iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000001146.1	ENSFALT00000001214.1	ENSFALP00000001208.1
ENSFALG00000001146.1	ENSFALT00000001216.1	ENSFALP00000001210.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/CARD	54.94	0.00e+00	932.00	IUUC-Hsa-046671

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

GGGGGGALFL DAVLLLEAEG WLRGFLDALV AAGYTGLAEA IENWDFSKLE KLELHRQLLK 60
RIEATMLEVD PVAIMPYINT CLIERDCDEI LQISEYRSKA AGITKLIECL CRSDKENWPK 120

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Nucleotide Sequence
(Fasta)

GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG 60
GGGGGGGGGG CGCTGTTCCT GGATGCCGTG CTGCTGCTGG AGGCGGAGGG CTGGCTCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR031964--CARD_dom
IPR011545--DEAD/DEAH_box_helicase_dom
IPR011029--DEATH-like_dom
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00270--DEAD
PF00271--Helicase_C
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0005923--C:bicellular tight junction
GO:0005829--C:cytosol
GO:0032587--C:ruffle membrane
GO:0005524--F:ATP binding
GO:0003690--F:double-stranded DNA binding
GO:0003725--F:double-stranded RNA binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0003727--F:single-stranded RNA binding
GO:0008270--F:zinc ion binding
GO:0009597--P:detection of virus
GO:0045087--P:innate immune response
GO:0002230--P:positive regulation of defense response to virus by host
GO:0032725--P:positive regulation of granulocyte macrophage colony-stimulating factor production
GO:0032727--P:positive regulation of interferon-alpha production
GO:0032728--P:positive regulation of interferon-beta production
GO:0032755--P:positive regulation of interleukin-6 production
GO:0032757--P:positive regulation of interleukin-8 production
GO:0042993--P:positive regulation of transcription factor import into nucleus
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043330--P:response to exogenous dsRNA
GO:0039529--P:RIG-I signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001898	Ailuropoda melanoleuca	53.87	0.00e+00	909.00
IUUC-Apl-003966	Anas platyrhynchos	77.87	0.00e+00	1373.00
IUUC-Aca-004499	Anolis carolinensis	50.68	0.00e+00	836.00
IUUC-Ame-011950	Astyanax mexicanus	42.19	0.00e+00	655.00
IUUC-Bta-012489	Bos taurus	54.16	0.00e+00	898.00
IUUC-Cel-018230	Caenorhabditis elegans	27.49	4.00e-61	229.00
IUUC-Cja-018716	Callithrix jacchus	54.83	0.00e+00	917.00
IUUC-Cfa-020269	Canis familiaris	54.38	0.00e+00	918.00
IUUC-Cpo-022507	Cavia porcellus	53.51	0.00e+00	891.00
IUUC-Csa-024209	Chlorocebus sabaeus	54.55	0.00e+00	933.00
IUUC-Cho-025104	Choloepus hoffmanni	50.38	0.00e+00	767.00
IUUC-Cin-025792	Ciona intestinalis	30.06	3.00e-74	272.00
IUUC-Cgl-026385	Colletotrichum gloeosporioides	26.49	3.00e-28	121.00
IUUC-Dno-028954	Dasypus novemcinctus	53.36	0.00e+00	874.00
IUUC-Eca-034039	Equus caballus	54.24	0.00e+00	914.00
IUUC-Eeu-035009	Erinaceus europaeus	51.32	0.00e+00	662.00
IUUC-Fca-036169	Felis catus	54.17	0.00e+00	937.00
IUUC-Ggo-045318	Gorilla gorilla	53.00	0.00e+00	901.00
IUUC-Hsa-046671	Homo sapiens	54.30	0.00e+00	919.00
IUUC-Itr-047996	Ictidomys tridecemlineatus	53.55	0.00e+00	884.00
IUUC-Lch-050461	Latimeria chalumnae	51.98	0.00e+00	913.00
IUUC-Loc-052582	Lepisosteus oculatus	49.10	0.00e+00	804.00
IUUC-Laf-054324	Loxodonta africana	53.34	0.00e+00	885.00
IUUC-Mcc-055390	Macaca mulatta	54.43	0.00e+00	927.00
IUUC-Meu-056365	Macropus eugenii	56.94	5.00e-108	385.00
IUUC-Mmr-061407	Microcebus murinus	53.48	0.00e+00	931.00
IUUC-Mmu-063939	Mus musculus	54.90	0.00e+00	917.00
IUUC-Mpu-066226	Mustela putorius furo	52.28	0.00e+00	884.00
IUUC-Mlu-068092	Myotis lucifugus	55.72	0.00e+00	918.00
IUUC-Nfi-068405	Neosartorya fischeri	25.00	2.00e-28	121.00
IUUC-Opr-070246	Ochotona princeps	46.83	2.00e-125	443.00
IUUC-Oan-072742	Ornithorhynchus anatinus	55.64	0.00e+00	858.00
IUUC-Ocu-073959	Oryctolagus cuniculus	52.68	0.00e+00	881.00
IUUC-Oga-089173	Otolemur garnettii	53.37	0.00e+00	896.00
IUUC-Oar-089369	Ovis aries	53.93	0.00e+00	873.00
IUUC-Ptr-091032	Pan troglodytes	54.30	0.00e+00	919.00
IUUC-Pan-092383	Papio anubis	54.60	0.00e+00	932.00
IUUC-Psi-093432	Pelodiscus sinensis	65.78	0.00e+00	1197.00
IUUC-Pma-094367	Petromyzon marinus	41.24	1.00e-111	397.00
IUUC-Pab-098416	Pongo abelii	54.90	0.00e+00	909.00
IUUC-Pca-101006	Procavia capensis	56.35	2.00e-128	452.00
IUUC-Pva-102966	Pteropus vampyrus	55.44	0.00e+00	930.00
IUUC-Rno-105059	Rattus norvegicus	52.10	1.00e-153	536.00
IUUC-Ssl-108450	Sclerotinia sclerotiorum	26.59	6.00e-05	44.30
IUUC-Sar-113202	Sorex araneus	50.14	0.00e+00	670.00
IUUC-Ssc-116120	Sus scrofa	53.11	0.00e+00	872.00
IUUC-Tgu-117314	Taeniopygia guttata	89.49	0.00e+00	1563.00
IUUC-Tsy-119453	Tarsius syrichta	53.38	2.00e-157	549.00
IUUC-Ttr-128421	Tursiops truncatus	50.58	0.00e+00	741.00
IUUC-Vpa-130602	Vicugna pacos	51.11	0.00e+00	864.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence