iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCP.lC 45
           Ca+C+  ++d pl++pCgHvf+a C+  w        +e +CP  C
   Q: 18   CALCHKVLED-PLTTPCGHVFCAGCVLPW------VVQEGSCPsRC 56
           **********.******************......88888888445 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGFELDRFDG EVDADLKCAL CHKVLEDPLT TPCGHVFCAG CVLPWVVQEG SCPSRCRGRL 60
SAKELNHVLP LKRLILKLDI KCAHAARGCG RVVKLQDLPE HLERCDFAPA RCRHAGCGQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCATGGGT TTCGAGTTGG ACCGCTTCGA CGGTGAAGTG GACCGCTGAT CTGAAGAGTG 60
CGCCCTCTGC CACAAGGTAC TGGAGGACCC GCTGACCACC CCGTGCGGCC ACGTATTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR001293--Znf_TRAF

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50145--ZF_TRAF

Pfam

PF00595--PDZ

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0031594--C:neuromuscular junction
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007528--P:neuromuscular junction development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001910	Ailuropoda melanoleuca	89.68	0.00e+00	1519.00
IUUC-Apl-003623	Anas platyrhynchos	84.99	0.00e+00	1311.00
IUUC-Ame-011171	Astyanax mexicanus	48.57	0.00e+00	715.00
IUUC-Bta-012364	Bos taurus	90.72	0.00e+00	1847.00
IUUC-Cja-019726	Callithrix jacchus	92.62	0.00e+00	1475.00
IUUC-Cpo-021680	Cavia porcellus	92.25	0.00e+00	1861.00
IUUC-Csa-023684	Chlorocebus sabaeus	94.00	0.00e+00	1943.00
IUUC-Cho-024555	Choloepus hoffmanni	74.91	2.00e-106	380.00
IUUC-Dre-027462	Danio rerio	71.23	0.00e+00	1415.00
IUUC-Dno-029974	Dasypus novemcinctus	93.98	2.00e-45	174.00
IUUC-Dor-031125	Dipodomys ordii	89.57	0.00e+00	1732.00
IUUC-Ete-032745	Echinops telfairi	81.68	0.00e+00	877.00
IUUC-Eca-034276	Equus caballus	91.37	0.00e+00	1469.00
IUUC-Fal-037334	Ficedula albicollis	78.50	0.00e+00	1539.00
IUUC-Gmo-038706	Gadus morhua	69.63	0.00e+00	1350.00
IUUC-Gga-040586	Gallus gallus	82.16	0.00e+00	1588.00
IUUC-Gac-041605	Gasterosteus aculeatus	68.16	0.00e+00	1343.00
IUUC-Ggo-044706	Gorilla gorilla	94.00	0.00e+00	1943.00
IUUC-Hsa-046677	Homo sapiens	93.91	0.00e+00	1943.00
IUUC-Itr-048660	Ictidomys tridecemlineatus	88.99	0.00e+00	1781.00
IUUC-Lch-049637	Latimeria chalumnae	68.08	4.00e-128	450.00
IUUC-Loc-052305	Lepisosteus oculatus	74.25	0.00e+00	1506.00
IUUC-Mcc-055573	Macaca mulatta	94.10	0.00e+00	1946.00
IUUC-Meu-056805	Macropus eugenii	81.16	0.00e+00	1629.00
IUUC-Mdo-062581	Monodelphis domestica	85.06	0.00e+00	1729.00
IUUC-Mmu-063597	Mus musculus	98.31	0.00e+00	2012.00
IUUC-Mpu-065685	Mustela putorius furo	92.15	0.00e+00	1421.00
IUUC-Mlu-067150	Myotis lucifugus	74.10	0.00e+00	1023.00
IUUC-Nle-068997	Nomascus leucogenys	94.20	0.00e+00	1917.00
IUUC-Ont-071534	Oreochromis niloticus	69.58	0.00e+00	1349.00
IUUC-Ola-086381	Oryzias latipes	68.50	0.00e+00	1353.00
IUUC-Oga-089068	Otolemur garnettii	94.07	0.00e+00	1895.00
IUUC-Oar-089252	Ovis aries	95.56	2.00e-77	282.00
IUUC-Pan-092366	Papio anubis	94.10	0.00e+00	1947.00
IUUC-Psi-093611	Pelodiscus sinensis	54.90	3.00e-81	294.00
IUUC-Pfo-096576	Poecilia formosa	67.63	5.00e-123	433.00
IUUC-Pab-098239	Pongo abelii	93.91	0.00e+00	1940.00
IUUC-Pca-100484	Procavia capensis	95.16	0.00e+00	857.00
IUUC-Pva-103202	Pteropus vampyrus	52.50	0.00e+00	865.00
IUUC-Tgu-116615	Taeniopygia guttata	79.48	3.00e-108	384.00
IUUC-Tru-118175	Takifugu rubripes	70.35	0.00e+00	1386.00
IUUC-Tsy-119569	Tarsius syrichta	86.21	0.00e+00	1433.00
IUUC-Tbe-127819	Tupaia belangeri	87.83	0.00e+00	1397.00
IUUC-Ttr-128328	Tursiops truncatus	89.69	0.00e+00	1471.00
IUUC-Xtr-132339	Xenopus tropicalis	76.54	0.00e+00	1543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence