IUUC-Tgu-117149	Taeniopygia guttata	73.90	0.00e+00	1604.00
IUUC-Tru-117776	Takifugu rubripes	59.40	4.00e-138	485.00
IUUC-Tsy-118974	Tarsius syrichta	42.68	0.00e+00	798.00
IUUC-Tni-120774	Tetraodon nigroviridis	59.80	3.00e-135	474.00
IUUC-Tca-120936	Theobroma cacao	43.31	2.00e-74	274.00
IUUC-Tae-122827	Triticum aestivum	42.90	2.00e-75	276.00
IUUC-Tur-126014	Triticum urartu	42.39	2.00e-70	260.00
IUUC-Ttr-128764	Tursiops truncatus	39.33	1.00e-173	603.00
IUUC-Uma-129416	Ustilago maydis	36.25	2.00e-57	216.00
IUUC-Vpa-130568	Vicugna pacos	54.87	3.00e-33	137.00
IUUC-Vvi-131535	Vitis vinifera	44.09	3.00e-77	283.00
IUUC-Xtr-132544	Xenopus tropicalis	50.65	1.00e-141	496.00
IUUC-Xma-133131	Xiphophorus maculatus	56.56	2.00e-141	495.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence