iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095256

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545043

Gene Name

PHYPADRAFT_190910

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S154_52V6	PP1S154_52V6.1	PP1S154_52V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-29	100.4	488	521
E3 activity/RING/RING	1.30e-06	29.5	63	100
E3 activity/RING/U-box	2.70e-10	40.9	59	121
UBD/Beta-Prp	4.30e-43	148.3	395	698

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H+ + ++++f  ++  +lvsGsdDg++kvW +r+
   Q: 488  HEKRAWSVDFsrTEpSMLVSGSDDGKVKVWCTRQ 521
           888899*****866799*************9876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC++ ++d  +v++CgH f+ +C+          +++ +CP C
   Q: 63   CPICFQTMED-AFVTNCGHSFCYTCITTH------LNNRSNCPSC 100
           **********.***************777......899999**** PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqa 67
           ++flCpI ++ M+d  v+ +G+++  ++I  +l++  + cP + + lt+e l+Pn  l +l ++
   Q: 59   KDFLCPICFQTMEDAFVTNCGHSFCYTCITTHLNNRSN-CPSCARYLTSEHLIPNFLLSKLLKK 121
           78*********************************999.****************999877666 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae.........vtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkg 92
           h ++ ++++ f +d++++at++ ++++kv++++t  ++ +l +   +          +++++++ +k +++++   +t+ vwd++t++ v+ +++
   Q: 395  HSSNIVSSIEFDRDDEFFATAGVSRRVKVFNFET--VVNELADVHCPlveiatrskLSCLSWNKCAKpLIASSDYEGTVTVWDVNTRQAVMEYEE 487
           56778999**************************..666665544445666666669*******998455555555******************* PP
   S: 93   hedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl.ktgkllrtltgghtdsvy 184
           he++++s++fs++  + lvsGs+d  ++vw +++++         ++ ++cv+++p + n ++ Gs+D ++  +dl +  + l+ ++g h ++v 
   Q: 488  HEKRAWSVDFSRTEpSMLVSGSDDGKVKVWCTRQESSAL--SLDMRANICCVKYNPGSsNHIAVGSADHCIHYFDLrNASTPLYVFKG-HRKAVS 579
           ************888***************877777776..33444569*******999*****************445678****99.****** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..dlrsgdllktlqlhn........ssvis 269
            ++f s  +el+s+s+d+t++lwd+q+   +rtl+ght+  + v ++ n+e++++gs+ + ++++   +     ++ +  hn        s++is
   Q: 580  YVKFIS-PTELASASTDSTLRLWDVQRDCSIRTLRGHTNEKNFVGLTVNNEYIACGSESNEVFVYhkAMSRPASWHRFGSHNsedngddsSHFIS 673
           ***888.59*******************99**********************************966666677899999999*******999999 PP
   S: 270  vavlsfgdnvlvlgsedskvniwkl 294
             +++ + + ++++ + +++++++l
   Q: 674  AVCWKSQSPTMLAANSQGTIKVLAL 698
           999*******************987 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MHRGRVVCNK NEAMASSIGV SVPSARGFIK EEAQTGLWVS DVITSESVDV ARASAGVDKD 60
FLCPICFQTM EDAFVTNCGH SFCYTCITTH LNNRSNCPSC ARYLTSEHLI PNFLLSKLLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATCGCG GCAGAGTAGT TTGCAACAAA AACGAGGCCA TGGCATCGTC GATTGGGGTC 60
AGTGTTCCTT CCGCACGGGG TTTTATTAAG GAAGAGGCTC AGACGGGGCT TTGGGTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_190910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001265	Ailuropoda melanoleuca	39.45	1.00e-130	459.00
IUUC-Apl-003796	Anas platyrhynchos	38.01	2.00e-123	435.00
IUUC-Aca-005078	Anolis carolinensis	38.85	4.00e-128	451.00
IUUC-Bta-012595	Bos taurus	39.52	3.00e-131	461.00
IUUC-Cja-018926	Callithrix jacchus	39.52	3.00e-131	461.00
IUUC-Cfa-021088	Canis familiaris	39.43	7.00e-132	463.00
IUUC-Cpo-022442	Cavia porcellus	39.22	2.00e-124	439.00
IUUC-Csa-024119	Chlorocebus sabaeus	39.43	2.00e-130	459.00
IUUC-Dno-029887	Dasypus novemcinctus	39.52	9.00e-132	463.00
IUUC-Eca-034403	Equus caballus	38.58	4.00e-123	434.00
IUUC-Fca-036475	Felis catus	38.74	5.00e-123	434.00
IUUC-Fal-037189	Ficedula albicollis	38.83	1.00e-130	459.00
IUUC-Gga-040806	Gallus gallus	38.81	1.00e-131	462.00
IUUC-Ggo-044430	Gorilla gorilla	35.48	1.00e-82	300.00
IUUC-Hsa-045853	Homo sapiens	39.52	1.00e-131	462.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	52.86	2.00e-72	264.00
IUUC-Loc-052728	Lepisosteus oculatus	39.45	1.00e-123	436.00
IUUC-Laf-053775	Loxodonta africana	39.67	4.00e-132	464.00
IUUC-Meu-056595	Macropus eugenii	40.14	5.00e-59	221.00
IUUC-Mga-059646	Meleagris gallopavo	37.98	1.00e-123	436.00
IUUC-Mmr-060990	Microcebus murinus	39.45	3.00e-130	458.00
IUUC-Mdo-062287	Monodelphis domestica	39.37	6.00e-131	460.00
IUUC-Mmu-064097	Mus musculus	39.52	1.00e-131	462.00
IUUC-Mpu-066612	Mustela putorius furo	38.74	2.00e-123	435.00
IUUC-Mlu-067967	Myotis lucifugus	38.62	1.00e-121	429.00
IUUC-Nle-069543	Nomascus leucogenys	39.52	4.00e-131	461.00
IUUC-Oan-073409	Ornithorhynchus anatinus	38.52	3.00e-121	428.00
IUUC-Ocu-073756	Oryctolagus cuniculus	39.34	8.00e-126	443.00
IUUC-Oga-088215	Otolemur garnettii	38.97	2.00e-125	442.00
IUUC-Oar-089880	Ovis aries	38.97	2.00e-125	442.00
IUUC-Ptr-090597	Pan troglodytes	39.52	1.00e-131	462.00
IUUC-Pan-091987	Papio anubis	39.52	3.00e-131	461.00
IUUC-Psi-094033	Pelodiscus sinensis	38.26	3.00e-125	441.00
IUUC-Pab-098029	Pongo abelii	39.52	8.00e-132	463.00
IUUC-Pva-102407	Pteropus vampyrus	39.22	3.00e-128	451.00
IUUC-Rno-105312	Rattus norvegicus	39.67	2.00e-132	465.00
IUUC-Ssc-115987	Sus scrofa	28.85	4.00e-28	118.00
IUUC-Tgu-116471	Taeniopygia guttata	38.74	1.00e-130	459.00
IUUC-Tsy-119415	Tarsius syrichta	38.74	1.00e-122	432.00
IUUC-Ttr-129100	Tursiops truncatus	39.02	3.00e-121	427.00
IUUC-Vpa-130613	Vicugna pacos	35.20	1.00e-105	376.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence