• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105814
UUCD1 version UUC-RaN-00275
Ensembl Protein ID ENSRNOP00000051732.2
UniProt Accession D3ZTJ7; D3ZTJ7_RAT
Genbank Protein ID EDM12402.1
Protein Name F-box and leucine-rich repeat protein 11 (Predicted); Lysine demethylase 2A
Genbank Nucleotide ID AABR07006093
Gene Name Kdm2a; Fbxl11_predicted; rCG_48558
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000019145.5 ENSRNOT00000054850.2 ENSRNOP00000051732.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 4.00e-10 40.1 619 677
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedek......slveCekCrewfHpaClkls....veeelpnsekwiCpkCrs 53
            C +Cge +++e+      +l+eC++C+e++Hp+Cl++      +eelpn+  w+CpkC +
   Q: 619  TCSLCGEVDQNEEtqdfekKLMECCICNEIVHPGCLQMDgeglLNEELPNC--WECPKCYQ 677
           7*********995555666***********************99*******..******76 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MEPEEERIRY SQRLRGTMRR RYEDDGISDD EIEGKRTFDL EEKLHTNKYN ANFVTFMEGK 60
DFNVEYIQRG GLRDPLIFKN SDGLGIKMPD PDFTVNDVKM CVGSRRMVDV MDVNTQKGIE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105814|E3,PHD|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGGCTTCGGA AGCGGCTGTG ACCGTCTGAG GGTACCGAGA AGAGGGTGTT TCCCGCGGCC 60
GGGTTGGCCC GGGTTTCGGG CTGGGGCTGC TGACCGCCAG CTTGGGGGAG TAGCCGAGTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105814|E3,PHD|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001810--F-box_dom
IPR003347--JmjC_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp
IPR019786--Zinc_finger_PHD-type_CS
IPR002857--Znf_CXXC
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51184--JMJC
PS51058--ZF_CXXC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF00646--F-box
PF02373--JmjC
PF16866--PHD_4
PF02008--zf-CXXC
SMART

SM00558--JmjC
SM00367--LRR_CC
SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006303--P:double-strand break repair via nonhomologous end joining
GO:0070544--P:histone H3-K36 demethylation
KEGG rno:361700
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002052 Ailuropoda melanoleuca 87.18 0.00e+00 1127.00
IUUC-Apl-003192 Anas platyrhynchos 78.39 0.00e+00 1051.00
IUUC-Aca-004576 Anolis carolinensis 83.83 0.00e+00 1892.00
IUUC-Ago-007912 Ashbya gossypii 37.24 4.00e-52 199.00
IUUC-Ame-011753 Astyanax mexicanus 51.96 0.00e+00 676.00
IUUC-Bta-012730 Bos taurus 85.28 0.00e+00 1831.00
IUUC-Bra-016717 Brassica rapa 23.77 3.00e-09 55.50
IUUC-Cel-018303 Caenorhabditis elegans 38.25 2.00e-79 290.00
IUUC-Cja-019030 Callithrix jacchus 97.42 0.00e+00 2108.00
IUUC-Cfa-020644 Canis familiaris 97.42 0.00e+00 2137.00
IUUC-Cpo-022055 Cavia porcellus 97.24 0.00e+00 2102.00
IUUC-Csa-023379 Chlorocebus sabaeus 97.29 0.00e+00 2076.00
IUUC-Cho-024541 Choloepus hoffmanni 75.48 0.00e+00 1403.00
IUUC-Cin-025140 Ciona intestinalis 61.09 3.00e-107 382.00
IUUC-Csv-025861 Ciona savignyi 58.59 8.00e-121 427.00
IUUC-Cne-026797 Cryptococcus neoformans 38.51 6.00e-59 222.00
IUUC-Dre-027763 Danio rerio 61.00 0.00e+00 833.00
IUUC-Dno-029268 Dasypus novemcinctus 96.47 0.00e+00 2084.00
IUUC-Dor-031142 Dipodomys ordii 96.37 0.00e+00 1008.00
IUUC-Dme-032039 Drosophila melanogaster 60.65 6.00e-125 442.00
IUUC-Ete-032467 Echinops telfairi 86.96 0.00e+00 1863.00
IUUC-Eca-033526 Equus caballus 96.82 0.00e+00 2103.00
IUUC-Eeu-035273 Erinaceus europaeus 83.06 0.00e+00 1409.00
IUUC-Fca-035532 Felis catus 97.21 0.00e+00 2072.00
IUUC-Fal-037140 Ficedula albicollis 87.04 0.00e+00 1921.00
IUUC-Gmo-038932 Gadus morhua 58.83 0.00e+00 792.00
IUUC-Gga-040418 Gallus gallus 83.41 0.00e+00 1092.00
IUUC-Gac-041674 Gasterosteus aculeatus 55.44 0.00e+00 1196.00
IUUC-Ggo-045330 Gorilla gorilla 92.95 0.00e+00 790.00
IUUC-Hsa-046180 Homo sapiens 97.25 0.00e+00 2125.00
IUUC-Itr-048198 Ictidomys tridecemlineatus 96.43 0.00e+00 1397.00
IUUC-Lch-049730 Latimeria chalumnae 59.25 0.00e+00 969.00
IUUC-Loc-051972 Lepisosteus oculatus 59.06 0.00e+00 775.00
IUUC-Laf-053939 Loxodonta africana 96.43 0.00e+00 2086.00
IUUC-Mcc-054600 Macaca mulatta 97.16 0.00e+00 2104.00
IUUC-Meu-056314 Macropus eugenii 90.97 0.00e+00 1184.00
IUUC-Mga-059549 Meleagris gallopavo 78.70 0.00e+00 1125.00
IUUC-Mmr-060865 Microcebus murinus 97.50 0.00e+00 2125.00
IUUC-Mdo-062567 Monodelphis domestica 94.06 0.00e+00 2060.00
IUUC-Mmu-063782 Mus musculus 99.05 0.00e+00 2170.00
IUUC-Mpu-066055 Mustela putorius furo 97.07 0.00e+00 2134.00
IUUC-Mlu-067228 Myotis lucifugus 89.24 0.00e+00 1132.00
IUUC-Nle-069668 Nomascus leucogenys 97.33 0.00e+00 2105.00
IUUC-Opr-070225 Ochotona princeps 95.59 0.00e+00 2063.00
IUUC-Ont-071349 Oreochromis niloticus 75.76 1.00e-174 607.00
IUUC-Oan-073668 Ornithorhynchus anatinus 80.50 0.00e+00 668.00
IUUC-Ocu-074710 Oryctolagus cuniculus 97.76 0.00e+00 2084.00
IUUC-Ola-087410 Oryzias latipes 57.96 0.00e+00 770.00
IUUC-Oga-088644 Otolemur garnettii 97.10 0.00e+00 2019.00
IUUC-Oar-089193 Ovis aries 95.83 0.00e+00 2046.00
IUUC-Ptr-091523 Pan troglodytes 97.25 0.00e+00 2125.00
IUUC-Pan-092415 Papio anubis 97.33 0.00e+00 2109.00
IUUC-Psi-093607 Pelodiscus sinensis 88.38 0.00e+00 1040.00
IUUC-Ppa-095609 Physcomitrella patens 37.58 4.00e-58 218.00
IUUC-Pfo-096695 Poecilia formosa 50.13 0.00e+00 1070.00
IUUC-Pab-098580 Pongo abelii 97.46 0.00e+00 1222.00
IUUC-Pca-100670 Procavia capensis 91.92 0.00e+00 1503.00
IUUC-Pva-102416 Pteropus vampyrus 90.52 0.00e+00 1906.00
IUUC-Pgr-103554 Puccinia graminis 44.67 4.00e-74 272.00
IUUC-Sce-106445 Saccharomyces cerevisiae 43.46 5.00e-50 192.00
IUUC-Sha-106693 Sarcophilus harrisii 93.73 0.00e+00 1940.00
IUUC-Spo-108120 Schizosaccharomyces pombe 33.90 2.00e-48 187.00
IUUC-Smo-109024 Selaginella moellendorffii 36.02 1.00e-58 220.00
IUUC-Sar-113568 Sorex araneus 93.55 0.00e+00 2000.00
IUUC-Sre-115112 Sporisorium reilianum 40.94 1.00e-59 224.00
IUUC-Ssc-116337 Sus scrofa 95.53 0.00e+00 1534.00
IUUC-Tgu-117298 Taeniopygia guttata 87.71 0.00e+00 1923.00
IUUC-Tru-118423 Takifugu rubripes 52.36 0.00e+00 1118.00
IUUC-Tsy-119293 Tarsius syrichta 95.59 0.00e+00 2018.00
IUUC-Tni-120020 Tetraodon nigroviridis 55.30 0.00e+00 760.00
IUUC-Tbe-127450 Tupaia belangeri 85.12 0.00e+00 1743.00
IUUC-Ttr-128837 Tursiops truncatus 86.75 0.00e+00 904.00
IUUC-Uma-129458 Ustilago maydis 38.60 3.00e-60 226.00
IUUC-Vpa-130655 Vicugna pacos 90.57 0.00e+00 1453.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved