iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111609

Ensembl Protein ID

Solyc04g007120.2.1

UniProt Accession

K4BNL9; K4BNL9_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g007120.2	Solyc04g007120.2.1	Solyc04g007120.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-22	79.7	180	218
ULD/UDP/UBQ/UBQ_PIM	1.20e-25	90.0	1	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 6    kleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +++q+ +MG   +dre++++aLraa+nn+e+AveyL++g
   Q: 180  AIQQILDMGggtWDRETVVRALRAAFNNPERAVEYLYSG 218
           89**********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksks 76
           mk++vktlkg++fe+ev+++dtv+++K++i++++g   +p++qq LI++Gk+LkD ttL+e+++ + ++++++++ksks
   Q: 1    MKIFVKTLKGSHFEIEVKPEDTVADVKKNIETVQGsdvYPAAQQMLIHQGKVLKDGTTLEENKVAESNFIVIMLTKSKS 79
           99**************************************************************************986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKIFVKTLKG SHFEIEVKPE DTVADVKKNI ETVQGSDVYP AAQQMLIHQG KVLKDGTTLE 60
ENKVAESNFI VIMLTKSKSS AGEGSATSTA ATAKTPQSST AAPSSTPAST AAQVPVASPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGCGTGTC TTACACGCAC ATATCATACG CGTGAAAGTG TCTCCTCAGT TATTAAATAT 60
ATAAAAAGGC CTGTACTCTT TTAACTCTTT ACTTGCACCT TACGGTCCTT TCTACATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101249452

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005498	Arabidopsis lyrata	79.68	2.00e-103	368.00
IUUC-Ath-006676	Arabidopsis thaliana	75.98	4.00e-100	357.00
IUUC-Dse-031336	Dothistroma septosporum	36.88	7.00e-27	114.00
IUUC-Fca-035679	Felis catus	37.50	7.00e-33	134.00
IUUC-Gma-043743	Glycine max	78.97	6.00e-111	393.00
IUUC-Opr-070234	Ochotona princeps	48.21	2.00e-10	58.90
IUUC-Pfo-097385	Poecilia formosa	38.80	1.00e-38	153.00
IUUC-Pte-104303	Pyrenophora teres	50.39	3.00e-23	102.00
IUUC-Sit-110235	Setaria italica	65.86	2.00e-82	298.00
IUUC-Sbi-114835	Sorghum bicolor	77.17	5.00e-54	204.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence