iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107988

Ensembl Protein ID

EEB08078

UniProt Accession

B6K3M1; B6K3M1_SCHJY

Genbank Protein ID

EEB08078.2

Protein Name

Elongin C

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_03211

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_03211	EEB08078	EEB08078

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/Elon-B_C	45.36	5.00e-19	89.00	IUUC-Cel-018375
E3 adaptor/Cullin RING/ECS/Elon-B_C	51.06	1.00e-19	92.00	IUUC-Hsa-046045

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MSTEFVKLVS CDGFEYILKK EIACVSGTIK TMLEDAKFAE AQNNECHFPE IRSDLLEKVC 60
DYMHYNFTYK NQTDVPDFDI PPEMVLELLV ASAYLDV 97

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACAAATTTA AAACAAGAGG TTAACTGAAT CTTACGCGGA ACTACTCGAC TCTGCAAGTC 60
TTTGAAGCTC AAACATTTCT TTCATTATCG ATTACGGGTT ACACTCTAAC AGGAGTACTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016073--Skp1_comp_POZ

Pfam

PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0070449--C:elongin complex
GO:0000113--C:nucleotide-excision repair factor 4 complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0070911--P:global genome nucleotide-excision repair
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000253	Aegilops tauschii	41.94	3.00e-20	88.20
IUUC-Aml-001991	Ailuropoda melanoleuca	51.61	3.00e-22	94.70
IUUC-Atr-002833	Amborella trichopoda	41.76	1.00e-17	79.30
IUUC-Apl-003237	Anas platyrhynchos	51.06	2.00e-21	92.40
IUUC-Aca-004654	Anolis carolinensis	51.06	2.00e-21	92.00
IUUC-Aly-006231	Arabidopsis lyrata	39.78	7.00e-18	79.70
IUUC-Ath-006923	Arabidopsis thaliana	39.78	7.00e-18	79.70
IUUC-Ago-007903	Ashbya gossypii	41.84	5.00e-14	67.00
IUUC-Acl-008323	Aspergillus clavatus	55.79	6.00e-26	106.00
IUUC-Afl-008628	Aspergillus flavus	56.25	1.00e-26	108.00
IUUC-Afu-009082	Aspergillus fumigatus	56.38	6.00e-26	106.00
IUUC-Aor-010001	Aspergillus oryzae	56.25	1.00e-26	108.00
IUUC-Ate-010513	Aspergillus terreus	56.25	3.00e-26	107.00
IUUC-Ame-011398	Astyanax mexicanus	51.06	3.00e-21	91.70
IUUC-Bgr-012303	Blumeria graminis	46.32	1.00e-21	92.80
IUUC-Bta-012534	Bos taurus	51.06	2.00e-21	92.00
IUUC-Bci-013677	Botrytis cinerea	48.42	4.00e-24	100.00
IUUC-Bdi-014321	Brachypodium distachyon	41.94	7.00e-20	87.00
IUUC-Bol-016090	Brassica oleracea	40.86	2.00e-18	81.30
IUUC-Bra-017868	Brassica rapa	40.86	5.00e-18	80.50
IUUC-Cel-018375	Caenorhabditis elegans	45.36	2.00e-20	89.00
IUUC-Cja-019366	Callithrix jacchus	51.06	2.00e-21	92.00
IUUC-Cfa-020174	Canis familiaris	51.06	2.00e-21	92.00
IUUC-Cpo-021699	Cavia porcellus	51.06	2.00e-21	92.00
IUUC-Cre-022777	Chlamydomonas reinhardtii	45.00	7.00e-22	93.20
IUUC-Csa-023190	Chlorocebus sabaeus	51.06	2.00e-21	92.00
IUUC-Cho-024745	Choloepus hoffmanni	51.06	2.00e-21	92.00
IUUC-Cin-025306	Ciona intestinalis	48.94	4.00e-20	87.80
IUUC-Csv-025946	Ciona savignyi	48.94	2.00e-20	88.60
IUUC-Cgl-026396	Colletotrichum gloeosporioides	46.88	4.00e-22	94.40
IUUC-Cne-027000	Cryptococcus neoformans	37.00	2.00e-12	62.40
IUUC-Cme-027340	Cyanidioschyzon merolae	32.67	7.00e-09	50.10
IUUC-Dre-028790	Danio rerio	51.06	2.00e-21	92.40
IUUC-Dno-029818	Dasypus novemcinctus	50.00	1.00e-20	89.40
IUUC-Dor-030819	Dipodomys ordii	51.06	2.00e-21	92.00
IUUC-Dse-031361	Dothistroma septosporum	44.79	1.00e-21	92.00
IUUC-Dme-031930	Drosophila melanogaster	50.00	5.00e-22	94.00
IUUC-Ete-032591	Echinops telfairi	49.18	6.00e-12	59.70
IUUC-Eca-034061	Equus caballus	51.06	2.00e-21	92.00
IUUC-Eeu-034521	Erinaceus europaeus	48.94	3.00e-20	88.20
IUUC-Fca-036134	Felis catus	51.06	2.00e-21	92.00
IUUC-Fal-036748	Ficedula albicollis	50.53	2.00e-21	92.00
IUUC-Fox-037851	Fusarium oxysporum	44.79	2.00e-20	89.40
IUUC-Fso-038264	Fusarium solani	46.81	3.00e-21	91.70
IUUC-Gmo-038954	Gadus morhua	51.06	2.00e-21	92.40
IUUC-Ggr-040012	Gaeumannomyces graminis	43.75	1.00e-20	89.40
IUUC-Gga-040980	Gallus gallus	51.06	2.00e-21	92.00
IUUC-Gac-041521	Gasterosteus aculeatus	51.06	2.00e-21	92.40
IUUC-Gma-043602	Glycine max	43.96	6.00e-18	81.30
IUUC-Ggo-045234	Gorilla gorilla	47.87	8.00e-13	63.50
IUUC-Hsa-046045	Homo sapiens	51.06	2.00e-21	92.00
IUUC-Itr-048702	Ictidomys tridecemlineatus	51.06	2.00e-21	92.00
IUUC-Lch-049778	Latimeria chalumnae	51.06	1.00e-21	92.40
IUUC-Lpe-051659	Leersia perrieri	40.86	6.00e-20	87.00
IUUC-Loc-052233	Lepisosteus oculatus	50.56	1.00e-19	85.50
IUUC-Lma-053309	Leptosphaeria maculans	44.33	9.00e-20	86.30
IUUC-Laf-053786	Loxodonta africana	51.06	2.00e-21	92.00
IUUC-Mcc-055335	Macaca mulatta	51.06	2.00e-21	92.00
IUUC-Meu-056860	Macropus eugenii	48.94	2.00e-14	68.60
IUUC-Mor-057180	Magnaporthe oryzae	36.84	3.00e-19	84.70
IUUC-Mpo-057363	Magnaporthe poae	38.54	4.00e-18	80.90
IUUC-Mtr-058082	Medicago truncatula	45.05	4.00e-19	84.00
IUUC-Mga-059423	Meleagris gallopavo	51.06	2.00e-21	92.00
IUUC-Mvi-060554	Microbotryum violaceum	33.68	6.00e-11	58.20
IUUC-Mmr-061580	Microcebus murinus	51.06	2.00e-21	92.00
IUUC-Mdo-062202	Monodelphis domestica	41.74	5.00e-19	84.30
IUUC-Mmu-063628	Mus musculus	51.06	2.00e-21	92.40
IUUC-Mac-064490	Musa acuminata	40.54	1.00e-12	62.00
IUUC-Mpu-066346	Mustela putorius furo	51.06	2.00e-21	92.00
IUUC-Mlu-067018	Myotis lucifugus	51.06	2.00e-21	92.00
IUUC-Nfi-068602	Neosartorya fischeri	55.21	3.00e-26	107.00
IUUC-Ncr-068827	Neurospora crassa	40.43	7.00e-18	80.10
IUUC-Nle-069159	Nomascus leucogenys	51.06	2.00e-21	92.00
IUUC-Opr-071223	Ochotona princeps	49.18	6.00e-12	59.70
IUUC-Ont-071271	Oreochromis niloticus	51.06	2.00e-21	92.40
IUUC-Oan-073669	Ornithorhynchus anatinus	62.07	2.00e-06	40.80
IUUC-Ocu-074728	Oryctolagus cuniculus	51.06	2.00e-21	91.70
IUUC-Oba-075100	Oryza barthii	41.49	1.00e-20	89.40
IUUC-Ogu-078673	Oryza glumaepatula	41.49	2.00e-20	89.70
IUUC-Oin-080039	Oryza indica	40.00	2.00e-13	65.50
IUUC-Olo-080570	Oryza longistaminata	32.94	1.00e-11	60.10
IUUC-Ome-081403	Oryza meridionalis	41.49	1.00e-20	89.40
IUUC-Oni-082578	Oryza nivara	41.49	1.00e-20	89.40
IUUC-Opu-083635	Oryza punctata	40.86	2.00e-19	86.70
IUUC-Oru-085035	Oryza rufipogon	41.49	1.00e-20	89.40
IUUC-Osa-085821	Oryza sativa	41.49	1.00e-20	89.40
IUUC-Ola-086971	Oryzias latipes	51.06	1.00e-21	92.40
IUUC-Olu-087763	Ostreococcus lucimarinus	29.17	2.00e-08	48.50
IUUC-Oga-088648	Otolemur garnettii	51.06	2.00e-21	92.40
IUUC-Oar-089700	Ovis aries	51.06	4.00e-21	92.80
IUUC-Ptr-091070	Pan troglodytes	35.16	5.00e-06	41.20
IUUC-Pan-091801	Papio anubis	51.06	2.00e-21	92.00
IUUC-Psi-093227	Pelodiscus sinensis	51.06	2.00e-21	92.00
IUUC-Pma-094234	Petromyzon marinus	51.06	4.00e-21	91.30
IUUC-Ppa-095747	Physcomitrella patens	38.30	1.00e-16	77.80
IUUC-Pfo-096185	Poecilia formosa	51.06	1.00e-21	92.40
IUUC-Pab-098417	Pongo abelii	51.06	2.00e-21	92.00
IUUC-Pop-099607	Populus trichocarpa	45.05	4.00e-20	87.00
IUUC-Ppe-101921	Prunus persica	45.16	4.00e-20	87.40
IUUC-Pva-102930	Pteropus vampyrus	51.06	2.00e-21	92.00
IUUC-Ptt-103936	Puccinia triticina	31.48	6.00e-06	41.20
IUUC-Pte-104395	Pyrenophora teres	46.88	2.00e-21	91.70
IUUC-Pyt-104631	Pyrenophora triticirepentis	48.45	2.00e-22	95.10
IUUC-Rno-105140	Rattus norvegicus	51.06	2.00e-21	92.00
IUUC-Sce-106143	Saccharomyces cerevisiae	38.61	5.00e-09	50.40
IUUC-Sha-106705	Sarcophilus harrisii	51.06	2.00e-21	92.00
IUUC-Spo-108165	Schizosaccharomyces pombe	64.58	1.00e-36	141.00
IUUC-Ssl-108453	Sclerotinia sclerotiorum	47.42	4.00e-24	100.00
IUUC-Smo-109012	Selaginella moellendorffii	43.96	3.00e-18	80.90
IUUC-Sit-110266	Setaria italica	40.86	1.00e-13	66.60
IUUC-Sly-111805	Solanum lycopersicum	44.62	3.00e-13	64.30
IUUC-Stu-112888	Solanum tuberosum	42.86	2.00e-18	81.30
IUUC-Sar-113152	Sorex araneus	32.69	7.30e-01	27.30
IUUC-Sbi-114820	Sorghum bicolor	40.86	5.00e-20	87.40
IUUC-Sre-115154	Sporisorium reilianum	42.57	3.00e-17	78.20
IUUC-Ssc-115310	Sus scrofa	51.06	2.00e-21	92.00
IUUC-Tgu-117102	Taeniopygia guttata	51.06	2.00e-21	92.40
IUUC-Tru-117654	Takifugu rubripes	51.06	2.00e-21	92.40
IUUC-Tsy-119381	Tarsius syrichta	51.06	2.00e-21	92.40
IUUC-Tca-121163	Theobroma cacao	42.86	5.00e-18	80.10
IUUC-Tre-121943	Trichoderma reesei	48.94	1.00e-21	92.40
IUUC-Tvi-122667	Trichoderma virens	46.88	3.00e-21	91.70
IUUC-Tae-122895	Triticum aestivum	41.94	3.00e-20	88.20
IUUC-Tur-126150	Triticum urartu	41.94	3.00e-20	88.60
IUUC-Tme-127140	Tuber melanosporum	45.05	1.00e-17	79.30
IUUC-Tbe-127857	Tupaia belangeri	51.06	2.00e-21	92.40
IUUC-Ttr-128270	Tursiops truncatus	51.06	2.00e-21	92.00
IUUC-Uma-129350	Ustilago maydis	44.12	2.00e-18	82.00
IUUC-Vda-129668	Verticillium dahliae	45.83	5.00e-21	90.90
IUUC-Vpa-130824	Vicugna pacos	51.06	2.00e-21	92.00
IUUC-Vvi-131018	Vitis vinifera	42.86	9.00e-19	82.80
IUUC-Xtr-132564	Xenopus tropicalis	51.06	2.00e-21	92.00
IUUC-Xma-133957	Xiphophorus maculatus	51.06	1.00e-21	92.40
IUUC-Yli-134430	Yarrowia lipolytica	48.42	2.00e-22	95.50
IUUC-Zma-134683	Zea mays	39.78	9.00e-20	86.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence