iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131664

UUCD1 version

UUC-ViV-01034

Ensembl Protein ID

VIT_12s0028g03630.t01

UniProt Accession

F6H5D3; F6H5D3_VITVI

Genbank Protein ID

CCB47283.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595235

Gene Name

VIT_12s0028g03630

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0028g03630	VIT_12s0028g03630.t01	VIT_12s0028g03630.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.20e-27	95.2	266	411

Active Site

Position(s)	Description	Evidence
347	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk..ifhPnvyenGkvClsilk 87
           +++e k le+d pe+i++++ +   ++ ++++i+Gp++tpY++g+F +++ fp++YP+ PP v + +   +++Pn+y+ GkvCls+l+
   Q: 266  IQEEWKILERDLPETIFVRVYEA-RMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGglRLNPNLYDCGKVCLSLLN 352
           799********************.5******************************************999*****************7 PP
   S: 88   .....eeekWsp.alsvesvllsiqsll..aepnpesplneeaa..ellkknreeykkk 136
                ++e W p ++++ +vl+siq l+  a+p +++p +e+++  e  +++ ++y++ 
   Q: 353  twngkKTEMWIPgKSTMLQVLVSIQGLIlnAKPFFNEPGYENMYvgEDGERRSKQYNED 411
           777779******999************98888*******99998656666666778776 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGDDYASQSS QSSISKKHKQ NEVVLSDGIH IERDEGPTGL SITEEKVVTG GNKGKSKIDC 60
DETWQNQAQV ALANDVRNPT SEAGSEDSPD PLKSFASGSS DLININGFNS DLSYHDDDAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCCCTCTTT CTATTTCACG CTTCCCAGAA ATCCGTTGGA AGCTTCAGAG AAGAATTGGG 60
TAATGTTCAA GACCGTGATC AGTCCTACTA GTTTCTACAC CTGAAATTTT CAAGAGGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

KEGG

vvi:100264294

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001098	Aegilops tauschii	52.96	1.00e-96	346.00
IUUC-Atr-002598	Amborella trichopoda	55.12	5.00e-94	336.00
IUUC-Aly-005551	Arabidopsis lyrata	63.18	1.00e-101	363.00
IUUC-Ath-007217	Arabidopsis thaliana	63.18	3.00e-104	371.00
IUUC-Afl-008480	Aspergillus flavus	39.13	8.00e-47	181.00
IUUC-Ani-009341	Aspergillus nidulans	35.40	7.00e-31	128.00
IUUC-Bci-013596	Botrytis cinerea	32.19	4.00e-17	81.60
IUUC-Bdi-014931	Brachypodium distachyon	54.22	4.00e-112	397.00
IUUC-Bol-016435	Brassica oleracea	57.52	3.00e-103	367.00
IUUC-Bra-017967	Brassica rapa	63.30	2.00e-101	362.00
IUUC-Cel-018661	Caenorhabditis elegans	37.83	2.00e-37	150.00
IUUC-Cre-022768	Chlamydomonas reinhardtii	48.57	3.00e-36	143.00
IUUC-Cho-024890	Choloepus hoffmanni	38.68	9.00e-29	124.00
IUUC-Cgl-026412	Colletotrichum gloeosporioides	30.00	1.00e-16	80.10
IUUC-Dno-028913	Dasypus novemcinctus	39.25	2.00e-33	139.00
IUUC-Ete-032587	Echinops telfairi	38.50	4.00e-31	131.00
IUUC-Fox-037961	Fusarium oxysporum	31.88	2.00e-16	79.70
IUUC-Fso-038352	Fusarium solani	35.61	6.00e-15	74.30
IUUC-Gac-042251	Gasterosteus aculeatus	39.15	3.00e-34	140.00
IUUC-Gma-044121	Glycine max	59.07	7.00e-125	439.00
IUUC-Hvu-047441	Hordeum vulgare	52.46	2.00e-109	387.00
IUUC-Laf-054034	Loxodonta africana	39.72	3.00e-34	142.00
IUUC-Mla-059114	Melampsora laricipopulina	34.01	8.00e-23	101.00
IUUC-Mac-064722	Musa acuminata	47.19	2.00e-115	408.00
IUUC-Oba-075602	Oryza barthii	45.34	2.00e-105	375.00
IUUC-Obr-076463	Oryza brachyantha	62.37	4.00e-108	383.00
IUUC-Ogl-077040	Oryza glaberrima	45.34	2.00e-105	375.00
IUUC-Ogu-078917	Oryza glumaepatula	45.34	2.00e-105	375.00
IUUC-Oin-079561	Oryza indica	45.34	2.00e-105	375.00
IUUC-Ome-081384	Oryza meridionalis	43.42	2.00e-103	368.00
IUUC-Oni-082241	Oryza nivara	45.34	2.00e-105	375.00
IUUC-Opu-083659	Oryza punctata	45.66	2.00e-112	398.00
IUUC-Oru-084622	Oryza rufipogon	45.14	6.00e-105	373.00
IUUC-Osa-085920	Oryza sativa	45.14	6.00e-105	373.00
IUUC-Oar-090367	Ovis aries	39.72	4.00e-34	141.00
IUUC-Pop-099199	Populus trichocarpa	54.32	4.00e-136	477.00
IUUC-Ppe-101602	Prunus persica	63.32	2.00e-140	491.00
IUUC-Sly-111847	Solanum lycopersicum	55.56	1.00e-132	465.00
IUUC-Stu-112756	Solanum tuberosum	60.95	5.00e-133	466.00
IUUC-Tru-118115	Takifugu rubripes	39.25	4.00e-34	141.00
IUUC-Tsy-118899	Tarsius syrichta	48.72	1.00e-30	130.00
IUUC-Tca-121399	Theobroma cacao	57.51	1.00e-146	511.00
IUUC-Tre-121946	Trichoderma reesei	36.36	6.00e-16	77.80
IUUC-Tvi-122513	Trichoderma virens	35.62	1.00e-18	87.00
IUUC-Tae-125407	Triticum aestivum	53.57	2.00e-110	392.00
IUUC-Tur-126255	Triticum urartu	50.89	2.00e-96	345.00
IUUC-Tme-126930	Tuber melanosporum	37.50	7.00e-41	162.00
IUUC-Vda-129728	Verticillium dahliae	43.27	2.00e-14	72.80
IUUC-Vpa-130310	Vicugna pacos	42.64	4.00e-34	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence