iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	5.80e-16	58.6	31	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           +++ vkt+  ++  ++v ed++v ++Ke+++++++++ eq+ L+  G+ LkD++tLs+ gi dg+++h+v+k +
   Q: 31   IRVIVKTPGNQN-VFTVAEDTSVRQFKEQLSSHFKCQMEQLVLVSMGRLLKDHDTLSQRGITDGHTIHVVIKSK 103
           6899***88888.89*******************************************************9975 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MPHIISRSPR MPQSRHPAGV PADGNIPPGV IRVIVKTPGN QNVFTVAEDT SVRQFKEQLS 60
SHFKCQMEQL VLVSMGRLLK DHDTLSQRGI TDGHTIHVVI KSKHGSRSLT HSFRNLLTNN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTACTTAG TCCACTCTGT GCCAAGTATG AGTCAGTAGC CACGCCAGGC CTCAGCTGGG 60
CCACATCTGG AGAATTGGGG TGAGGGTTCA ACATCGAATA ATTCTGGCTT TTGCCCATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

rno:293287

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001843	Ailuropoda melanoleuca	57.49	2.00e-116	412.00
IUUC-Bta-013133	Bos taurus	60.33	8.00e-180	623.00
IUUC-Cfa-021207	Canis familiaris	60.29	1.00e-171	596.00
IUUC-Cpo-021799	Cavia porcellus	60.12	4.00e-99	354.00
IUUC-Dno-029619	Dasypus novemcinctus	59.32	5.00e-174	604.00
IUUC-Ete-032987	Echinops telfairi	49.26	2.00e-100	359.00
IUUC-Eca-034256	Equus caballus	57.59	2.00e-118	419.00
IUUC-Fca-035660	Felis catus	59.00	5.00e-175	607.00
IUUC-Ggo-045615	Gorilla gorilla	57.95	4.00e-123	434.00
IUUC-Hsa-046806	Homo sapiens	57.11	7.00e-120	424.00
IUUC-Itr-047957	Ictidomys tridecemlineatus	60.55	4.00e-174	604.00
IUUC-Mcc-055287	Macaca mulatta	55.60	2.00e-114	405.00
IUUC-Mmu-064356	Mus musculus	81.57	0.00e+00	900.00
IUUC-Mpu-066627	Mustela putorius furo	61.49	0.00e+00	644.00
IUUC-Nle-069185	Nomascus leucogenys	55.65	9.00e-122	430.00
IUUC-Opr-070843	Ochotona princeps	53.99	1.00e-101	362.00
IUUC-Ocu-074622	Oryctolagus cuniculus	60.68	0.00e+00	649.00
IUUC-Oga-088463	Otolemur garnettii	58.12	3.00e-173	602.00
IUUC-Oar-090390	Ovis aries	59.97	2.00e-171	595.00
IUUC-Pan-091893	Papio anubis	62.01	9.00e-76	276.00
IUUC-Sja-107846	Schizosaccharomyces japonicus	33.87	3.40e-02	30.40
IUUC-Ssc-116230	Sus scrofa	55.92	1.00e-163	569.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence