iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114481

Ensembl Protein ID

Sb03g009130.1

UniProt Accession

C5XFM7; C5XFM7_SORBI

Genbank Protein ID

EES02665.1; KXG32152.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762; CM000762

Gene Name

SORBI_003G108700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g009130	Sb03g009130.1	Sb03g009130.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	33.77	3.00e-04	45.40	IUUC-Hsa-046416

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAPKPIWVR QAEEAKLKSE AETAAAAKAA FEATFKALAA APGDADNDAD PAPPSPAEPA 60
SPESDEDDAP APPGPVDPSK CSAAGPGIAG GSAGTPSTFT VVAKDRHSRR LTAGGARVRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTCCGCCT TCTCTTCCTC GGCACCCCTC ATCTGCTCCG CATCTGCTCC CCCTCCGCCA 60
AACCCTAGCC CGCAAGCAGA GCTTATTGAA GGCAGGCTAG GCGAGAGCAG CGTCCGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017868--Filamin/ABP280_repeat-like
IPR001298--Filamin/ABP280_rpt
IPR013783--Ig-like_fold
IPR014756--Ig_E-set
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR000571--Znf_CCCH

PROSITE

PS50194--FILAMIN_REPEAT
PS50102--RRM
PS50103--ZF_C3H1

Pfam

PF00630--Filamin
PF00076--RRM_1

SMART

SM00557--IG_FLMN
SM00360--RRM
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding
GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding

KEGG

sbi:SORBI_03g009130

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001769	Ailuropoda melanoleuca	33.33	2.00e-08	53.90
IUUC-Aca-004825	Anolis carolinensis	28.87	3.00e-07	49.70
IUUC-Ame-011937	Astyanax mexicanus	35.16	3.00e-08	53.10
IUUC-Bta-013091	Bos taurus	33.33	1.00e-08	54.30
IUUC-Cja-019116	Callithrix jacchus	33.33	1.00e-08	54.30
IUUC-Cfa-020946	Canis familiaris	33.33	2.00e-08	53.90
IUUC-Cpo-021747	Cavia porcellus	33.33	1.00e-08	54.30
IUUC-Csa-023901	Chlorocebus sabaeus	34.41	3.00e-09	56.20
IUUC-Cin-025406	Ciona intestinalis	27.08	2.30e-02	33.50
IUUC-Dno-029414	Dasypus novemcinctus	33.33	9.00e-09	55.10
IUUC-Dor-030216	Dipodomys ordii	34.18	6.00e-06	44.70
IUUC-Ete-032776	Echinops telfairi	33.33	9.00e-09	54.70
IUUC-Eeu-034845	Erinaceus europaeus	33.33	1.00e-08	54.30
IUUC-Fca-035594	Felis catus	33.33	2.00e-08	53.50
IUUC-Gmo-039232	Gadus morhua	33.65	5.00e-06	45.10
IUUC-Gga-040515	Gallus gallus	33.33	8.00e-09	55.10
IUUC-Gac-042506	Gasterosteus aculeatus	32.58	1.00e-07	50.80
IUUC-Gma-044219	Glycine max	64.10	2.00e-102	366.00
IUUC-Ggo-045603	Gorilla gorilla	33.33	1.00e-08	54.30
IUUC-Hsa-046416	Homo sapiens	33.33	1.00e-08	54.30
IUUC-Itr-048448	Ictidomys tridecemlineatus	33.33	1.00e-08	54.30
IUUC-Lch-049464	Latimeria chalumnae	33.65	1.00e-09	57.40
IUUC-Lpe-050809	Leersia perrieri	77.89	7.00e-118	417.00
IUUC-Loc-052772	Lepisosteus oculatus	33.66	3.00e-09	55.80
IUUC-Mcc-055778	Macaca mulatta	33.33	1.00e-08	54.30
IUUC-Meu-056100	Macropus eugenii	32.26	1.00e-08	54.30
IUUC-Mmr-060733	Microcebus murinus	33.33	2.00e-08	53.90
IUUC-Mdo-062705	Monodelphis domestica	32.26	8.00e-09	55.10
IUUC-Mmu-063099	Mus musculus	33.00	4.00e-08	52.40
IUUC-Mac-065515	Musa acuminata	62.85	4.00e-98	352.00
IUUC-Mpu-066757	Mustela putorius furo	33.33	1.00e-08	53.90
IUUC-Mlu-067822	Myotis lucifugus	32.47	6.00e-05	42.00
IUUC-Nle-069595	Nomascus leucogenys	33.33	2.00e-08	53.50
IUUC-Opr-070954	Ochotona princeps	34.00	3.00e-09	55.80
IUUC-Ont-071292	Oreochromis niloticus	38.78	8.00e-08	51.20
IUUC-Ocu-074675	Oryctolagus cuniculus	33.33	1.00e-08	54.30
IUUC-Ogl-077726	Oryza glaberrima	79.72	3.00e-125	442.00
IUUC-Ogu-078410	Oryza glumaepatula	79.72	4.00e-125	441.00
IUUC-Oni-083081	Oryza nivara	79.26	8.00e-124	437.00
IUUC-Oru-084365	Oryza rufipogon	79.26	1.00e-123	436.00
IUUC-Osa-085953	Oryza sativa	79.49	8.00e-125	440.00
IUUC-Ola-086353	Oryzias latipes	35.16	7.00e-09	55.10
IUUC-Oga-089121	Otolemur garnettii	33.33	1.00e-08	54.30
IUUC-Oar-089931	Ovis aries	33.33	2.00e-08	53.90
IUUC-Ptr-090907	Pan troglodytes	33.33	1.00e-08	54.30
IUUC-Pan-092076	Papio anubis	33.33	1.00e-08	54.30
IUUC-Psi-093414	Pelodiscus sinensis	31.00	1.00e-08	53.90
IUUC-Pma-094227	Petromyzon marinus	31.48	2.00e-04	40.00
IUUC-Pfo-096848	Poecilia formosa	35.71	6.00e-10	58.50
IUUC-Pab-097602	Pongo abelii	33.33	9.00e-09	54.70
IUUC-Pca-100183	Procavia capensis	31.43	3.00e-08	52.80
IUUC-Pva-103232	Pteropus vampyrus	33.33	3.00e-08	53.10
IUUC-Rno-105886	Rattus norvegicus	30.88	7.00e-10	58.20
IUUC-Sha-107604	Sarcophilus harrisii	32.26	9.00e-09	54.70
IUUC-Sly-111723	Solanum lycopersicum	63.43	2.00e-86	312.00
IUUC-Stu-112510	Solanum tuberosum	68.18	1.00e-34	138.00
IUUC-Sar-113243	Sorex araneus	33.33	3.00e-09	55.50
IUUC-Ssc-115253	Sus scrofa	33.33	2.00e-08	53.90
IUUC-Tgu-116859	Taeniopygia guttata	34.29	2.00e-10	59.70
IUUC-Tru-118209	Takifugu rubripes	35.24	4.00e-09	55.50
IUUC-Tsy-119487	Tarsius syrichta	33.33	5.00e-08	52.40
IUUC-Tni-120733	Tetraodon nigroviridis	33.71	5.00e-08	52.40
IUUC-Tbe-127438	Tupaia belangeri	28.87	1.00e-07	50.80
IUUC-Ttr-128584	Tursiops truncatus	33.00	1.00e-05	43.90
IUUC-Vvi-131620	Vitis vinifera	70.09	7.00e-27	112.00
IUUC-Xma-134298	Xiphophorus maculatus	36.73	2.00e-10	59.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence