iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049619

Ensembl Protein ID

ENSLACP00000007075.1

UniProt Accession

H3ABQ4; H3ABQ4_LATCH

Genbank Protein ID

ENSLACP00000007075

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01093485

Gene Name

TNRC6A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000006277.1	ENSLACT00000007134.1	ENSLACP00000007075.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	34.46	2.00e-33	142.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MPELTKTSCQ LQPANPNSGT STPASTNSNA KRASANNPQQ ALPRYPREVP PRFRHQEQKQ 60
LLKRGQQLPA IAANLGSGAK VANSQLGGGD IGTSAKPAAN GQLIYNSKNK TDLNHSGLGS 120

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Nucleotide Sequence
(Fasta)

ATGCCAGAAC TAACAAAGAC CAGTTGCCAG CTTCAGCCTG CCAACCCTAA CAGTGGCACG 60
TCTACACCAG CCAGCACCAA TAGCAATGCC AAGCGGGCCT CAGCCAACAA TCCGCAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033501--TNRC6A

Pfam

PF10427--Ago_hook
PF16608--TNRC6-PABC_bdg

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0000289--P:nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	70.88	0.00e+00	2064.00
IUUC-Apl-003191	Anas platyrhynchos	43.96	0.00e+00	883.00
IUUC-Aca-004717	Anolis carolinensis	43.39	0.00e+00	882.00
IUUC-Ame-010681	Astyanax mexicanus	44.42	1.00e-78	288.00
IUUC-Bta-012915	Bos taurus	67.81	0.00e+00	1904.00
IUUC-Bci-013976	Botrytis cinerea	30.43	1.40e-01	31.60
IUUC-Cja-019614	Callithrix jacchus	38.71	1.00e-111	398.00
IUUC-Cfa-020452	Canis familiaris	69.00	0.00e+00	1989.00
IUUC-Cpo-021452	Cavia porcellus	39.81	0.00e+00	732.00
IUUC-Csa-023169	Chlorocebus sabaeus	70.76	0.00e+00	2039.00
IUUC-Cho-024655	Choloepus hoffmanni	67.38	0.00e+00	1585.00
IUUC-Dre-028059	Danio rerio	49.18	3.00e-85	310.00
IUUC-Dno-029734	Dasypus novemcinctus	69.36	0.00e+00	2022.00
IUUC-Dor-030671	Dipodomys ordii	73.10	0.00e+00	1485.00
IUUC-Dme-032014	Drosophila melanogaster	33.42	6.00e-28	120.00
IUUC-Ete-032774	Echinops telfairi	48.09	3.00e-93	337.00
IUUC-Eca-033866	Equus caballus	41.04	0.00e+00	671.00
IUUC-Eeu-034572	Erinaceus europaeus	47.77	9.00e-47	182.00
IUUC-Fal-036856	Ficedula albicollis	42.43	0.00e+00	691.00
IUUC-Gga-040531	Gallus gallus	42.29	0.00e+00	818.00
IUUC-Gac-041681	Gasterosteus aculeatus	45.53	1.00e-82	302.00
IUUC-Ggo-045143	Gorilla gorilla	39.24	6.00e-112	399.00
IUUC-Hsa-045913	Homo sapiens	39.18	2.00e-111	398.00
IUUC-Loc-052289	Lepisosteus oculatus	51.26	4.00e-88	320.00
IUUC-Laf-053607	Loxodonta africana	39.33	3.00e-134	473.00
IUUC-Mcc-055342	Macaca mulatta	38.60	4.00e-106	380.00
IUUC-Meu-056275	Macropus eugenii	76.17	0.00e+00	1167.00
IUUC-Mga-059241	Meleagris gallopavo	74.83	0.00e+00	2248.00
IUUC-Mmr-061348	Microcebus murinus	68.79	0.00e+00	1994.00
IUUC-Mdo-062155	Monodelphis domestica	40.48	3.00e-144	506.00
IUUC-Mmu-064259	Mus musculus	72.20	0.00e+00	1613.00
IUUC-Mpu-066534	Mustela putorius furo	61.64	0.00e+00	1634.00
IUUC-Mlu-067834	Myotis lucifugus	69.74	0.00e+00	2084.00
IUUC-Nle-069168	Nomascus leucogenys	70.38	0.00e+00	2028.00
IUUC-Opr-070976	Ochotona princeps	35.52	2.00e-88	321.00
IUUC-Ocu-073749	Oryctolagus cuniculus	69.04	0.00e+00	1971.00
IUUC-Oga-088116	Otolemur garnettii	70.63	0.00e+00	2067.00
IUUC-Oar-090041	Ovis aries	68.10	0.00e+00	1841.00
IUUC-Ptr-091135	Pan troglodytes	38.19	2.00e-106	380.00
IUUC-Pan-092665	Papio anubis	38.70	2.00e-106	381.00
IUUC-Psi-093057	Pelodiscus sinensis	42.44	0.00e+00	715.00
IUUC-Pma-094508	Petromyzon marinus	43.61	1.00e-42	168.00
IUUC-Pfo-097115	Poecilia formosa	41.28	2.00e-38	154.00
IUUC-Pab-097935	Pongo abelii	70.27	0.00e+00	2017.00
IUUC-Pca-100481	Procavia capensis	48.83	8.00e-88	319.00
IUUC-Pva-102376	Pteropus vampyrus	43.59	3.00e-66	247.00
IUUC-Rno-105508	Rattus norvegicus	67.99	0.00e+00	1967.00
IUUC-Sar-113036	Sorex araneus	45.04	2.00e-43	171.00
IUUC-Ssc-115574	Sus scrofa	50.36	2.00e-69	258.00
IUUC-Tgu-117233	Taeniopygia guttata	42.14	0.00e+00	701.00
IUUC-Tru-117725	Takifugu rubripes	46.25	2.00e-82	301.00
IUUC-Tsy-118786	Tarsius syrichta	47.11	4.00e-64	240.00
IUUC-Tbe-127551	Tupaia belangeri	68.51	0.00e+00	1912.00
IUUC-Ttr-128518	Tursiops truncatus	41.24	0.00e+00	727.00
IUUC-Vpa-130230	Vicugna pacos	64.64	0.00e+00	831.00
IUUC-Xtr-132265	Xenopus tropicalis	37.28	1.00e-100	361.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence