iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	RAID2
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UBQ/UBQ_Other	UBQ_Other	10831842; 25776854

Classification

Family	E-value	Score	Start	End
UBD/Alpha-Helix/UBA	1.00e-07	33.0	622	655
ULD/UDP/UBQ/UBQ_Other	1.80e-17	64.1	23	93

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 6    kleqlveMGF.dreealqaLraannnleaAveyL 38
           +leql++MGF + e++lqaL a+ ++++aAve L
   Q: 622  QLEQLRAMGFlNLEANLQALIATEGDVDAAVEKL 655
           79*****************************988 PP

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekk 73
            vtvk+++++e +++v  ++t+ +LKeki+++++ +p+q  Li++GkiL+d+++La++g++dg t+hl+ k+
   Q: 23   RVTVKTPKDKE-DFSVVDTCTIRQLKEKISHRFKAHPNQLVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKM 93
           68999999986.88899****************************************************876 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MAKSGEALPQ GSLAPAQDSQ LIRVTVKTPK DKEDFSVVDT CTIRQLKEKI SHRFKAHPNQ 60
LVLIFAGKIL KDPDSLAQCG VRDGLTVHLV IKMQRRTIGT ECPSPPVSIP GPNPGEIPQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCTGCAGG GTGGCTATAC AGCAAGATGA GGGCAGTTTG GAGCCCTGCC TAAGAGGAAG 60
GACGGGGCCA CAGCAGATTG GTGTGTATCC CCCTGATTGG GCCCTTTCAC TGCCCTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

KEGG

mmu:244178

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001302	Ailuropoda melanoleuca	73.56	0.00e+00	827.00
IUUC-Bgr-012188	Blumeria graminis	27.71	3.00e-11	62.80
IUUC-Bta-012941	Bos taurus	71.62	0.00e+00	697.00
IUUC-Cja-019387	Callithrix jacchus	72.08	0.00e+00	788.00
IUUC-Cfa-020572	Canis familiaris	74.16	0.00e+00	852.00
IUUC-Cpo-021846	Cavia porcellus	75.56	1.00e-123	437.00
IUUC-Csa-024187	Chlorocebus sabaeus	73.10	0.00e+00	780.00
IUUC-Cho-024936	Choloepus hoffmanni	73.86	0.00e+00	848.00
IUUC-Dno-029226	Dasypus novemcinctus	75.68	0.00e+00	883.00
IUUC-Ete-032824	Echinops telfairi	68.03	0.00e+00	718.00
IUUC-Eca-033383	Equus caballus	69.82	2.00e-180	625.00
IUUC-Fca-035855	Felis catus	74.16	0.00e+00	799.00
IUUC-Ggo-045636	Gorilla gorilla	72.95	0.00e+00	824.00
IUUC-Hsa-046761	Homo sapiens	72.95	0.00e+00	814.00
IUUC-Itr-049069	Ictidomys tridecemlineatus	77.36	0.00e+00	847.00
IUUC-Laf-054412	Loxodonta africana	83.23	1.00e-138	486.00
IUUC-Mcc-055310	Macaca mulatta	73.40	0.00e+00	784.00
IUUC-Mmr-060687	Microcebus murinus	79.91	0.00e+00	851.00
IUUC-Mdo-062941	Monodelphis domestica	74.52	7.00e-118	417.00
IUUC-Mpu-066645	Mustela putorius furo	84.59	7.00e-124	437.00
IUUC-Nle-069745	Nomascus leucogenys	73.56	0.00e+00	806.00
IUUC-Ocu-073979	Oryctolagus cuniculus	75.42	0.00e+00	829.00
IUUC-Oga-088802	Otolemur garnettii	76.75	0.00e+00	843.00
IUUC-Oar-089721	Ovis aries	70.36	0.00e+00	734.00
IUUC-Ptr-091188	Pan troglodytes	65.65	0.00e+00	696.00
IUUC-Pab-098116	Pongo abelii	73.86	0.00e+00	834.00
IUUC-Pca-100194	Procavia capensis	68.50	5.00e-167	580.00
IUUC-Pva-102958	Pteropus vampyrus	75.47	2.00e-180	625.00
IUUC-Pte-104090	Pyrenophora teres	40.28	2.00e-07	50.80
IUUC-Pyt-104472	Pyrenophora triticirepentis	40.28	1.00e-07	51.20
IUUC-Rno-105161	Rattus norvegicus	91.03	0.00e+00	1071.00
IUUC-Sha-107327	Sarcophilus harrisii	57.29	2.00e-177	615.00
IUUC-Sar-113022	Sorex araneus	70.74	0.00e+00	814.00
IUUC-Ssc-115333	Sus scrofa	70.44	5.00e-128	451.00
IUUC-Tsy-119637	Tarsius syrichta	71.58	2.00e-176	612.00
IUUC-Tbe-128150	Tupaia belangeri	73.20	6.00e-174	603.00
IUUC-Ttr-128507	Tursiops truncatus	70.67	0.00e+00	789.00
IUUC-Vpa-130797	Vicugna pacos	63.11	0.00e+00	682.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence