iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113856

UUCD1 version

UUC-SoB-00046

Ensembl Protein ID

Sb07g000650.1

UniProt Accession

A0A1B6PES1; A0A1B6PES1_SORBI

Genbank Protein ID

KXG24181.1; KXG24182.1; KXG24183.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766; CM000766; CM000766

Gene Name

SORBI_007G005300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g000650	Sb07g000650.1	Sb07g000650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-08	33.5	237	279

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCled+   ++ ++vlpC H fha C+  w     ++s +  CP+C+
   Q: 237  CAICLEDYsvgEK-LRVLPCRHKFHAACVDLW-----LTSWRTFCPVCK 279
           ********99555.******************.....5555666****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MACPRGRTSL PLCFFLMICL MAQLGASNVV LMANNTTLSF DDVEATFTPA VKGSGVNGVL 60
YAVEPMDACS PLRTKAIEGS ASPFALVIRG GCQFDDKVRN AQNAGFKAAV VYDNEDNGIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCATGGCA GCCGACGTCT CCATCCCCAC TCGATCCGCC TCCACCACCC GCTAATTCCT 60
CCTCGTTCTA GTCCCCTGCC TCTCTCCTGC GCCGACTCGT CTTCTTCCTC GCGTCACTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004022	Anas platyrhynchos	33.92	7.00e-34	137.00
IUUC-Acl-008221	Aspergillus clavatus	37.00	6.00e-12	65.50
IUUC-Afl-008601	Aspergillus flavus	47.92	6.00e-12	64.70
IUUC-Afu-009008	Aspergillus fumigatus	47.92	5.00e-12	65.10
IUUC-Ani-009169	Aspergillus nidulans	47.92	4.00e-12	65.10
IUUC-Aor-010062	Aspergillus oryzae	47.92	7.00e-12	63.50
IUUC-Ate-010341	Aspergillus terreus	50.00	2.00e-12	66.60
IUUC-Ame-010635	Astyanax mexicanus	34.18	7.00e-35	140.00
IUUC-Bdi-014989	Brachypodium distachyon	73.90	0.00e+00	669.00
IUUC-Cel-018181	Caenorhabditis elegans	29.64	4.00e-19	88.60
IUUC-Cfa-020540	Canis familiaris	33.33	1.00e-29	122.00
IUUC-Cin-025554	Ciona intestinalis	36.15	4.00e-33	134.00
IUUC-Dno-030036	Dasypus novemcinctus	32.16	1.00e-33	136.00
IUUC-Ete-032577	Echinops telfairi	33.84	1.00e-31	129.00
IUUC-Fal-037621	Ficedula albicollis	32.25	4.00e-33	134.00
IUUC-Gmo-039485	Gadus morhua	33.87	1.00e-34	139.00
IUUC-Gga-041166	Gallus gallus	33.57	1.00e-33	136.00
IUUC-Gac-042124	Gasterosteus aculeatus	32.81	3.00e-33	134.00
IUUC-Hvu-047136	Hordeum vulgare	73.48	6.00e-163	566.00
IUUC-Kpa-049143	Komagataella pastoris	40.54	3.00e-11	62.40
IUUC-Lch-050034	Latimeria chalumnae	32.63	2.00e-33	135.00
IUUC-Mtr-058129	Medicago truncatula	71.21	4.00e-106	377.00
IUUC-Mla-058935	Melampsora laricipopulina	44.12	3.00e-10	59.70
IUUC-Mga-059780	Meleagris gallopavo	33.57	1.00e-33	135.00
IUUC-Mac-065216	Musa acuminata	62.90	1.00e-127	449.00
IUUC-Mpu-066094	Mustela putorius furo	31.89	2.00e-31	129.00
IUUC-Ont-071868	Oreochromis niloticus	34.39	1.00e-31	129.00
IUUC-Oin-080138	Oryza indica	73.08	1.00e-163	568.00
IUUC-Oni-082422	Oryza nivara	71.86	1.00e-167	581.00
IUUC-Oru-085122	Oryza rufipogon	71.40	3.00e-157	547.00
IUUC-Osa-085977	Oryza sativa	71.58	4.00e-167	580.00
IUUC-Ola-086440	Oryzias latipes	30.15	1.00e-28	119.00
IUUC-Pno-094874	Phaeosphaeria nodorum	53.85	3.00e-13	69.30
IUUC-Pfo-097232	Poecilia formosa	33.22	1.00e-30	126.00
IUUC-Pab-097909	Pongo abelii	32.52	2.00e-34	139.00
IUUC-Ppe-101970	Prunus persica	75.21	2.00e-103	368.00
IUUC-Smo-109274	Selaginella moellendorffii	53.85	5.00e-70	256.00
IUUC-Sit-110628	Setaria italica	87.60	0.00e+00	788.00
IUUC-Sly-110946	Solanum lycopersicum	64.77	1.00e-96	345.00
IUUC-Stu-112408	Solanum tuberosum	65.37	2.00e-106	378.00
IUUC-Sar-113226	Sorex araneus	44.59	4.00e-14	71.60
IUUC-Tgu-116908	Taeniopygia guttata	31.92	5.00e-33	134.00
IUUC-Tru-118219	Takifugu rubripes	32.53	4.00e-31	127.00
IUUC-Tsy-119333	Tarsius syrichta	32.17	8.00e-33	133.00
IUUC-Tre-121978	Trichoderma reesei	52.08	3.00e-13	69.30
IUUC-Tae-125403	Triticum aestivum	72.73	2.00e-177	614.00
IUUC-Vpa-130314	Vicugna pacos	32.75	3.00e-29	122.00
IUUC-Xtr-132114	Xenopus tropicalis	32.86	3.00e-33	135.00
IUUC-Xma-133474	Xiphophorus maculatus	33.77	2.00e-31	129.00
IUUC-Yli-134649	Yarrowia lipolytica	29.04	4.00e-19	88.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence