iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121353

Ensembl Protein ID

EOY24106

UniProt Accession

A0A061G3G4; A0A061G3G4_THECC

Genbank Protein ID

EOY24106.1

Protein Name

Regulator of nonsense transcripts 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_015799

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_015799	EOY24106	EOY24106

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	57.51	0.00e+00	964.00	IUUC-Sce-106206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDSQFETASQ PDPATDAYTF LEFNTQGESD FEYTDFRDTI RSWPTPSDTT AADRSGSDHQ 60
SDTAASSSPS SASKGAGRGA TSNNNSNSNS ISNSGAVVDA LATGISGLNF EETVGDEDGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAACGATTCG GCAGAGAAAT TTTCCTTCCA TGGATTCTCA ATTCGAAACG GCCTCGCAAC 60
CCGACCCGGC TACCGACGCT TACACCTTCC TCGAATTTAA CACCCAAGGC GAGTCCGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR027417--P-loop_NTPase
IPR018999--RNA-helicase_UPF1_UPF2-interct

PROSITE

PS51192--HELICASE_ATP_BIND_1

Pfam

PF04851--ResIII
PF09416--UPF1_Zn_bind

Gene Ontology

GO:0005829--C:cytosol
GO:0000932--C:P-body
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0003729--F:mRNA binding
GO:0008270--F:zinc ion binding
GO:0042742--P:defense response to bacterium
GO:0009867--P:jasmonic acid mediated signaling pathway
GO:0048571--P:long-day photoperiodism
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0009611--P:response to wounding
GO:0009863--P:salicylic acid mediated signaling pathway
GO:0010182--P:sugar mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000680	Aegilops tauschii	84.28	0.00e+00	1829.00
IUUC-Aml-002008	Ailuropoda melanoleuca	72.59	0.00e+00	1281.00
IUUC-Atr-002632	Amborella trichopoda	83.85	0.00e+00	2086.00
IUUC-Apl-003997	Anas platyrhynchos	72.59	0.00e+00	1279.00
IUUC-Aca-004322	Anolis carolinensis	32.61	9.00e-54	204.00
IUUC-Aly-006521	Arabidopsis lyrata	82.92	0.00e+00	2023.00
IUUC-Ath-007059	Arabidopsis thaliana	81.72	0.00e+00	2016.00
IUUC-Ago-007801	Ashbya gossypii	57.30	0.00e+00	942.00
IUUC-Acl-008312	Aspergillus clavatus	66.51	0.00e+00	1145.00
IUUC-Afl-008429	Aspergillus flavus	67.03	0.00e+00	1146.00
IUUC-Afu-009092	Aspergillus fumigatus	67.40	0.00e+00	1147.00
IUUC-Ani-009317	Aspergillus nidulans	66.83	0.00e+00	1148.00
IUUC-Ang-009783	Aspergillus niger	66.31	0.00e+00	1146.00
IUUC-Aor-010178	Aspergillus oryzae	67.03	0.00e+00	1146.00
IUUC-Ate-010294	Aspergillus terreus	67.16	0.00e+00	1148.00
IUUC-Ame-010774	Astyanax mexicanus	69.44	4.00e-124	438.00
IUUC-Bgr-012293	Blumeria graminis	65.97	0.00e+00	1140.00
IUUC-Bta-012382	Bos taurus	72.59	0.00e+00	1281.00
IUUC-Bci-013937	Botrytis cinerea	65.22	0.00e+00	1134.00
IUUC-Bdi-014612	Brachypodium distachyon	85.43	0.00e+00	1930.00
IUUC-Bol-015145	Brassica oleracea	79.45	0.00e+00	1895.00
IUUC-Bra-017370	Brassica rapa	77.91	0.00e+00	1860.00
IUUC-Cel-018240	Caenorhabditis elegans	56.38	0.00e+00	942.00
IUUC-Cja-019892	Callithrix jacchus	73.58	0.00e+00	1288.00
IUUC-Cfa-020700	Canis familiaris	72.59	0.00e+00	1281.00
IUUC-Cpo-021510	Cavia porcellus	72.72	0.00e+00	1281.00
IUUC-Cre-022731	Chlamydomonas reinhardtii	65.63	0.00e+00	1079.00
IUUC-Csa-023665	Chlorocebus sabaeus	73.58	0.00e+00	1291.00
IUUC-Cin-025798	Ciona intestinalis	71.37	0.00e+00	1161.00
IUUC-Csv-025901	Ciona savignyi	66.79	0.00e+00	1171.00
IUUC-Cgl-026653	Colletotrichum gloeosporioides	64.21	0.00e+00	1104.00
IUUC-Cne-027014	Cryptococcus neoformans	68.60	0.00e+00	1198.00
IUUC-Dre-028705	Danio rerio	73.61	0.00e+00	1283.00
IUUC-Dor-030369	Dipodomys ordii	71.23	0.00e+00	1239.00
IUUC-Dme-031767	Drosophila melanogaster	64.80	0.00e+00	1151.00
IUUC-Ete-032800	Echinops telfairi	34.52	4.00e-55	209.00
IUUC-Eca-033840	Equus caballus	73.58	0.00e+00	1288.00
IUUC-Fca-035466	Felis catus	72.51	0.00e+00	1278.00
IUUC-Fal-037548	Ficedula albicollis	73.34	0.00e+00	1278.00
IUUC-Fox-038023	Fusarium oxysporum	64.08	0.00e+00	1102.00
IUUC-Gmo-039285	Gadus morhua	71.78	0.00e+00	1265.00
IUUC-Ggr-039810	Gaeumannomyces graminis	64.25	0.00e+00	1135.00
IUUC-Gga-040972	Gallus gallus	73.58	0.00e+00	1290.00
IUUC-Gac-042075	Gasterosteus aculeatus	61.54	0.00e+00	1292.00
IUUC-Gma-042713	Glycine max	89.46	0.00e+00	2160.00
IUUC-Ggo-045398	Gorilla gorilla	73.58	0.00e+00	1288.00
IUUC-Hsa-046152	Homo sapiens	73.58	0.00e+00	1291.00
IUUC-Hvu-047555	Hordeum vulgare	95.00	0.00e+00	927.00
IUUC-Itr-048247	Ictidomys tridecemlineatus	72.82	0.00e+00	1269.00
IUUC-Kpa-049205	Komagataella pastoris	51.38	0.00e+00	764.00
IUUC-Lch-049587	Latimeria chalumnae	73.85	0.00e+00	799.00
IUUC-Lpe-051059	Leersia perrieri	85.23	0.00e+00	1919.00
IUUC-Loc-051911	Lepisosteus oculatus	71.95	0.00e+00	1288.00
IUUC-Lma-053007	Leptosphaeria maculans	65.31	0.00e+00	1131.00
IUUC-Laf-054234	Loxodonta africana	72.59	0.00e+00	1281.00
IUUC-Mcc-054762	Macaca mulatta	72.59	0.00e+00	1281.00
IUUC-Meu-056677	Macropus eugenii	70.29	7.00e-134	471.00
IUUC-Mor-057147	Magnaporthe oryzae	65.56	0.00e+00	1134.00
IUUC-Mpo-057314	Magnaporthe poae	64.37	0.00e+00	1137.00
IUUC-Mtr-058329	Medicago truncatula	88.10	0.00e+00	2189.00
IUUC-Mla-059094	Melampsora laricipopulina	62.13	0.00e+00	634.00
IUUC-Mga-060126	Meleagris gallopavo	72.14	0.00e+00	1262.00
IUUC-Mvi-060373	Microbotryum violaceum	68.56	0.00e+00	1238.00
IUUC-Mmr-060628	Microcebus murinus	72.59	0.00e+00	1281.00
IUUC-Mdo-061858	Monodelphis domestica	73.58	0.00e+00	1287.00
IUUC-Mmu-064116	Mus musculus	73.46	0.00e+00	1290.00
IUUC-Mac-065136	Musa acuminata	88.32	0.00e+00	2001.00
IUUC-Mpu-066463	Mustela putorius furo	73.58	0.00e+00	1291.00
IUUC-Mlu-068098	Myotis lucifugus	73.58	0.00e+00	1291.00
IUUC-Nfi-068370	Neosartorya fischeri	67.40	0.00e+00	1147.00
IUUC-Ncr-068792	Neurospora crassa	64.74	0.00e+00	1113.00
IUUC-Nle-070102	Nomascus leucogenys	73.58	0.00e+00	1284.00
IUUC-Opr-070620	Ochotona princeps	69.26	0.00e+00	1176.00
IUUC-Ont-072685	Oreochromis niloticus	62.14	0.00e+00	1282.00
IUUC-Oan-073665	Ornithorhynchus anatinus	71.10	0.00e+00	1285.00
IUUC-Ocu-074154	Oryctolagus cuniculus	33.33	5.00e-56	212.00
IUUC-Oba-075075	Oryza barthii	83.55	0.00e+00	1652.00
IUUC-Obr-076183	Oryza brachyantha	86.82	0.00e+00	1763.00
IUUC-Ogl-077691	Oryza glaberrima	87.78	0.00e+00	1966.00
IUUC-Ogu-078423	Oryza glumaepatula	86.19	0.00e+00	1922.00
IUUC-Oin-080107	Oryza indica	87.71	0.00e+00	1969.00
IUUC-Olo-080269	Oryza longistaminata	87.42	0.00e+00	1871.00
IUUC-Ome-081779	Oryza meridionalis	86.19	0.00e+00	1920.00
IUUC-Oni-082366	Oryza nivara	87.71	0.00e+00	1968.00
IUUC-Opu-083958	Oryza punctata	83.99	0.00e+00	1919.00
IUUC-Oru-084182	Oryza rufipogon	87.71	0.00e+00	1967.00
IUUC-Osa-085285	Oryza sativa	87.65	0.00e+00	1970.00
IUUC-Ola-086954	Oryzias latipes	69.70	0.00e+00	1237.00
IUUC-Olu-087685	Ostreococcus lucimarinus	62.12	0.00e+00	1012.00
IUUC-Oga-088591	Otolemur garnettii	73.58	0.00e+00	1291.00
IUUC-Oar-089417	Ovis aries	72.47	0.00e+00	1278.00
IUUC-Ptr-091510	Pan troglodytes	72.84	0.00e+00	1268.00
IUUC-Pan-091886	Papio anubis	73.58	0.00e+00	1291.00
IUUC-Psi-093755	Pelodiscus sinensis	71.28	0.00e+00	864.00
IUUC-Pma-094470	Petromyzon marinus	71.89	0.00e+00	1279.00
IUUC-Pno-094963	Phaeosphaeria nodorum	66.09	0.00e+00	1125.00
IUUC-Ppa-095479	Physcomitrella patens	78.53	0.00e+00	1769.00
IUUC-Pfo-097456	Poecilia formosa	62.33	0.00e+00	1285.00
IUUC-Pab-098075	Pongo abelii	68.94	0.00e+00	1181.00
IUUC-Pop-099557	Populus trichocarpa	87.91	0.00e+00	2176.00
IUUC-Pca-100717	Procavia capensis	75.93	7.00e-140	491.00
IUUC-Ppe-101675	Prunus persica	91.03	0.00e+00	2248.00
IUUC-Pva-103029	Pteropus vampyrus	74.63	0.00e+00	984.00
IUUC-Pgr-103318	Puccinia graminis	61.95	0.00e+00	1158.00
IUUC-Ptt-103956	Puccinia triticina	63.23	0.00e+00	1159.00
IUUC-Pte-104399	Pyrenophora teres	65.31	0.00e+00	1131.00
IUUC-Pyt-104749	Pyrenophora triticirepentis	65.31	0.00e+00	1131.00
IUUC-Rno-105784	Rattus norvegicus	73.46	0.00e+00	1290.00
IUUC-Sce-106206	Saccharomyces cerevisiae	57.09	0.00e+00	931.00
IUUC-Sha-106566	Sarcophilus harrisii	72.54	0.00e+00	1276.00
IUUC-Sja-107721	Schizosaccharomyces japonicus	62.52	0.00e+00	1059.00
IUUC-Spo-108258	Schizosaccharomyces pombe	58.33	0.00e+00	1023.00
IUUC-Ssl-108640	Sclerotinia sclerotiorum	62.35	0.00e+00	982.00
IUUC-Smo-109676	Selaginella moellendorffii	22.64	9.20e-01	28.50
IUUC-Sit-109760	Setaria italica	85.85	0.00e+00	1960.00
IUUC-Sly-111807	Solanum lycopersicum	87.38	0.00e+00	2120.00
IUUC-Stu-112869	Solanum tuberosum	86.29	0.00e+00	1909.00
IUUC-Sar-112950	Sorex araneus	32.14	3.00e-42	166.00
IUUC-Sbi-114863	Sorghum bicolor	85.75	0.00e+00	1941.00
IUUC-Sre-115092	Sporisorium reilianum	70.67	0.00e+00	1210.00
IUUC-Tgu-117214	Taeniopygia guttata	67.39	0.00e+00	1145.00
IUUC-Tru-118386	Takifugu rubripes	71.40	0.00e+00	1256.00
IUUC-Tsy-119550	Tarsius syrichta	69.47	1.00e-115	410.00
IUUC-Tni-120212	Tetraodon nigroviridis	62.29	0.00e+00	1234.00
IUUC-Tre-122245	Trichoderma reesei	33.49	4.00e-52	200.00
IUUC-Tvi-122452	Trichoderma virens	63.30	0.00e+00	1084.00
IUUC-Tae-123692	Triticum aestivum	85.71	0.00e+00	1935.00
IUUC-Tur-126770	Triticum urartu	85.20	0.00e+00	1037.00
IUUC-Tme-126956	Tuber melanosporum	66.55	0.00e+00	1177.00
IUUC-Tbe-127873	Tupaia belangeri	31.78	9.00e-48	184.00
IUUC-Ttr-128212	Tursiops truncatus	68.89	0.00e+00	1175.00
IUUC-Uma-129327	Ustilago maydis	70.42	0.00e+00	1209.00
IUUC-Vda-129858	Verticillium dahliae	64.40	0.00e+00	1078.00
IUUC-Vpa-130743	Vicugna pacos	32.46	5.00e-51	195.00
IUUC-Vvi-131222	Vitis vinifera	91.89	0.00e+00	2175.00
IUUC-Xtr-131800	Xenopus tropicalis	66.44	0.00e+00	1025.00
IUUC-Xma-133216	Xiphophorus maculatus	62.43	0.00e+00	1285.00
IUUC-Yli-134482	Yarrowia lipolytica	52.70	0.00e+00	878.00
IUUC-Zma-134802	Zea mays	83.97	0.00e+00	1954.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence