iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000007217.4	ENSXETT00000015707.4	ENSXETP00000015707.4
ENSXETG00000007217.4	ENSXETT00000064015.1	ENSXETP00000062276.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-45	149.1	107	138
UBD/Beta-Prp	2.50e-92	309.4	29	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           Ht++v  + f ++ tll++G+ D tik+WD+ 
   Q: 107  HTAPVATMTFdPTsTLLATGGCDSTIKIWDVI 138
           999********777****************85 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvv 145
           v++++dg +++ +   + +++ d+ tg  ++t++   +++++s ++sp+++ lv+Gs+   ++ wd+++g+c+++ +++h++ v ++++
   Q: 29   VQINSDG-TYILCTCGNKLNILDIATGAVTYTIEqDDQEDITSFALSPDDEILVTGSRALLLKQWDWKQGTCSRTWKAIHTAPVATMTF 116
           7889998.78888888999999***********9455679************************************************* PP
   S: 146  hpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfsp 232
           +p++ ll++G+ D+t+++Wd+  + + + l+g   + v+ ++f++++   +l s s+d +++lwdl+t++c+  ++ h + v+s+ fsp
   Q: 117  DPTSTLLATGGCDSTIKIWDVIKQYCTHNLKG-SSGVVHLVQFHPDMsrLQLFSSSMDYKIRLWDLKTSKCLCVMETHFSAVTSLCFSP 204
           ******************************99.*************9777899************************************ PP
   S: 233  nderlvsgssDgsiriWdlrsgdllktlq 261
           +++ ++s + D+   +Wdl+++ + +t+ 
   Q: 205  DGNTMISSGRDKICTVWDLETKSPKRTVP 233
           *********************99988875 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MNMAAPSIKF KTNYAVTRKI EAFYKGGKVQ INSDGTYILC TCGNKLNILD IATGAVTYTI 60
EQDDQEDITS FALSPDDEIL VTGSRALLLK QWDWKQGTCS RTWKAIHTAP VATMTFDPTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACATGG CGGCTCCCTC AATAAAGTTC AAGACCAAGT AAGCAAAGTG CTTAAATGCT 60
CATGTCGGCA TAGCACAGCG CCATAAACCC GAGGGGGGCA GCCGGTGTAG GAGCTGTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0030098--P:lymphocyte differentiation
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0010564--P:regulation of cell cycle process
GO:0048538--P:thymus development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	31.74	2.00e-112	400.00
IUUC-Aml-002376	Ailuropoda melanoleuca	55.69	0.00e+00	865.00
IUUC-Atr-002486	Amborella trichopoda	34.83	8.00e-136	478.00
IUUC-Apl-003519	Anas platyrhynchos	57.96	0.00e+00	816.00
IUUC-Aca-004363	Anolis carolinensis	62.44	2.00e-171	595.00
IUUC-Aly-006152	Arabidopsis lyrata	33.29	3.00e-125	442.00
IUUC-Ath-006966	Arabidopsis thaliana	33.77	7.00e-127	447.00
IUUC-Ago-007746	Ashbya gossypii	24.97	2.00e-74	273.00
IUUC-Acl-008009	Aspergillus clavatus	26.16	8.00e-81	295.00
IUUC-Afl-008681	Aspergillus flavus	26.09	4.00e-73	270.00
IUUC-Afu-008798	Aspergillus fumigatus	26.01	3.00e-72	266.00
IUUC-Ani-009278	Aspergillus nidulans	25.67	9.00e-76	278.00
IUUC-Ang-009640	Aspergillus niger	26.96	9.00e-82	298.00
IUUC-Aor-010160	Aspergillus oryzae	25.88	4.00e-73	269.00
IUUC-Ate-010320	Aspergillus terreus	26.85	2.00e-84	306.00
IUUC-Ame-010930	Astyanax mexicanus	74.13	3.00e-91	327.00
IUUC-Bgr-012054	Blumeria graminis	25.21	4.00e-68	253.00
IUUC-Bta-012611	Bos taurus	56.29	0.00e+00	859.00
IUUC-Bci-013797	Botrytis cinerea	27.02	4.00e-83	302.00
IUUC-Bdi-014384	Brachypodium distachyon	34.50	2.00e-134	473.00
IUUC-Bol-015097	Brassica oleracea	34.37	9.00e-127	447.00
IUUC-Bra-017798	Brassica rapa	34.13	1.00e-127	450.00
IUUC-Cel-018664	Caenorhabditis elegans	30.92	4.00e-104	372.00
IUUC-Cja-019092	Callithrix jacchus	54.89	0.00e+00	867.00
IUUC-Cfa-021040	Canis familiaris	55.73	0.00e+00	867.00
IUUC-Cpo-022529	Cavia porcellus	56.30	0.00e+00	860.00
IUUC-Csa-024205	Chlorocebus sabaeus	54.71	0.00e+00	865.00
IUUC-Cin-025560	Ciona intestinalis	40.94	1.00e-173	603.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	27.26	1.00e-83	304.00
IUUC-Cne-027082	Cryptococcus neoformans	23.61	1.00e-59	224.00
IUUC-Dre-028138	Danio rerio	50.80	0.00e+00	802.00
IUUC-Dno-029914	Dasypus novemcinctus	46.78	3.00e-157	548.00
IUUC-Dor-030685	Dipodomys ordii	49.80	9.00e-115	407.00
IUUC-Dse-031429	Dothistroma septosporum	24.54	4.00e-72	266.00
IUUC-Dme-031995	Drosophila melanogaster	28.64	1.00e-87	317.00
IUUC-Ete-033086	Echinops telfairi	52.79	3.00e-122	432.00
IUUC-Eca-034354	Equus caballus	56.39	0.00e+00	854.00
IUUC-Eeu-034832	Erinaceus europaeus	53.68	2.00e-129	456.00
IUUC-Fca-036136	Felis catus	53.35	0.00e+00	810.00
IUUC-Fal-036859	Ficedula albicollis	59.51	0.00e+00	956.00
IUUC-Fox-037863	Fusarium oxysporum	25.00	8.00e-69	255.00
IUUC-Fso-038389	Fusarium solani	26.81	6.00e-84	305.00
IUUC-Gmo-038711	Gadus morhua	65.66	0.00e+00	682.00
IUUC-Ggr-039820	Gaeumannomyces graminis	26.02	7.00e-77	282.00
IUUC-Gga-040263	Gallus gallus	62.00	0.00e+00	995.00
IUUC-Gac-041291	Gasterosteus aculeatus	59.85	0.00e+00	989.00
IUUC-Gma-044026	Glycine max	34.41	1.00e-137	484.00
IUUC-Ggo-044693	Gorilla gorilla	55.46	0.00e+00	853.00
IUUC-Hsa-046048	Homo sapiens	55.58	0.00e+00	855.00
IUUC-Hvu-047608	Hordeum vulgare	34.53	4.00e-134	472.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	56.67	0.00e+00	893.00
IUUC-Kpa-049209	Komagataella pastoris	28.21	5.00e-80	292.00
IUUC-Lch-050085	Latimeria chalumnae	60.52	0.00e+00	940.00
IUUC-Lpe-050945	Leersia perrieri	33.22	1.00e-126	447.00
IUUC-Loc-052679	Lepisosteus oculatus	61.14	0.00e+00	1024.00
IUUC-Laf-053685	Loxodonta africana	55.43	0.00e+00	824.00
IUUC-Mcc-055861	Macaca mulatta	54.96	0.00e+00	848.00
IUUC-Meu-056820	Macropus eugenii	59.63	4.00e-145	508.00
IUUC-Mor-057234	Magnaporthe oryzae	26.32	1.00e-76	281.00
IUUC-Mpo-057456	Magnaporthe poae	25.18	6.00e-59	222.00
IUUC-Mtr-058122	Medicago truncatula	34.42	3.00e-139	489.00
IUUC-Mla-058980	Melampsora laricipopulina	27.75	7.00e-58	218.00
IUUC-Mga-060080	Meleagris gallopavo	62.19	0.00e+00	997.00
IUUC-Mvi-060338	Microbotryum violaceum	31.41	3.00e-110	392.00
IUUC-Mmr-060762	Microcebus murinus	55.56	0.00e+00	853.00
IUUC-Mdo-061975	Monodelphis domestica	56.86	0.00e+00	853.00
IUUC-Mmu-064038	Mus musculus	56.91	0.00e+00	879.00
IUUC-Mac-065189	Musa acuminata	32.00	6.00e-128	451.00
IUUC-Mpu-066526	Mustela putorius furo	55.71	0.00e+00	847.00
IUUC-Mlu-067716	Myotis lucifugus	55.93	0.00e+00	909.00
IUUC-Nfi-068474	Neosartorya fischeri	26.45	8.00e-75	275.00
IUUC-Ncr-068826	Neurospora crassa	26.04	3.00e-70	259.00
IUUC-Nle-069832	Nomascus leucogenys	55.58	0.00e+00	875.00
IUUC-Opr-071183	Ochotona princeps	50.93	0.00e+00	780.00
IUUC-Ont-072371	Oreochromis niloticus	61.01	0.00e+00	990.00
IUUC-Oan-073491	Ornithorhynchus anatinus	56.81	0.00e+00	791.00
IUUC-Oba-075963	Oryza barthii	33.49	4.00e-128	452.00
IUUC-Obr-076173	Oryza brachyantha	33.66	3.00e-130	459.00
IUUC-Ogl-077692	Oryza glaberrima	33.49	7.00e-128	451.00
IUUC-Ogu-078965	Oryza glumaepatula	33.49	5.00e-128	451.00
IUUC-Oin-079708	Oryza indica	33.37	2.00e-127	450.00
IUUC-Olo-080679	Oryza longistaminata	33.61	6.00e-127	448.00
IUUC-Oni-082960	Oryza nivara	33.37	2.00e-127	449.00
IUUC-Opu-083282	Oryza punctata	33.65	5.00e-124	438.00
IUUC-Oru-085224	Oryza rufipogon	33.49	3.00e-128	452.00
IUUC-Osa-085320	Oryza sativa	33.49	3.00e-128	452.00
IUUC-Ola-086370	Oryzias latipes	66.15	2.00e-159	556.00
IUUC-Olu-087814	Ostreococcus lucimarinus	29.67	3.00e-76	280.00
IUUC-Oga-088458	Otolemur garnettii	54.80	0.00e+00	884.00
IUUC-Oar-090032	Ovis aries	52.28	9.00e-172	596.00
IUUC-Ptr-090749	Pan troglodytes	55.21	0.00e+00	850.00
IUUC-Pan-091691	Papio anubis	52.98	0.00e+00	801.00
IUUC-Psi-093200	Pelodiscus sinensis	63.93	0.00e+00	1015.00
IUUC-Pma-094165	Petromyzon marinus	47.38	6.00e-168	584.00
IUUC-Pno-095048	Phaeosphaeria nodorum	26.80	5.00e-57	216.00
IUUC-Ppa-095336	Physcomitrella patens	36.01	1.00e-135	477.00
IUUC-Pfo-096132	Poecilia formosa	60.52	0.00e+00	951.00
IUUC-Pab-097855	Pongo abelii	55.18	0.00e+00	865.00
IUUC-Pop-099434	Populus trichocarpa	31.84	6.00e-122	431.00
IUUC-Pca-100232	Procavia capensis	55.00	5.00e-110	392.00
IUUC-Ppe-101665	Prunus persica	32.69	8.00e-129	454.00
IUUC-Pva-102178	Pteropus vampyrus	56.45	0.00e+00	871.00
IUUC-Pgr-103288	Puccinia graminis	26.72	7.00e-60	225.00
IUUC-Ptt-103808	Puccinia triticina	27.51	1.00e-59	224.00
IUUC-Pte-104205	Pyrenophora teres	26.80	8.00e-77	281.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	25.86	2.00e-66	247.00
IUUC-Rno-105617	Rattus norvegicus	56.75	0.00e+00	880.00
IUUC-Sce-106281	Saccharomyces cerevisiae	28.03	5.00e-77	282.00
IUUC-Sha-107378	Sarcophilus harrisii	56.33	0.00e+00	838.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	30.89	2.00e-98	353.00
IUUC-Spo-108361	Schizosaccharomyces pombe	30.21	2.00e-100	360.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	26.84	4.00e-85	309.00
IUUC-Smo-109257	Selaginella moellendorffii	33.61	2.00e-126	446.00
IUUC-Sit-110258	Setaria italica	33.25	1.00e-133	470.00
IUUC-Sly-111521	Solanum lycopersicum	32.87	1.00e-128	454.00
IUUC-Sar-113586	Sorex araneus	66.67	3.00e-40	159.00
IUUC-Sbi-114768	Sorghum bicolor	33.77	2.00e-135	476.00
IUUC-Sre-115159	Sporisorium reilianum	31.14	8.00e-52	199.00
IUUC-Ssc-116342	Sus scrofa	45.39	1.00e-169	589.00
IUUC-Tgu-117320	Taeniopygia guttata	59.25	0.00e+00	919.00
IUUC-Tru-118024	Takifugu rubripes	59.26	0.00e+00	934.00
IUUC-Tni-119971	Tetraodon nigroviridis	56.37	0.00e+00	935.00
IUUC-Tca-121248	Theobroma cacao	34.30	5.00e-131	461.00
IUUC-Tre-122079	Trichoderma reesei	27.24	8.00e-77	281.00
IUUC-Tvi-122554	Trichoderma virens	26.48	2.00e-74	274.00
IUUC-Tae-123690	Triticum aestivum	34.72	3.00e-135	475.00
IUUC-Tur-126436	Triticum urartu	32.58	7.00e-98	351.00
IUUC-Tme-126942	Tuber melanosporum	26.71	9.00e-75	275.00
IUUC-Tbe-128000	Tupaia belangeri	62.11	1.00e-62	234.00
IUUC-Ttr-128964	Tursiops truncatus	54.52	0.00e+00	844.00
IUUC-Uma-129473	Ustilago maydis	25.68	2.00e-67	251.00
IUUC-Vda-129749	Verticillium dahliae	27.91	6.00e-71	262.00
IUUC-Vvi-131511	Vitis vinifera	34.08	1.00e-128	453.00
IUUC-Xma-133672	Xiphophorus maculatus	60.39	0.00e+00	979.00
IUUC-Yli-134602	Yarrowia lipolytica	30.15	1.00e-104	374.00
IUUC-Zma-135559	Zea mays	32.95	2.00e-126	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence