iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/GAT	49.28	7.00e-88	322.00	IUUC-Mmu-063746
UBD/Alpha-Helix/VHS	49.28	7.00e-88	322.00	IUUC-Mmu-063746

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSNVSEQVSK AAESARETVA KVGESVSDFF QGNPFATPVG RKIELATDAN LLATENWGLN 60
MEICDFINGT EDGPRDAVRA LKKRLHNAMS KNNAVVMYTL TVLETAVKNC NHHFHVLVCN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATCTTGAT TTTATTTCAG AATGAGCAAC GTTAGTGAGC AAGTTTCGAA GGCTGCGGAA 60
AGCGCACGCG AGACTGTTGC CAAAGTTGGA GAATCTGTGT CCGATTTCTT CCAGGGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR014645--TOM1
IPR027429--TOM1L2
IPR002014--VHS_dom

PROSITE

PS50909--GAT
PS50179--VHS

Pfam

PF03127--GAT
PF00790--VHS

SMART

SM00288--VHS

Gene Ontology

GO:0005622--C:intracellular
GO:0006886--P:intracellular protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000135	Aegilops tauschii	27.92	2.00e-20	92.80
IUUC-Aml-002171	Ailuropoda melanoleuca	48.67	9.00e-79	286.00
IUUC-Atr-003138	Amborella trichopoda	28.85	3.00e-21	95.50
IUUC-Apl-003931	Anas platyrhynchos	48.64	3.00e-76	277.00
IUUC-Aca-004547	Anolis carolinensis	51.61	2.00e-80	291.00
IUUC-Aly-005656	Arabidopsis lyrata	27.52	1.00e-23	103.00
IUUC-Ath-007359	Arabidopsis thaliana	27.19	3.00e-23	102.00
IUUC-Ame-011059	Astyanax mexicanus	47.97	8.00e-83	299.00
IUUC-Bta-013410	Bos taurus	46.91	3.00e-86	311.00
IUUC-Bdi-015001	Brachypodium distachyon	28.92	3.00e-24	105.00
IUUC-Bol-015832	Brassica oleracea	25.70	3.00e-23	102.00
IUUC-Bra-017805	Brassica rapa	25.70	3.00e-23	102.00
IUUC-Cja-019153	Callithrix jacchus	49.07	5.00e-75	273.00
IUUC-Cfa-020935	Canis familiaris	49.27	7.00e-82	296.00
IUUC-Cpo-021418	Cavia porcellus	49.70	2.00e-87	314.00
IUUC-Cre-022771	Chlamydomonas reinhardtii	30.81	1.00e-13	68.60
IUUC-Csa-023899	Chlorocebus sabaeus	50.00	2.00e-83	301.00
IUUC-Cho-025095	Choloepus hoffmanni	27.76	2.00e-27	115.00
IUUC-Cin-025779	Ciona intestinalis	36.23	2.00e-48	184.00
IUUC-Dre-027648	Danio rerio	48.38	3.00e-84	304.00
IUUC-Dno-029588	Dasypus novemcinctus	51.75	3.00e-80	291.00
IUUC-Dor-030925	Dipodomys ordii	39.61	3.00e-63	234.00
IUUC-Dme-032144	Drosophila melanogaster	49.06	1.00e-84	305.00
IUUC-Ete-032525	Echinops telfairi	31.60	2.00e-45	175.00
IUUC-Eca-034207	Equus caballus	48.03	4.00e-87	314.00
IUUC-Eeu-035025	Erinaceus europaeus	47.01	1.00e-57	216.00
IUUC-Fca-036096	Felis catus	50.29	3.00e-84	304.00
IUUC-Fal-036951	Ficedula albicollis	49.71	2.00e-84	304.00
IUUC-Gmo-039675	Gadus morhua	48.75	3.00e-81	294.00
IUUC-Gga-040378	Gallus gallus	49.71	2.00e-84	305.00
IUUC-Gac-042242	Gasterosteus aculeatus	49.85	3.00e-85	308.00
IUUC-Gma-042859	Glycine max	36.49	3.00e-22	98.60
IUUC-Ggo-045180	Gorilla gorilla	50.29	6.00e-84	303.00
IUUC-Hsa-045697	Homo sapiens	50.29	6.00e-84	303.00
IUUC-Hvu-047560	Hordeum vulgare	27.90	2.00e-24	105.00
IUUC-Itr-049028	Ictidomys tridecemlineatus	49.40	2.00e-85	308.00
IUUC-Lch-049647	Latimeria chalumnae	50.30	6.00e-80	290.00
IUUC-Lpe-051031	Leersia perrieri	26.58	3.00e-26	112.00
IUUC-Loc-052081	Lepisosteus oculatus	48.83	8.00e-86	309.00
IUUC-Laf-054231	Loxodonta africana	47.97	6.00e-82	296.00
IUUC-Mcc-055637	Macaca mulatta	50.29	5.00e-84	303.00
IUUC-Meu-056014	Macropus eugenii	41.00	5.00e-58	217.00
IUUC-Mtr-058035	Medicago truncatula	25.31	2.00e-22	99.80
IUUC-Mla-059162	Melampsora laricipopulina	31.61	1.00e-17	84.00
IUUC-Mga-059199	Meleagris gallopavo	47.52	2.00e-68	251.00
IUUC-Mvi-060415	Microbotryum violaceum	26.50	1.00e-10	59.70
IUUC-Mmr-060929	Microcebus murinus	43.33	5.00e-84	303.00
IUUC-Mdo-061814	Monodelphis domestica	46.03	2.00e-82	298.00
IUUC-Mmu-063746	Mus musculus	49.28	6.00e-90	323.00
IUUC-Mac-064432	Musa acuminata	28.71	1.00e-22	100.00
IUUC-Mpu-066772	Mustela putorius furo	46.11	1.00e-86	312.00
IUUC-Mlu-067475	Myotis lucifugus	46.42	5.00e-79	286.00
IUUC-Nle-068998	Nomascus leucogenys	46.56	4.00e-83	300.00
IUUC-Opr-070780	Ochotona princeps	50.49	2.00e-75	274.00
IUUC-Ont-072357	Oreochromis niloticus	49.12	1.00e-82	299.00
IUUC-Oan-073103	Ornithorhynchus anatinus	47.52	1.00e-73	269.00
IUUC-Ocu-073922	Oryctolagus cuniculus	49.38	5.00e-84	303.00
IUUC-Oba-075564	Oryza barthii	28.12	3.00e-25	108.00
IUUC-Obr-076278	Oryza brachyantha	28.72	7.00e-27	114.00
IUUC-Ogl-077758	Oryza glaberrima	28.12	3.00e-25	108.00
IUUC-Ogu-078839	Oryza glumaepatula	28.12	2.00e-25	109.00
IUUC-Oin-079919	Oryza indica	28.12	3.00e-25	108.00
IUUC-Olo-080861	Oryza longistaminata	28.22	6.00e-25	107.00
IUUC-Ome-081795	Oryza meridionalis	28.24	8.00e-25	107.00
IUUC-Oni-082876	Oryza nivara	28.47	2.00e-25	109.00
IUUC-Opu-083866	Oryza punctata	27.91	2.00e-27	115.00
IUUC-Oru-084640	Oryza rufipogon	28.14	3.00e-25	108.00
IUUC-Osa-085855	Oryza sativa	28.12	3.00e-25	108.00
IUUC-Ola-087289	Oryzias latipes	51.49	2.00e-87	314.00
IUUC-Olu-087840	Ostreococcus lucimarinus	28.26	4.00e-12	65.10
IUUC-Oga-088302	Otolemur garnettii	50.00	7.00e-84	303.00
IUUC-Oar-090246	Ovis aries	46.48	3.00e-77	281.00
IUUC-Ptr-091081	Pan troglodytes	50.29	4.00e-84	303.00
IUUC-Pan-092566	Papio anubis	50.29	5.00e-84	303.00
IUUC-Psi-093744	Pelodiscus sinensis	49.12	3.00e-83	301.00
IUUC-Pma-094514	Petromyzon marinus	44.75	6.00e-71	259.00
IUUC-Ppa-095533	Physcomitrella patens	36.13	3.00e-17	82.40
IUUC-Pfo-096489	Poecilia formosa	49.41	1.00e-82	299.00
IUUC-Pab-098769	Pongo abelii	49.69	4.00e-76	277.00
IUUC-Pop-099895	Populus trichocarpa	34.17	5.00e-17	81.60
IUUC-Pca-100907	Procavia capensis	47.54	1.00e-78	285.00
IUUC-Ppe-101305	Prunus persica	26.17	4.00e-23	102.00
IUUC-Pva-102610	Pteropus vampyrus	47.54	1.00e-84	305.00
IUUC-Pgr-103679	Puccinia graminis	31.39	2.00e-15	76.30
IUUC-Ptt-103709	Puccinia triticina	31.62	2.00e-15	75.90
IUUC-Rno-105379	Rattus norvegicus	44.10	4.00e-83	300.00
IUUC-Sce-106195	Saccharomyces cerevisiae	30.54	2.00e-14	72.40
IUUC-Sha-107255	Sarcophilus harrisii	48.44	1.00e-70	259.00
IUUC-Smo-109609	Selaginella moellendorffii	27.19	3.00e-19	87.80
IUUC-Sit-110727	Setaria italica	28.35	4.00e-26	111.00
IUUC-Sly-111006	Solanum lycopersicum	28.96	2.00e-26	112.00
IUUC-Stu-112728	Solanum tuberosum	32.19	2.00e-12	65.50
IUUC-Sar-113062	Sorex araneus	31.36	8.00e-31	126.00
IUUC-Sbi-114813	Sorghum bicolor	28.53	3.00e-26	111.00
IUUC-Sre-115010	Sporisorium reilianum	31.08	2.00e-15	75.90
IUUC-Ssc-116377	Sus scrofa	35.39	2.00e-48	184.00
IUUC-Tgu-116705	Taeniopygia guttata	49.38	2.00e-77	281.00
IUUC-Tru-117717	Takifugu rubripes	50.61	3.00e-86	310.00
IUUC-Tsy-119063	Tarsius syrichta	37.78	2.00e-51	195.00
IUUC-Tni-120701	Tetraodon nigroviridis	43.87	6.00e-71	260.00
IUUC-Tca-121260	Theobroma cacao	33.08	9.00e-19	87.00
IUUC-Tae-123748	Triticum aestivum	28.42	3.00e-24	105.00
IUUC-Tur-126378	Triticum urartu	24.84	3.00e-21	95.90
IUUC-Tbe-128123	Tupaia belangeri	45.83	1.00e-43	168.00
IUUC-Ttr-128710	Tursiops truncatus	48.09	5.00e-65	240.00
IUUC-Uma-129613	Ustilago maydis	29.73	7.00e-15	74.30
IUUC-Vpa-130520	Vicugna pacos	43.51	1.00e-29	122.00
IUUC-Vvi-131199	Vitis vinifera	27.76	5.00e-23	101.00
IUUC-Xtr-132682	Xenopus tropicalis	49.12	3.00e-85	307.00
IUUC-Xma-134041	Xiphophorus maculatus	49.70	4.00e-82	297.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence