iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114185

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G109400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g008950	Sb04g008950.1	Sb04g008950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-09	37.7	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++++g  ++ lp C Hvfh++C+ kw       +++ +CP+Cr
   Q: 118  CAVCLGEMETGdmVKRLPvCLHVFHQQCVDKW------LKNNSTCPVCR 160
           ********77755666779*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDWCDRCAHV FMLAFLNSFF LGSTGIIVYV LARDHSISTS GTVMVSVVLV FWVLIGAFFY 60
FVSCGAFILC CVRRIGWLPR PSAGGGGGST LPAAADIPAY ELRDAGHGQA DGGASADCAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACTGGT GCGACCGCTG CGCCCACGTG TTCATGCTGG CCTTCCTCAA CTCCTTCTTC 60
CTGGGCAGCA CGGGGATTAT CGTCTACGTG CTCGCGCGAG ATCACTCCAT CAGCACGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g008950

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001378	Ailuropoda melanoleuca	50.94	1.00e-13	71.60
IUUC-Apl-003634	Anas platyrhynchos	50.94	1.00e-13	71.60
IUUC-Bgr-012030	Blumeria graminis	45.95	4.00e-07	49.30
IUUC-Bta-012823	Bos taurus	50.94	1.00e-13	71.60
IUUC-Cja-018850	Callithrix jacchus	49.09	4.00e-12	66.60
IUUC-Cfa-021062	Canis familiaris	50.94	1.00e-13	71.60
IUUC-Cpo-021467	Cavia porcellus	50.94	1.00e-13	71.60
IUUC-Csa-024048	Chlorocebus sabaeus	50.94	1.00e-13	71.60
IUUC-Cho-024278	Choloepus hoffmanni	50.94	1.00e-13	71.60
IUUC-Dre-028323	Danio rerio	52.00	1.00e-12	68.20
IUUC-Ete-032985	Echinops telfairi	50.94	2.00e-13	71.20
IUUC-Eca-033659	Equus caballus	50.94	1.00e-13	71.60
IUUC-Eeu-034773	Erinaceus europaeus	50.94	1.00e-13	71.20
IUUC-Fca-035560	Felis catus	50.94	1.00e-13	71.60
IUUC-Fal-037598	Ficedula albicollis	50.94	1.00e-13	71.60
IUUC-Gga-040900	Gallus gallus	50.94	1.00e-13	71.60
IUUC-Ggo-044921	Gorilla gorilla	50.94	1.00e-13	71.60
IUUC-Hsa-046529	Homo sapiens	50.94	1.00e-13	71.60
IUUC-Itr-048765	Ictidomys tridecemlineatus	50.94	1.00e-13	71.60
IUUC-Laf-053804	Loxodonta africana	50.94	8.00e-14	72.00
IUUC-Mcc-055297	Macaca mulatta	50.94	1.00e-13	71.60
IUUC-Meu-056052	Macropus eugenii	50.94	1.00e-13	71.60
IUUC-Mga-059350	Meleagris gallopavo	50.94	1.00e-13	71.60
IUUC-Mmr-061666	Microcebus murinus	50.94	1.00e-13	71.60
IUUC-Mdo-061958	Monodelphis domestica	50.94	1.00e-13	71.60
IUUC-Mmu-063900	Mus musculus	50.94	1.00e-13	71.60
IUUC-Mpu-066492	Mustela putorius furo	50.94	1.00e-13	71.60
IUUC-Mlu-067464	Myotis lucifugus	49.09	3.00e-12	66.60
IUUC-Nle-070038	Nomascus leucogenys	50.94	1.00e-13	71.60
IUUC-Ont-072297	Oreochromis niloticus	49.06	9.00e-13	68.60
IUUC-Ocu-074713	Oryctolagus cuniculus	50.94	1.00e-13	71.60
IUUC-Oga-088809	Otolemur garnettii	49.09	3.00e-12	66.60
IUUC-Oar-090286	Ovis aries	50.94	1.00e-13	71.60
IUUC-Ptr-091451	Pan troglodytes	50.94	1.00e-13	71.60
IUUC-Pan-092593	Papio anubis	49.09	3.00e-12	66.60
IUUC-Psi-093662	Pelodiscus sinensis	50.94	1.00e-13	71.60
IUUC-Pfo-096611	Poecilia formosa	49.06	1.00e-12	68.60
IUUC-Pab-097885	Pongo abelii	50.94	1.00e-13	71.60
IUUC-Pca-100561	Procavia capensis	50.94	1.00e-13	71.60
IUUC-Pva-102891	Pteropus vampyrus	50.94	1.00e-13	71.60
IUUC-Rno-105327	Rattus norvegicus	50.94	1.00e-13	71.60
IUUC-Sha-107401	Sarcophilus harrisii	50.94	1.00e-13	71.60
IUUC-Sit-109909	Setaria italica	62.67	6.00e-25	106.00
IUUC-Sar-113238	Sorex araneus	50.94	1.00e-13	71.60
IUUC-Ssc-116436	Sus scrofa	50.94	1.00e-13	71.60
IUUC-Tgu-116470	Taeniopygia guttata	50.94	1.00e-13	71.60
IUUC-Ttr-128623	Tursiops truncatus	50.94	1.00e-13	71.60
IUUC-Vpa-130662	Vicugna pacos	50.94	1.00e-13	71.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence