iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nle-069824

Ensembl Protein ID

ENSNLEP00000012582.2

UniProt Accession

G1RH82; G1RH82_NOMLE

Genbank Protein ID

ENSNLEP00000012582

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01131485

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000010320.2	ENSNLET00000013197.2	ENSNLEP00000012582.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.10e-17	62.1	135	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 135  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 180
           79*********....9******************.*******7.******86 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MVEMTLSLLG NQELSEMMAG SRPSVVAVVG YHHCCFSGPG VRKKIKGSKD GKKKGKGKKM 60
AGLKFRFGGI SNKRKKGSSS EEDEREESDF DSASIHSASV RSDWLCAGSA DEAFHDCLSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGCTCAG GCATGGACCA CAGGTGGGCG GCTGTGCCTT CAGTGGCCCT GCTGGCTGTG 60
GGGGATGGCT AGTGCCTCCT TTCAGTGGTT GGAGACAGTA TAGGGGCTCC TTCCACAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	93.45	0.00e+00	2771.00
IUUC-Apl-003406	Anas platyrhynchos	78.52	0.00e+00	2288.00
IUUC-Aca-004671	Anolis carolinensis	81.35	0.00e+00	2463.00
IUUC-Aly-005645	Arabidopsis lyrata	39.58	5.00e-153	536.00
IUUC-Ath-007406	Arabidopsis thaliana	40.23	1.00e-157	551.00
IUUC-Ame-011883	Astyanax mexicanus	84.41	0.00e+00	1998.00
IUUC-Bta-012951	Bos taurus	88.85	0.00e+00	2559.00
IUUC-Bol-016073	Brassica oleracea	40.93	6.00e-157	549.00
IUUC-Bra-016724	Brassica rapa	41.16	6.00e-158	552.00
IUUC-Cel-018108	Caenorhabditis elegans	57.28	0.00e+00	1311.00
IUUC-Cja-018871	Callithrix jacchus	88.43	0.00e+00	2597.00
IUUC-Cfa-021063	Canis familiaris	94.20	0.00e+00	2726.00
IUUC-Cpo-022083	Cavia porcellus	90.74	0.00e+00	2615.00
IUUC-Csa-023084	Chlorocebus sabaeus	96.25	0.00e+00	2901.00
IUUC-Cin-025596	Ciona intestinalis	55.92	2.00e-61	230.00
IUUC-Dre-028226	Danio rerio	76.37	0.00e+00	2328.00
IUUC-Dno-029923	Dasypus novemcinctus	94.10	0.00e+00	1763.00
IUUC-Dme-032150	Drosophila melanogaster	60.68	0.00e+00	1423.00
IUUC-Eca-034372	Equus caballus	93.71	0.00e+00	2676.00
IUUC-Fca-036048	Felis catus	93.69	0.00e+00	2707.00
IUUC-Fal-037282	Ficedula albicollis	86.19	0.00e+00	2556.00
IUUC-Gga-040607	Gallus gallus	86.84	0.00e+00	2313.00
IUUC-Ggo-044514	Gorilla gorilla	96.31	0.00e+00	2925.00
IUUC-Hsa-046181	Homo sapiens	96.48	0.00e+00	2902.00
IUUC-Loc-052795	Lepisosteus oculatus	79.04	0.00e+00	2454.00
IUUC-Laf-053749	Loxodonta africana	93.97	0.00e+00	2781.00
IUUC-Mcc-055856	Macaca mulatta	96.19	0.00e+00	2897.00
IUUC-Mga-059630	Meleagris gallopavo	86.37	0.00e+00	2617.00
IUUC-Mmr-060986	Microcebus murinus	92.30	0.00e+00	2689.00
IUUC-Mmu-063644	Mus musculus	92.09	0.00e+00	2751.00
IUUC-Mpu-066528	Mustela putorius furo	89.40	0.00e+00	2661.00
IUUC-Ont-072647	Oreochromis niloticus	74.85	0.00e+00	2313.00
IUUC-Oan-072885	Ornithorhynchus anatinus	77.10	0.00e+00	1648.00
IUUC-Ola-086961	Oryzias latipes	73.26	0.00e+00	2220.00
IUUC-Oga-088775	Otolemur garnettii	95.20	0.00e+00	2746.00
IUUC-Oar-090301	Ovis aries	93.88	0.00e+00	2605.00
IUUC-Ptr-090586	Pan troglodytes	95.25	0.00e+00	2873.00
IUUC-Pan-092282	Papio anubis	96.22	0.00e+00	2856.00
IUUC-Psi-093007	Pelodiscus sinensis	86.34	0.00e+00	2159.00
IUUC-Pfo-096802	Poecilia formosa	74.95	0.00e+00	2055.00
IUUC-Pab-097677	Pongo abelii	98.00	0.00e+00	2319.00
IUUC-Pca-100559	Procavia capensis	89.80	0.00e+00	2591.00
IUUC-Pva-102508	Pteropus vampyrus	94.04	0.00e+00	1816.00
IUUC-Rno-105378	Rattus norvegicus	92.68	0.00e+00	2716.00
IUUC-Sha-107350	Sarcophilus harrisii	85.01	0.00e+00	2546.00
IUUC-Smo-108946	Selaginella moellendorffii	36.69	1.00e-165	578.00
IUUC-Ssc-116303	Sus scrofa	94.01	0.00e+00	2457.00
IUUC-Tgu-116779	Taeniopygia guttata	79.98	0.00e+00	2266.00
IUUC-Tru-117597	Takifugu rubripes	76.33	0.00e+00	2318.00
IUUC-Ttr-128301	Tursiops truncatus	92.14	0.00e+00	2722.00
IUUC-Xtr-132668	Xenopus tropicalis	78.61	0.00e+00	2407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence