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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Mmu-063922
UUCD1 version UUC-MuM-00772
Ensembl Protein ID ENSMUSP00000025264.6
UniProt Accession Q8K4P0; Q8C7C6; Q8CD02; WDR33_MOUSE
Genbank Protein ID BAC00776.1; BAC27549.1; BAC34364.1; ENSMUSP00000025264
Protein Name pre-mRNA 3' end processing protein WDR33; WD repeat-containing protein 33; WD repeat-containing protein WDC146
Genbank Nucleotide ID AB086191; AK031786; AK050653; AC124393
Gene Name Wdr33; Wdc146
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000024400.15 ENSMUST00000082319.13 ENSMUSP00000080936.7
ENSMUSG00000024400.15 ENSMUST00000025264.6 ENSMUSP00000025264.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitecircBasemicroRNATRANSFAC
RAID2
Protein-protein Interaction
IIDPINAHINTMentha
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
UniProtPHOSIDAmUbiSiDa
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-29 102.0 201 231
UBD/Beta-Prp 1.80e-64 218.9 197 403
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H++ ++  +f  +d+ ++++sdDgt+++WD+
   Q: 201  HKEAIREASFspTDNKFATCSDDGTVRIWDF 231
           999999999**555****************6 PP
   

   UBD/Beta-Prp
   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlk 91
           ++++hk+ i+   fsp ++ +at s+dgt+++wd+ +    r l gh a v++v+++p++ + v+gs+D  + ik wd++tg+ + tl+
   Q: 197  MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDsqQPIKFWDPKTGQSLATLH 285
           6789999******************************9*9*****************************9999**************** PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltggh 179
           +h+++v+ ++++ +g++l+++s+d   +++d+++ ++  ++++gh++  + v++hp    l++sG+ D+ + +W +  +k +  ++ +h
   Q: 286  AHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHeGLFASGGSDGSLLFWHVGVEKEVGGMEMAH 374
           ************************************9999************************************************* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwd 208
           ++++ sl++++ g  l sgs+d t k+w 
   Q: 375  EGMIWSLAWHPLGHILCSGSNDHTSKFWT 403
           ****************************6 PP
   
Organism Mus musculus
Functional Description
(View)

Functional Description


     Essential for both cleavage and polyadenylation of pre-mRNA 3' ends.
 Essential for both cleavage and polyadenylation of pre-mRNA 3' ends.
Protein Sequence
(Fasta)
MATEIGSPPR FFHMPRFQHQ APRQLFYKRP DFAQQQAMQQ LTFDGKRMRK AVNRKTIDYN 60
PSVIKYLENR IWQRDQRDMR AIQPDAGYYN DLVPPIGMLN NPMNAVTTKF VRTSTNKVKC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-063922|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCGGGGCGTA GCGCCGTGAG GCCGTGATGA CGCACAGGCG TACGCTCGGT GGCTCCTCGG 60
GTAAGATGGC GGCTGCATCT TTGAAGGAGA GGAATTGAAG AGTGAGGAGA AGGGAAGGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-063922|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0176--Collagen
KW-0181--Complete proteome
KW-1017--Isopeptide bond
KW-0488--Methylation
KW-0507--mRNA processing
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0832--Ubl conjugation
KW-0853--WD repeat
Interpro

IPR016133--Insect_antifreeze_prot
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005581--C:collagen trimer
GO:0001650--C:fibrillar center
GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0006379--P:mRNA cleavage
GO:0006397--P:mRNA processing
KEGG mmu:74320
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001064 Aegilops tauschii 49.64 4.00e-121 428.00
IUUC-Aml-001363 Ailuropoda melanoleuca 99.34 0.00e+00 1167.00
IUUC-Atr-003030 Amborella trichopoda 56.27 5.00e-135 474.00
IUUC-Apl-003409 Anas platyrhynchos 96.65 0.00e+00 1137.00
IUUC-Aca-004694 Anolis carolinensis 98.07 0.00e+00 1104.00
IUUC-Aly-006063 Arabidopsis lyrata 54.63 1.00e-134 473.00
IUUC-Ath-006583 Arabidopsis thaliana 50.69 1.00e-128 453.00
IUUC-Ago-007805 Ashbya gossypii 41.42 5.00e-80 291.00
IUUC-Acl-008075 Aspergillus clavatus 41.00 8.00e-92 331.00
IUUC-Afl-008582 Aspergillus flavus 41.82 6.00e-90 325.00
IUUC-Afu-008817 Aspergillus fumigatus 41.01 2.00e-79 290.00
IUUC-Ani-009391 Aspergillus nidulans 39.90 5.00e-84 305.00
IUUC-Ang-009750 Aspergillus niger 42.90 2.00e-75 275.00
IUUC-Aor-010085 Aspergillus oryzae 40.50 2.00e-91 330.00
IUUC-Ate-010397 Aspergillus terreus 40.75 6.00e-91 328.00
IUUC-Ame-010741 Astyanax mexicanus 85.76 5.00e-172 598.00
IUUC-Bgr-012169 Blumeria graminis 48.90 6.00e-98 351.00
IUUC-Bta-013265 Bos taurus 98.86 0.00e+00 1167.00
IUUC-Bci-013762 Botrytis cinerea 45.71 3.00e-102 365.00
IUUC-Bdi-014849 Brachypodium distachyon 56.53 2.00e-132 466.00
IUUC-Bol-015325 Brassica oleracea 54.39 6.00e-139 488.00
IUUC-Bra-017187 Brassica rapa 54.28 9.00e-139 487.00
IUUC-Cel-018378 Caenorhabditis elegans 50.72 5.00e-144 505.00
IUUC-Cja-019547 Callithrix jacchus 99.18 0.00e+00 1173.00
IUUC-Cfa-020031 Canis familiaris 99.34 0.00e+00 1163.00
IUUC-Cpo-021554 Cavia porcellus 93.64 0.00e+00 1060.00
IUUC-Cre-022830 Chlamydomonas reinhardtii 42.20 2.00e-70 260.00
IUUC-Csa-023146 Chlorocebus sabaeus 98.85 0.00e+00 1158.00
IUUC-Cho-024679 Choloepus hoffmanni 89.05 0.00e+00 1019.00
IUUC-Cin-025415 Ciona intestinalis 59.41 3.00e-170 592.00
IUUC-Csv-026003 Ciona savignyi 60.26 6.00e-174 603.00
IUUC-Cgl-026391 Colletotrichum gloeosporioides 46.85 3.00e-99 355.00
IUUC-Cne-026983 Cryptococcus neoformans 42.89 4.00e-96 345.00
IUUC-Cme-027147 Cyanidioschyzon merolae 50.88 2.00e-117 416.00
IUUC-Dre-028545 Danio rerio 90.47 0.00e+00 1087.00
IUUC-Dno-029677 Dasypus novemcinctus 99.01 0.00e+00 1161.00
IUUC-Dse-031371 Dothistroma septosporum 42.20 6.00e-87 315.00
IUUC-Dme-031663 Drosophila melanogaster 67.44 0.00e+00 685.00
IUUC-Ete-032511 Echinops telfairi 91.18 0.00e+00 1093.00
IUUC-Eca-034152 Equus caballus 99.34 0.00e+00 1165.00
IUUC-Eeu-034560 Erinaceus europaeus 86.31 5.00e-121 429.00
IUUC-Fca-035820 Felis catus 99.18 0.00e+00 1162.00
IUUC-Fox-037958 Fusarium oxysporum 45.90 4.00e-97 348.00
IUUC-Fso-038162 Fusarium solani 45.63 1.00e-95 344.00
IUUC-Gmo-039708 Gadus morhua 89.05 0.00e+00 1051.00
IUUC-Ggr-040031 Gaeumannomyces graminis 39.80 1.00e-83 304.00
IUUC-Gga-040963 Gallus gallus 96.81 0.00e+00 1137.00
IUUC-Gac-041541 Gasterosteus aculeatus 87.35 0.00e+00 1050.00
IUUC-Gma-044352 Glycine max 56.12 2.00e-133 469.00
IUUC-Ggo-045564 Gorilla gorilla 98.85 0.00e+00 1155.00
IUUC-Hsa-045833 Homo sapiens 99.18 0.00e+00 1162.00
IUUC-Hvu-047848 Hordeum vulgare 52.48 2.00e-92 332.00
IUUC-Itr-048083 Ictidomys tridecemlineatus 99.34 0.00e+00 1161.00
IUUC-Kpa-049308 Komagataella pastoris 40.31 2.00e-82 299.00
IUUC-Lch-050525 Latimeria chalumnae 94.14 0.00e+00 1044.00
IUUC-Lpe-051364 Leersia perrieri 51.06 2.00e-116 413.00
IUUC-Loc-052696 Lepisosteus oculatus 89.16 0.00e+00 1075.00
IUUC-Lma-052951 Leptosphaeria maculans 47.70 4.00e-103 369.00
IUUC-Laf-053653 Loxodonta africana 99.34 0.00e+00 1160.00
IUUC-Mcc-055797 Macaca mulatta 99.18 0.00e+00 1161.00
IUUC-Meu-056331 Macropus eugenii 93.65 0.00e+00 712.00
IUUC-Mor-057168 Magnaporthe oryzae 41.22 7.00e-92 331.00
IUUC-Mpo-057510 Magnaporthe poae 43.02 2.00e-62 232.00
IUUC-Mtr-058032 Medicago truncatula 55.87 2.00e-132 466.00
IUUC-Mla-058852 Melampsora laricipopulina 47.45 2.00e-112 399.00
IUUC-Mga-059311 Meleagris gallopavo 96.48 0.00e+00 1134.00
IUUC-Mvi-060544 Microbotryum violaceum 51.05 4.00e-114 405.00
IUUC-Mmr-061143 Microcebus murinus 99.34 0.00e+00 1162.00
IUUC-Mdo-061977 Monodelphis domestica 99.30 0.00e+00 1144.00
IUUC-Mac-064961 Musa acuminata 57.40 5.00e-138 484.00
IUUC-Mpu-066079 Mustela putorius furo 99.22 0.00e+00 961.00
IUUC-Mlu-067247 Myotis lucifugus 99.01 0.00e+00 1177.00
IUUC-Nfi-068255 Neosartorya fischeri 41.94 3.00e-86 312.00
IUUC-Ncr-068909 Neurospora crassa 44.05 9.00e-99 354.00
IUUC-Nle-068994 Nomascus leucogenys 99.18 0.00e+00 1161.00
IUUC-Opr-071079 Ochotona princeps 97.22 0.00e+00 1167.00
IUUC-Ont-071971 Oreochromis niloticus 90.02 0.00e+00 1089.00
IUUC-Oan-073135 Ornithorhynchus anatinus 99.19 0.00e+00 979.00
IUUC-Ocu-073982 Oryctolagus cuniculus 99.00 0.00e+00 1162.00
IUUC-Oba-075297 Oryza barthii 51.73 4.00e-119 422.00
IUUC-Obr-076641 Oryza brachyantha 55.95 1.00e-130 460.00
IUUC-Ogl-077539 Oryza glaberrima 58.78 9.00e-95 340.00
IUUC-Ogu-078807 Oryza glumaepatula 51.73 3.00e-119 422.00
IUUC-Oin-079229 Oryza indica 56.00 2.00e-132 466.00
IUUC-Olo-080371 Oryza longistaminata 51.62 4.00e-117 415.00
IUUC-Ome-081149 Oryza meridionalis 51.73 6.00e-119 421.00
IUUC-Oni-082970 Oryza nivara 51.73 4.00e-119 422.00
IUUC-Opu-083415 Oryza punctata 51.20 7.00e-117 414.00
IUUC-Oru-085236 Oryza rufipogon 51.73 1.00e-119 423.00
IUUC-Ola-087421 Oryzias latipes 91.20 0.00e+00 1083.00
IUUC-Olu-087821 Ostreococcus lucimarinus 49.45 8.00e-104 370.00
IUUC-Oga-088132 Otolemur garnettii 99.34 0.00e+00 1162.00
IUUC-Oar-089513 Ovis aries 98.86 0.00e+00 1167.00
IUUC-Ptr-090717 Pan troglodytes 99.18 0.00e+00 1161.00
IUUC-Pan-092108 Papio anubis 99.18 0.00e+00 1160.00
IUUC-Psi-093892 Pelodiscus sinensis 99.12 0.00e+00 1123.00
IUUC-Pma-094561 Petromyzon marinus 80.70 0.00e+00 940.00
IUUC-Pno-094943 Phaeosphaeria nodorum 45.04 1.00e-103 370.00
IUUC-Ppa-095359 Physcomitrella patens 61.23 5.00e-144 504.00
IUUC-Pfo-096516 Poecilia formosa 90.88 0.00e+00 1047.00
IUUC-Pab-097759 Pongo abelii 99.18 0.00e+00 1161.00
IUUC-Pop-098892 Populus trichocarpa 56.91 3.00e-137 482.00
IUUC-Pca-100405 Procavia capensis 86.38 7.00e-107 382.00
IUUC-Ppe-101957 Prunus persica 55.21 9.00e-135 474.00
IUUC-Pva-102918 Pteropus vampyrus 99.34 0.00e+00 1164.00
IUUC-Pgr-103594 Puccinia graminis 50.81 8.00e-116 411.00
IUUC-Ptt-103879 Puccinia triticina 54.52 5.00e-101 362.00
IUUC-Pte-104419 Pyrenophora teres 45.69 4.00e-104 372.00
IUUC-Pyt-104718 Pyrenophora triticirepentis 47.80 2.00e-102 367.00
IUUC-Rno-105838 Rattus norvegicus 99.26 0.00e+00 1214.00
IUUC-Sce-106331 Saccharomyces cerevisiae 39.14 8.00e-77 281.00
IUUC-Sha-107435 Sarcophilus harrisii 99.13 0.00e+00 1141.00
IUUC-Sja-107796 Schizosaccharomyces japonicus 44.78 3.00e-100 358.00
IUUC-Spo-108163 Schizosaccharomyces pombe 44.53 2.00e-103 369.00
IUUC-Smo-109602 Selaginella moellendorffii 57.33 9.00e-135 473.00
IUUC-Sit-109729 Setaria italica 57.33 3.00e-134 472.00
IUUC-Sly-111679 Solanum lycopersicum 57.82 6.00e-138 484.00
IUUC-Sar-113157 Sorex araneus 98.35 0.00e+00 1170.00
IUUC-Sbi-114853 Sorghum bicolor 53.68 3.00e-133 469.00
IUUC-Sre-115085 Sporisorium reilianum 41.45 3.00e-101 362.00
IUUC-Ssc-116286 Sus scrofa 98.85 0.00e+00 1160.00
IUUC-Tgu-117219 Taeniopygia guttata 96.81 0.00e+00 1140.00
IUUC-Tru-117550 Takifugu rubripes 90.24 0.00e+00 1057.00
IUUC-Tsy-119294 Tarsius syrichta 99.34 0.00e+00 1165.00
IUUC-Tni-120561 Tetraodon nigroviridis 88.99 0.00e+00 1069.00
IUUC-Tca-121347 Theobroma cacao 56.12 4.00e-135 475.00
IUUC-Tre-122018 Trichoderma reesei 43.91 1.00e-97 350.00
IUUC-Tvi-122413 Trichoderma virens 43.91 2.00e-96 346.00
IUUC-Tae-123904 Triticum aestivum 51.92 3.00e-131 462.00
IUUC-Tme-127077 Tuber melanosporum 50.54 3.00e-105 375.00
IUUC-Tbe-127744 Tupaia belangeri 74.12 4.00e-160 559.00
IUUC-Ttr-128777 Tursiops truncatus 90.28 0.00e+00 1022.00
IUUC-Uma-129568 Ustilago maydis 39.72 1.00e-97 350.00
IUUC-Vda-129834 Verticillium dahliae 43.97 3.00e-95 342.00
IUUC-Vpa-130563 Vicugna pacos 84.04 2.00e-75 277.00
IUUC-Vvi-131360 Vitis vinifera 57.03 1.00e-136 480.00
IUUC-Xtr-132630 Xenopus tropicalis 88.72 0.00e+00 1066.00
IUUC-Xma-133665 Xiphophorus maculatus 91.40 0.00e+00 1060.00
IUUC-Yli-134556 Yarrowia lipolytica 37.27 4.00e-85 308.00
IUUC-Zma-135787 Zea mays 55.38 6.00e-135 474.00
Created Date 25-Jun-2017

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