iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115595

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP565722

Gene Name

GNB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000021890.1	ENSSSCT00000025244.1	ENSSSCP00000027098.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-40	135.2	182	220
UBD/Beta-Prp	1.00e-52	179.5	47	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +l++ +d +++vsG+ D +ik+WD+r+  + +
   Q: 182  GHSGDVMSLSLaPDgRTFVSGACDASIKLWDVRDSMCRQ 220
           8***********99999****************988866 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee. 131
           + r+l gh a+++a+ +  d+ +lv++s+D+ + +wd  t   vh++   ++ v+++++ psg++++ G+ d++  ++ l+t++     
   Q: 47   TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRv 135
           5689*****************************************************************************99877666 PP
   S: 132  ..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
              l gh+g  +c ++ + +n ++++s D+t+ lWd++tg+    + g h ++v sls+ ++g+ +vsg++d ++klwd++ + c +t+
   Q: 136  srELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF 222
           779*************99.7778999********************99.**************************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvi 268
           +gh++ ++ v+f+pn+  + +gs+D + r++dlr ++ l ++++ n  +i
   Q: 223  IGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDN--II 270
           ***************************************9999854..55 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSELEQLRQE AEQLRNQIRD ARKACGDSTL TQITAGLDPV GRIQMRTRRT LRGHLAKIYA 60
MHWGTDSRLL VSASQDGKLI IWDSYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCATCCGC GTCGCCGCCG CTGCCGCCTC CGCCGCGGAG GAAGACAGGA CCTCCCGCTC 60
TCCTTTAGCG ACCCTTCGCA GAGTCCCACC GCCACAGGTA CCTCCGCTGG TAAAAGGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0005615--C:extracellular space
GO:0005925--C:focal adhesion
GO:0005765--C:lysosomal membrane
GO:0043209--C:myelin sheath
GO:0048471--C:perinuclear region of cytoplasm
GO:0007165--P:signal transduction

KEGG

ssc:100516546

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001395	Ailuropoda melanoleuca	99.07	0.00e+00	658.00
IUUC-Apl-003811	Anas platyrhynchos	90.59	0.00e+00	626.00
IUUC-Aca-004754	Anolis carolinensis	89.78	2.00e-169	587.00
IUUC-Ago-007831	Ashbya gossypii	38.24	3.00e-68	252.00
IUUC-Acl-008154	Aspergillus clavatus	66.17	1.00e-135	475.00
IUUC-Afu-008789	Aspergillus fumigatus	66.17	1.00e-135	475.00
IUUC-Ate-010520	Aspergillus terreus	61.13	3.00e-109	387.00
IUUC-Ame-011124	Astyanax mexicanus	94.12	0.00e+00	637.00
IUUC-Bgr-012079	Blumeria graminis	65.19	5.00e-132	463.00
IUUC-Bta-013430	Bos taurus	100.00	0.00e+00	665.00
IUUC-Cel-018704	Caenorhabditis elegans	85.29	5.00e-180	622.00
IUUC-Cja-019794	Callithrix jacchus	100.00	0.00e+00	665.00
IUUC-Cfa-020395	Canis familiaris	89.47	2.00e-176	610.00
IUUC-Cpo-021865	Cavia porcellus	100.00	0.00e+00	665.00
IUUC-Csa-023572	Chlorocebus sabaeus	100.00	0.00e+00	665.00
IUUC-Cho-024766	Choloepus hoffmanni	88.92	4.00e-177	613.00
IUUC-Cin-025309	Ciona intestinalis	80.18	2.00e-169	588.00
IUUC-Csv-026258	Ciona savignyi	80.47	9.00e-170	588.00
IUUC-Cgl-026673	Colletotrichum gloeosporioides	65.50	4.00e-136	477.00
IUUC-Dre-027957	Danio rerio	94.43	0.00e+00	634.00
IUUC-Dno-029001	Dasypus novemcinctus	100.00	0.00e+00	665.00
IUUC-Dor-030322	Dipodomys ordii	88.85	2.00e-166	578.00
IUUC-Dme-031748	Drosophila melanogaster	81.47	1.00e-172	598.00
IUUC-Ete-032710	Echinops telfairi	88.64	8.00e-167	578.00
IUUC-Eca-034149	Equus caballus	100.00	0.00e+00	665.00
IUUC-Eeu-034978	Erinaceus europaeus	87.91	2.00e-144	504.00
IUUC-Fca-036537	Felis catus	100.00	0.00e+00	665.00
IUUC-Fal-037004	Ficedula albicollis	90.59	0.00e+00	626.00
IUUC-Fox-037946	Fusarium oxysporum	65.79	3.00e-131	461.00
IUUC-Fso-038136	Fusarium solani	65.79	3.00e-131	461.00
IUUC-Gmo-039332	Gadus morhua	94.74	0.00e+00	634.00
IUUC-Ggr-039969	Gaeumannomyces graminis	65.20	8.00e-135	473.00
IUUC-Gga-040249	Gallus gallus	89.78	1.00e-169	588.00
IUUC-Gac-041932	Gasterosteus aculeatus	93.19	0.00e+00	629.00
IUUC-Ggo-044543	Gorilla gorilla	100.00	0.00e+00	665.00
IUUC-Hsa-046432	Homo sapiens	100.00	0.00e+00	665.00
IUUC-Itr-048049	Ictidomys tridecemlineatus	100.00	0.00e+00	686.00
IUUC-Kpa-049192	Komagataella pastoris	38.06	3.00e-62	231.00
IUUC-Lch-049422	Latimeria chalumnae	90.29	0.00e+00	625.00
IUUC-Loc-052939	Lepisosteus oculatus	90.59	0.00e+00	652.00
IUUC-Laf-053865	Loxodonta africana	100.00	0.00e+00	665.00
IUUC-Mcc-055781	Macaca mulatta	100.00	0.00e+00	631.00
IUUC-Meu-056902	Macropus eugenii	99.38	0.00e+00	662.00
IUUC-Mor-057188	Magnaporthe oryzae	64.91	4.00e-134	470.00
IUUC-Mpo-057544	Magnaporthe poae	64.91	3.00e-135	474.00
IUUC-Mla-059086	Melampsora laricipopulina	70.62	2.00e-149	521.00
IUUC-Mga-060050	Meleagris gallopavo	89.51	2.00e-168	584.00
IUUC-Mmr-061015	Microcebus murinus	100.00	0.00e+00	665.00
IUUC-Mdo-062734	Monodelphis domestica	99.38	0.00e+00	662.00
IUUC-Mmu-063737	Mus musculus	100.00	0.00e+00	665.00
IUUC-Mpu-066784	Mustela putorius furo	99.68	0.00e+00	637.00
IUUC-Mlu-067912	Myotis lucifugus	99.69	0.00e+00	663.00
IUUC-Nfi-068332	Neosartorya fischeri	66.17	3.00e-135	474.00
IUUC-Ncr-068650	Neurospora crassa	64.62	7.00e-128	449.00
IUUC-Nle-069612	Nomascus leucogenys	89.47	2.00e-176	611.00
IUUC-Opr-070866	Ochotona princeps	100.00	0.00e+00	665.00
IUUC-Ont-072526	Oreochromis niloticus	93.50	0.00e+00	629.00
IUUC-Oan-072780	Ornithorhynchus anatinus	90.29	0.00e+00	625.00
IUUC-Ocu-074344	Oryctolagus cuniculus	100.00	0.00e+00	665.00
IUUC-Ola-087490	Oryzias latipes	90.29	5.00e-180	622.00
IUUC-Oga-089046	Otolemur garnettii	100.00	0.00e+00	665.00
IUUC-Oar-089822	Ovis aries	93.50	3.00e-177	613.00
IUUC-Ptr-091444	Pan troglodytes	100.00	0.00e+00	665.00
IUUC-Pan-092045	Papio anubis	100.00	0.00e+00	665.00
IUUC-Psi-093225	Pelodiscus sinensis	90.59	0.00e+00	626.00
IUUC-Pma-094748	Petromyzon marinus	90.87	4.00e-139	486.00
IUUC-Pfo-097028	Poecilia formosa	90.59	0.00e+00	652.00
IUUC-Pab-097601	Pongo abelii	99.07	0.00e+00	660.00
IUUC-Pca-100940	Procavia capensis	100.00	0.00e+00	665.00
IUUC-Pva-102229	Pteropus vampyrus	99.69	0.00e+00	658.00
IUUC-Pgr-103321	Puccinia graminis	71.51	7.00e-150	523.00
IUUC-Ptt-103728	Puccinia triticina	71.51	7.00e-150	523.00
IUUC-Rno-106104	Rattus norvegicus	100.00	0.00e+00	665.00
IUUC-Sha-107632	Sarcophilus harrisii	99.38	0.00e+00	662.00
IUUC-Sja-107891	Schizosaccharomyces japonicus	35.91	2.00e-58	218.00
IUUC-Sar-113642	Sorex araneus	91.54	1.00e-150	525.00
IUUC-Tgu-117198	Taeniopygia guttata	89.78	1.00e-169	588.00
IUUC-Tru-118401	Takifugu rubripes	93.19	0.00e+00	628.00
IUUC-Tsy-119354	Tarsius syrichta	87.62	4.00e-174	603.00
IUUC-Tni-120216	Tetraodon nigroviridis	92.88	0.00e+00	627.00
IUUC-Tre-122156	Trichoderma reesei	65.50	3.00e-135	474.00
IUUC-Tvi-122640	Trichoderma virens	65.50	3.00e-135	474.00
IUUC-Tme-126886	Tuber melanosporum	67.96	3.00e-134	471.00
IUUC-Tbe-128132	Tupaia belangeri	99.22	2.00e-148	517.00
IUUC-Ttr-128403	Tursiops truncatus	100.00	0.00e+00	665.00
IUUC-Vda-129855	Verticillium dahliae	70.16	4.00e-129	453.00
IUUC-Vpa-130474	Vicugna pacos	97.79	3.00e-76	278.00
IUUC-Xtr-131924	Xenopus tropicalis	89.78	2.00e-169	588.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence