iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093057

Ensembl Protein ID

ENSPSIP00000020415.1

UniProt Accession

K7GJF4; K7GJF4_PELSI

Genbank Protein ID

ENSPSIP00000020415

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01085893

Gene Name

TNRC6C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000018069.1	ENSPSIT00000020512.1	ENSPSIP00000020415.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	42.34	8.00e-32	137.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

SEASCSWDKV IIDRTDKEAW PSITGTETES ASECTTETDS ASNCGSENSS MATGSAPGNF 60
TGHTKKTNGN NGANGALIQS TSNQSALGAG GANGNGNSAR VWGVATGSTS GLAYCSASGG 120

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Nucleotide Sequence
(Fasta)

AGTGAAGCCA GCTGCAGCTG GGATAAAGTG ATAATAGACA GGACTGACAA GGAGGCGTGG 60
CCTTCCATTA CAGGAACTGA GACTGAATCT GCTTCAGAAT GTACTACAGA AACTGACTCT 120

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Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	41.14	0.00e+00	783.00
IUUC-Apl-003191	Anas platyrhynchos	87.17	0.00e+00	2363.00
IUUC-Aca-004717	Anolis carolinensis	87.77	0.00e+00	2411.00
IUUC-Ame-010681	Astyanax mexicanus	52.22	0.00e+00	852.00
IUUC-Bta-012915	Bos taurus	36.60	2.00e-103	371.00
IUUC-Cja-019614	Callithrix jacchus	83.62	0.00e+00	2055.00
IUUC-Cfa-020452	Canis familiaris	36.66	1.00e-112	402.00
IUUC-Cpo-021452	Cavia porcellus	83.68	0.00e+00	2216.00
IUUC-Csa-023169	Chlorocebus sabaeus	40.59	0.00e+00	775.00
IUUC-Cho-024655	Choloepus hoffmanni	41.70	1.00e-125	444.00
IUUC-Dre-028059	Danio rerio	57.27	0.00e+00	1113.00
IUUC-Dno-029734	Dasypus novemcinctus	40.05	0.00e+00	764.00
IUUC-Dor-030671	Dipodomys ordii	43.77	0.00e+00	674.00
IUUC-Dme-032014	Drosophila melanogaster	39.13	1.00e-30	129.00
IUUC-Ete-032774	Echinops telfairi	78.28	0.00e+00	1380.00
IUUC-Eca-033866	Equus caballus	84.78	0.00e+00	2049.00
IUUC-Eeu-034572	Erinaceus europaeus	62.87	4.00e-41	164.00
IUUC-Fal-036856	Ficedula albicollis	86.77	0.00e+00	2122.00
IUUC-Gga-040531	Gallus gallus	91.51	0.00e+00	2367.00
IUUC-Gac-041681	Gasterosteus aculeatus	54.50	0.00e+00	934.00
IUUC-Ggo-045143	Gorilla gorilla	83.58	0.00e+00	2112.00
IUUC-Hsa-045913	Homo sapiens	84.62	0.00e+00	2103.00
IUUC-Lch-049619	Latimeria chalumnae	42.55	0.00e+00	855.00
IUUC-Loc-052289	Lepisosteus oculatus	74.86	0.00e+00	1055.00
IUUC-Laf-053607	Loxodonta africana	85.38	0.00e+00	2227.00
IUUC-Mcc-055342	Macaca mulatta	84.61	0.00e+00	2053.00
IUUC-Meu-056275	Macropus eugenii	48.58	2.00e-104	374.00
IUUC-Mtr-058185	Medicago truncatula	42.22	4.00e-03	36.60
IUUC-Mga-059241	Meleagris gallopavo	39.50	1.00e-140	495.00
IUUC-Mmr-061348	Microcebus murinus	37.13	1.00e-111	399.00
IUUC-Mdo-062155	Monodelphis domestica	85.89	0.00e+00	2300.00
IUUC-Mmu-064259	Mus musculus	43.90	0.00e+00	749.00
IUUC-Mpu-066534	Mustela putorius furo	33.52	2.00e-87	317.00
IUUC-Mlu-067834	Myotis lucifugus	40.10	0.00e+00	803.00
IUUC-Nle-069168	Nomascus leucogenys	40.22	0.00e+00	751.00
IUUC-Opr-070976	Ochotona princeps	37.02	2.00e-80	294.00
IUUC-Ocu-074534	Oryctolagus cuniculus	66.31	0.00e+00	715.00
IUUC-Oga-088116	Otolemur garnettii	40.47	0.00e+00	777.00
IUUC-Oar-090041	Ovis aries	36.94	4.00e-104	373.00
IUUC-Ptr-091135	Pan troglodytes	82.33	0.00e+00	2031.00
IUUC-Pan-092665	Papio anubis	82.45	0.00e+00	2019.00
IUUC-Pma-094508	Petromyzon marinus	49.06	3.00e-55	209.00
IUUC-Pfo-097115	Poecilia formosa	55.11	0.00e+00	668.00
IUUC-Pab-097935	Pongo abelii	40.48	0.00e+00	780.00
IUUC-Pca-100481	Procavia capensis	72.41	0.00e+00	1157.00
IUUC-Pva-102376	Pteropus vampyrus	38.34	1.00e-77	285.00
IUUC-Rno-105508	Rattus norvegicus	37.01	3.00e-112	400.00
IUUC-Sar-113036	Sorex araneus	61.68	4.00e-42	167.00
IUUC-Sbi-114163	Sorghum bicolor	29.23	5.90e-01	29.30
IUUC-Ssc-115574	Sus scrofa	66.52	0.00e+00	1391.00
IUUC-Tgu-117233	Taeniopygia guttata	91.07	0.00e+00	2286.00
IUUC-Tru-117725	Takifugu rubripes	56.66	0.00e+00	1011.00
IUUC-Tsy-118786	Tarsius syrichta	36.22	3.00e-72	267.00
IUUC-Tbe-127989	Tupaia belangeri	78.36	0.00e+00	698.00
IUUC-Ttr-128518	Tursiops truncatus	85.00	0.00e+00	2224.00
IUUC-Vpa-130230	Vicugna pacos	43.78	1.00e-76	282.00
IUUC-Xtr-132265	Xenopus tropicalis	72.90	0.00e+00	1821.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence