iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-130842

Ensembl Protein ID

VIT_01s0011g03410.t01

UniProt Accession

D7T959; D7T959_VITVI

Genbank Protein ID

CBI27030.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595752

Gene Name

VIT_01s0011g03410

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0011g03410	VIT_01s0011g03410.t01	VIT_01s0011g03410.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.00e-24	85.5	169	210
ULD/UDP/UBQ/UBQ_PIM	1.00e-25	90.1	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e++++q+ +MG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 169  FEEAIQQILDMGggtWDRDTVVRALRAAYNNPERAVEYLYSG 210
           699************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk++vktlkg++fe++v+++dtv+++K++i++++g   +p++qq LI++Gk+LkD ttL e+++ ++s+v+++++k+k
   Q: 1    MKIFVKTLKGTHFEIQVKPEDTVADVKANIEAVQGsdvYPASQQMLIHQGKVLKDGTTLDENKVAENSFVVVMLSKNK 78
           99*************************************************************************987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MKIFVKTLKG THFEIQVKPE DTVADVKANI EAVQGSDVYP ASQQMLIHQG KVLKDGTTLD 60
ENKVAENSFV VVMLSKNKNS SEGSTASTAP APAPAPAPTP IVKAPSASAP PPTTTSTLTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGGACGGAG ATCGTGGAAA GATGAAGATT TTCGTCAAGA CTTTGAAAGG AACTCACTTC 60
GAAATCCAAG TGAAACCTGA AGATACAGTC TGTTTTTCTC ATCGCCCTTC TTTATTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

vvi:100245820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	65.84	4.00e-86	311.00
IUUC-Aml-001195	Ailuropoda melanoleuca	37.80	2.00e-29	122.00
IUUC-Atr-003116	Amborella trichopoda	83.20	3.00e-107	380.00
IUUC-Apl-003371	Anas platyrhynchos	37.89	4.00e-33	134.00
IUUC-Aly-005498	Arabidopsis lyrata	86.35	3.00e-110	390.00
IUUC-Ath-006676	Arabidopsis thaliana	84.25	1.00e-106	379.00
IUUC-Ani-009460	Aspergillus nidulans	39.68	3.00e-28	118.00
IUUC-Bta-012922	Bos taurus	38.52	2.00e-32	132.00
IUUC-Cel-018364	Caenorhabditis elegans	28.82	1.00e-13	69.30
IUUC-Cfa-020683	Canis familiaris	37.80	6.00e-29	120.00
IUUC-Cpo-022145	Cavia porcellus	38.59	2.00e-33	135.00
IUUC-Cho-024814	Choloepus hoffmanni	44.27	8.00e-19	87.00
IUUC-Cin-025741	Ciona intestinalis	27.00	2.00e-21	95.50
IUUC-Cne-027056	Cryptococcus neoformans	40.00	5.00e-12	64.70
IUUC-Dno-029543	Dasypus novemcinctus	37.86	8.00e-32	130.00
IUUC-Dor-030358	Dipodomys ordii	40.08	2.00e-33	135.00
IUUC-Ete-032583	Echinops telfairi	38.05	2.00e-20	92.40
IUUC-Eca-034243	Equus caballus	38.52	3.00e-32	131.00
IUUC-Eeu-034721	Erinaceus europaeus	34.35	2.00e-20	92.40
IUUC-Fca-035679	Felis catus	38.11	2.00e-31	129.00
IUUC-Fal-037148	Ficedula albicollis	37.50	3.00e-33	135.00
IUUC-Gma-043937	Glycine max	81.82	4.00e-117	413.00
IUUC-Hvu-047832	Hordeum vulgare	67.21	3.00e-89	321.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	37.45	3.00e-28	118.00
IUUC-Kpa-049314	Komagataella pastoris	35.90	7.00e-29	120.00
IUUC-Lch-050553	Latimeria chalumnae	38.67	3.00e-28	118.00
IUUC-Lpe-051087	Leersia perrieri	70.92	5.00e-96	343.00
IUUC-Loc-051748	Lepisosteus oculatus	38.72	1.00e-32	132.00
IUUC-Lma-053328	Leptosphaeria maculans	43.42	3.00e-10	55.50
IUUC-Laf-054293	Loxodonta africana	38.27	6.00e-31	127.00
IUUC-Mpu-066389	Mustela putorius furo	37.40	4.00e-29	121.00
IUUC-Mlu-067999	Myotis lucifugus	36.99	4.00e-31	127.00
IUUC-Nfi-068390	Neosartorya fischeri	38.06	1.00e-26	113.00
IUUC-Oba-075392	Oryza barthii	65.32	3.00e-90	324.00
IUUC-Obr-076631	Oryza brachyantha	71.10	2.00e-85	308.00
IUUC-Ogu-078883	Oryza glumaepatula	65.32	2.00e-90	325.00
IUUC-Oin-079817	Oryza indica	64.92	5.00e-90	323.00
IUUC-Olo-080929	Oryza longistaminata	64.92	5.00e-90	323.00
IUUC-Ome-081866	Oryza meridionalis	65.32	1.00e-90	325.00
IUUC-Oni-083092	Oryza nivara	64.92	5.00e-90	323.00
IUUC-Opu-083756	Oryza punctata	68.92	2.00e-93	335.00
IUUC-Oru-084816	Oryza rufipogon	64.92	5.00e-90	323.00
IUUC-Osa-086112	Oryza sativa	64.92	5.00e-90	323.00
IUUC-Oga-088023	Otolemur garnettii	36.18	7.00e-31	127.00
IUUC-Oar-089964	Ovis aries	38.11	9.00e-32	130.00
IUUC-Psi-093477	Pelodiscus sinensis	38.25	9.00e-27	113.00
IUUC-Pno-095064	Phaeosphaeria nodorum	35.02	1.00e-15	76.60
IUUC-Pva-102137	Pteropus vampyrus	38.15	3.00e-33	135.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	46.97	2.00e-21	95.90
IUUC-Sce-106214	Saccharomyces cerevisiae	33.83	2.00e-13	69.30
IUUC-Sha-107073	Sarcophilus harrisii	37.19	2.00e-29	122.00
IUUC-Sit-110235	Setaria italica	70.68	2.00e-87	315.00
IUUC-Sly-111609	Solanum lycopersicum	80.32	6.00e-105	373.00
IUUC-Sar-112925	Sorex araneus	37.61	3.00e-27	115.00
IUUC-Ssc-116329	Sus scrofa	38.11	2.00e-32	132.00
IUUC-Tgu-116918	Taeniopygia guttata	37.50	3.00e-33	135.00
IUUC-Tru-117920	Takifugu rubripes	40.41	5.00e-45	174.00
IUUC-Tsy-118836	Tarsius syrichta	42.86	6.00e-18	84.30
IUUC-Tvi-122617	Trichoderma virens	41.56	7.00e-27	114.00
IUUC-Tae-125207	Triticum aestivum	66.26	1.00e-87	315.00
IUUC-Tur-126610	Triticum urartu	67.08	1.00e-86	312.00
IUUC-Tbe-127493	Tupaia belangeri	44.27	1.00e-18	86.70
IUUC-Ttr-128464	Tursiops truncatus	38.52	4.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence