iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014152

UUCD1 version

UUC-BrD-00959

Ensembl Protein ID

BRADI3G57667.1

UniProt Accession

I1IER3; I1IER3_BRADI

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G57667	BRADI3G57667.1	BRADI3G57667.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-06	27.5	57	120
E3 adaptor/Cullin RING/DCX/DWD	6.90e-28	96.1	556	593
UBD/Beta-Prp	2.90e-40	138.8	380	680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
           +lCpI + + +d   +++G+++   +I  +l ++   cP ++  lt+ +l Pn  l +++++  +
   Q: 57   LLCPICMGVIKDAFLTACGHSFCYMCIVTHLGHKSD-CPCCGNYLTKAQLYPNFLLDKVVKKMSA 120
           79****************************999999.****************999888877655 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+  v+ ++f s++ l+s+s D t+++WD++++ +++
   Q: 556  GHKKAVSYVKFlSNNELASASTDSTLRLWDVKENCPVR 593
           8999*******9889****************9887766 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkghe 94
            + ++++ f +d++l+at++ +++ikv++++t           + ++   + + +++++++ +   v +s+D  +++ vwd++t++ v+ +++he
   Q: 380  PNIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNepsdvhcpVVEMATRS-KLSCLSWNKYS-KNVIASSDyeGIVTVWDVQTRQSVMEYEEHE 472
           567899**************************5447777666655554444.599****9998.5677777777********************* PP
   S: 95   dsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktg.kllrtltgghtdsvysl 186
           ++++s++fs++  + lvsGs+d  ++vw ++++     ++   ++ +++v+++p +  +++ Gs+D  +  +dl++  + l+ + g h+++v  +
   Q: 473  KRAWSVDFSRTEpSMLVSGSDDCKVKVWCTKQEASA--INIDMKANICSVKYNPGSsYYVAVGSADHNIHYFDLRNPsTPLHIFGG-HKKAVSYV 564
           **********888***************55555555..67777777********99899999************775167999987.******** PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn..............ssv 267
           +f sn +el+s+s+d+t++lwd++++  vrt++gh++  + v +s  ++++++gs+ + ++++   ++ + k  + h+              + +
   Q: 565  KFLSN-NELASASTDSTLRLWDVKENCPVRTFRGHKNEKNFVGLSVSNDYIACGSETNEVFVY---HKAISKPASSHRfvssdvddadddpgTYF 655
           ****8.7*******************99**********************************9...77777777777788899999*****9999 PP
   S: 268  isvavlsfgdnvlvlgsedskvniw 292
           is  +++ + + ++++ + ++++++
   Q: 656  ISAVCWKSDSPTMLTANSQGTIKVL 680
           99999****************9997 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGDSSVPGAL VPTVPKPEPA RSGDGSAAAQ AVVEEEEEQA LADGEAAAAA GAPDGDLLCP 60
ICMGVIKDAF LTACGHSFCY MCIVTHLGHK SDCPCCGNYL TKAQLYPNFL LDKVVKKMSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGACT CATCGGTGCC GGGCGCGCTG GTGCCGACGG TGCCGAAGCC GGAGCCGGCG 60
CGGTCTGGGG ACGGGTCCGC CGCCGCGCAA GCCGTGGTGG CGCGGCAGCA GGCGGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0046283--P:anthocyanin-containing compound metabolic process
GO:0006281--P:DNA repair
GO:0009649--P:entrainment of circadian clock
GO:0009640--P:photomorphogenesis
GO:0048573--P:photoperiodism, flowering
GO:0010119--P:regulation of stomatal movement
GO:0009641--P:shade avoidance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	90.54	0.00e+00	1177.00
IUUC-Aml-001265	Ailuropoda melanoleuca	38.91	2.00e-122	432.00
IUUC-Atr-002460	Amborella trichopoda	75.32	0.00e+00	949.00
IUUC-Apl-003796	Anas platyrhynchos	38.42	2.00e-116	412.00
IUUC-Aca-005078	Anolis carolinensis	39.07	8.00e-121	427.00
IUUC-Aly-006014	Arabidopsis lyrata	71.82	0.00e+00	947.00
IUUC-Ath-007636	Arabidopsis thaliana	72.13	0.00e+00	950.00
IUUC-Ame-011176	Astyanax mexicanus	53.72	8.00e-38	150.00
IUUC-Bta-012595	Bos taurus	39.04	4.00e-123	434.00
IUUC-Bol-016380	Brassica oleracea	71.34	0.00e+00	937.00
IUUC-Bra-017690	Brassica rapa	70.27	0.00e+00	912.00
IUUC-Cja-018926	Callithrix jacchus	38.83	3.00e-122	431.00
IUUC-Cfa-021088	Canis familiaris	38.83	6.00e-123	434.00
IUUC-Cpo-022442	Cavia porcellus	38.12	2.00e-116	412.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	30.88	6.00e-36	143.00
IUUC-Csa-024119	Chlorocebus sabaeus	38.89	2.00e-122	432.00
IUUC-Cin-025375	Ciona intestinalis	45.74	7.00e-97	347.00
IUUC-Cme-027350	Cyanidioschyzon merolae	43.80	3.00e-89	322.00
IUUC-Dre-028453	Danio rerio	38.45	2.00e-119	422.00
IUUC-Dno-029887	Dasypus novemcinctus	38.67	1.00e-122	433.00
IUUC-Dor-031110	Dipodomys ordii	51.80	6.00e-91	327.00
IUUC-Ete-033016	Echinops telfairi	51.80	8.00e-91	327.00
IUUC-Eca-034403	Equus caballus	38.59	5.00e-116	410.00
IUUC-Eeu-034690	Erinaceus europaeus	51.96	2.00e-85	309.00
IUUC-Fca-036475	Felis catus	38.72	8.00e-117	413.00
IUUC-Fal-037189	Ficedula albicollis	38.95	8.00e-123	433.00
IUUC-Gmo-039245	Gadus morhua	46.31	3.00e-102	365.00
IUUC-Gga-040806	Gallus gallus	39.11	4.00e-123	434.00
IUUC-Gac-042177	Gasterosteus aculeatus	38.43	3.00e-115	408.00
IUUC-Gma-044187	Glycine max	71.56	0.00e+00	912.00
IUUC-Ggo-044430	Gorilla gorilla	35.14	9.00e-78	283.00
IUUC-Hsa-045853	Homo sapiens	38.67	6.00e-123	434.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	53.30	2.00e-71	261.00
IUUC-Lch-050420	Latimeria chalumnae	40.16	9.00e-122	430.00
IUUC-Lpe-051219	Leersia perrieri	86.72	0.00e+00	1191.00
IUUC-Loc-052728	Lepisosteus oculatus	39.07	1.00e-114	406.00
IUUC-Laf-053775	Loxodonta africana	38.76	9.00e-123	433.00
IUUC-Meu-056595	Macropus eugenii	39.01	2.00e-57	216.00
IUUC-Mtr-058555	Medicago truncatula	69.21	0.00e+00	946.00
IUUC-Mga-059646	Meleagris gallopavo	38.72	1.00e-116	412.00
IUUC-Mmr-060990	Microcebus murinus	38.91	3.00e-122	431.00
IUUC-Mdo-062287	Monodelphis domestica	38.98	7.00e-123	433.00
IUUC-Mmu-064097	Mus musculus	38.83	7.00e-123	434.00
IUUC-Mac-065240	Musa acuminata	74.71	0.00e+00	1014.00
IUUC-Mpu-066612	Mustela putorius furo	38.59	7.00e-117	413.00
IUUC-Mlu-067967	Myotis lucifugus	38.30	7.00e-115	407.00
IUUC-Nle-069543	Nomascus leucogenys	38.98	7.00e-123	434.00
IUUC-Opr-070366	Ochotona princeps	45.32	7.00e-47	181.00
IUUC-Ont-071522	Oreochromis niloticus	37.36	3.00e-114	405.00
IUUC-Oan-073409	Ornithorhynchus anatinus	38.52	3.00e-115	408.00
IUUC-Ocu-073756	Oryctolagus cuniculus	38.72	7.00e-118	417.00
IUUC-Oba-075149	Oryza barthii	87.99	0.00e+00	1214.00
IUUC-Obr-076563	Oryza brachyantha	91.08	0.00e+00	1194.00
IUUC-Ogl-077701	Oryza glaberrima	88.32	0.00e+00	1219.00
IUUC-Ogu-078383	Oryza glumaepatula	88.32	0.00e+00	1219.00
IUUC-Oin-079965	Oryza indica	85.85	0.00e+00	1110.00
IUUC-Olo-080639	Oryza longistaminata	88.58	0.00e+00	1182.00
IUUC-Ome-081821	Oryza meridionalis	91.11	0.00e+00	1127.00
IUUC-Oni-082622	Oryza nivara	88.32	0.00e+00	1219.00
IUUC-Opu-083295	Oryza punctata	87.63	0.00e+00	1219.00
IUUC-Oru-084661	Oryza rufipogon	88.32	0.00e+00	1219.00
IUUC-Osa-085766	Oryza sativa	88.32	0.00e+00	1219.00
IUUC-Ola-086727	Oryzias latipes	39.26	2.00e-121	429.00
IUUC-Oga-088215	Otolemur garnettii	38.56	7.00e-118	417.00
IUUC-Oar-089880	Ovis aries	38.56	4.00e-118	417.00
IUUC-Ptr-090597	Pan troglodytes	38.67	6.00e-123	434.00
IUUC-Pan-091987	Papio anubis	38.98	4.00e-123	434.00
IUUC-Psi-094033	Pelodiscus sinensis	39.25	1.00e-118	419.00
IUUC-Pma-094587	Petromyzon marinus	38.14	3.00e-110	391.00
IUUC-Ppa-095401	Physcomitrella patens	63.50	0.00e+00	798.00
IUUC-Pfo-097388	Poecilia formosa	47.18	1.00e-102	366.00
IUUC-Pab-098029	Pongo abelii	38.98	6.00e-123	434.00
IUUC-Pop-099319	Populus trichocarpa	70.86	0.00e+00	925.00
IUUC-Pca-100846	Procavia capensis	46.78	4.00e-104	371.00
IUUC-Ppe-101250	Prunus persica	63.37	0.00e+00	834.00
IUUC-Pva-102407	Pteropus vampyrus	38.83	9.00e-120	423.00
IUUC-Rno-105312	Rattus norvegicus	38.83	2.00e-122	432.00
IUUC-Sha-106514	Sarcophilus harrisii	47.18	2.00e-99	355.00
IUUC-Smo-109418	Selaginella moellendorffii	60.60	0.00e+00	771.00
IUUC-Sit-110248	Setaria italica	84.94	0.00e+00	1185.00
IUUC-Sly-110895	Solanum lycopersicum	73.57	0.00e+00	962.00
IUUC-Stu-112386	Solanum tuberosum	70.06	0.00e+00	903.00
IUUC-Sar-113230	Sorex araneus	43.00	1.00e-67	249.00
IUUC-Sbi-113962	Sorghum bicolor	82.62	0.00e+00	1162.00
IUUC-Ssc-115987	Sus scrofa	27.11	3.00e-24	105.00
IUUC-Tgu-116471	Taeniopygia guttata	38.60	1.00e-121	429.00
IUUC-Tru-118231	Takifugu rubripes	48.46	3.00e-104	371.00
IUUC-Tsy-119415	Tarsius syrichta	38.28	3.00e-115	408.00
IUUC-Tni-120893	Tetraodon nigroviridis	48.46	3.00e-104	372.00
IUUC-Tca-121619	Theobroma cacao	71.70	0.00e+00	943.00
IUUC-Tae-125440	Triticum aestivum	87.34	0.00e+00	1215.00
IUUC-Tur-126557	Triticum urartu	91.51	0.00e+00	1177.00
IUUC-Ttr-129100	Tursiops truncatus	39.04	8.00e-116	410.00
IUUC-Vpa-130613	Vicugna pacos	35.60	4.00e-101	361.00
IUUC-Vvi-130880	Vitis vinifera	76.49	0.00e+00	953.00
IUUC-Xtr-132033	Xenopus tropicalis	39.75	2.00e-128	452.00
IUUC-Xma-133421	Xiphophorus maculatus	47.18	1.00e-102	366.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence