iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000929

Ensembl Protein ID

EMT15673

UniProt Accession

R7W5V5; R7W5V5_AEGTA

Genbank Protein ID

EMT15673.1

Protein Name

RING finger and WD repeat domain-containing protein 3

Genbank Nucleotide ID

KD540004

Gene Name

F775_09765

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_09765	EMT15673	EMT15673

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-06	27.7	66	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 20   vlpsGitydrssIekwlasggk...tcPvtrqplteedlvPn 58
           ++p+G++y rs++e+wl + g+   tcP ++++++++d++  
   Q: 66   CIPCGHVYGRSCLERWLTQRGNasaTCPQCGRRFKHKDIINI 107
           689**************66666699*************9876 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MPPRPRGQAG DSSGADPGGR GPRISRSATA KGRTGKMGED RSSSSSSSGE EPEEGTDVED 60
GEGSDCIPCG HVYGRSCLER WLTQRGNASA TCPQCGRRFK HKDIINIYAP EVAVPNNDLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCCGC GCCCCCGGGG CCAGGCGGGC GACTCCTCCG GTGCTGATCC TGGAGGACGA 60
GGACCTCGGA TTTCGAGGTC AGCTACAGCG AAGGGGAGGA CGGGGAAGAT GGGGGAGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_09765

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001188	Ailuropoda melanoleuca	25.85	3.00e-16	79.70
IUUC-Aca-004619	Anolis carolinensis	25.63	8.00e-19	88.20
IUUC-Aly-006391	Arabidopsis lyrata	35.15	2.00e-69	256.00
IUUC-Ath-007300	Arabidopsis thaliana	34.87	5.00e-70	258.00
IUUC-Ame-010890	Astyanax mexicanus	25.05	2.00e-25	110.00
IUUC-Bta-013051	Bos taurus	23.82	5.00e-16	79.30
IUUC-Bdi-014519	Brachypodium distachyon	70.00	0.00e+00	664.00
IUUC-Cja-019240	Callithrix jacchus	24.41	1.00e-13	71.20
IUUC-Cfa-021010	Canis familiaris	23.82	9.00e-18	85.10
IUUC-Cpo-022308	Cavia porcellus	26.71	7.00e-15	75.10
IUUC-Csa-023501	Chlorocebus sabaeus	23.03	5.00e-16	79.30
IUUC-Cin-025403	Ciona intestinalis	26.11	9.00e-17	81.60
IUUC-Cme-027123	Cyanidioschyzon merolae	25.39	1.00e-11	64.30
IUUC-Dre-028354	Danio rerio	27.02	1.00e-21	97.40
IUUC-Dno-029400	Dasypus novemcinctus	24.19	7.00e-16	78.60
IUUC-Eca-034320	Equus caballus	23.42	1.00e-16	81.30
IUUC-Fca-035732	Felis catus	25.25	1.00e-19	90.90
IUUC-Fal-036648	Ficedula albicollis	25.36	9.00e-14	71.60
IUUC-Gmo-038609	Gadus morhua	26.57	6.00e-11	61.20
IUUC-Gac-042318	Gasterosteus aculeatus	26.55	1.00e-12	66.60
IUUC-Gma-043184	Glycine max	35.14	2.00e-66	246.00
IUUC-Ggo-044464	Gorilla gorilla	23.17	5.00e-15	75.90
IUUC-Hsa-045991	Homo sapiens	23.22	2.00e-15	77.00
IUUC-Hvu-047709	Hordeum vulgare	88.80	0.00e+00	847.00
IUUC-Itr-047977	Ictidomys tridecemlineatus	27.18	1.00e-16	80.90
IUUC-Lch-050112	Latimeria chalumnae	25.40	7.00e-18	85.10
IUUC-Lpe-051605	Leersia perrieri	62.09	3.00e-145	508.00
IUUC-Loc-052241	Lepisosteus oculatus	23.74	2.00e-18	87.40
IUUC-Laf-054559	Loxodonta africana	26.64	1.00e-15	77.40
IUUC-Mcc-055093	Macaca mulatta	23.03	7.00e-16	78.60
IUUC-Mtr-058533	Medicago truncatula	37.04	3.00e-79	288.00
IUUC-Mga-059498	Meleagris gallopavo	23.42	1.00e-15	77.80
IUUC-Mvi-060500	Microbotryum violaceum	40.48	1.00e-05	44.30
IUUC-Mmr-061782	Microcebus murinus	23.17	1.00e-16	81.30
IUUC-Mdo-062053	Monodelphis domestica	24.54	2.00e-15	77.40
IUUC-Mmu-063352	Mus musculus	22.60	5.00e-17	82.40
IUUC-Mpu-066087	Mustela putorius furo	23.91	3.00e-17	83.20
IUUC-Mlu-068147	Myotis lucifugus	23.09	9.00e-17	81.60
IUUC-Nle-069503	Nomascus leucogenys	23.09	1.00e-13	71.20
IUUC-Ont-071700	Oreochromis niloticus	25.10	5.00e-20	92.00
IUUC-Oan-073702	Ornithorhynchus anatinus	24.03	2.00e-17	83.60
IUUC-Ocu-074886	Oryctolagus cuniculus	25.16	8.00e-18	85.10
IUUC-Oba-075733	Oryza barthii	64.75	6.00e-176	610.00
IUUC-Obr-076562	Oryza brachyantha	59.80	2.00e-161	561.00
IUUC-Ogl-077651	Oryza glaberrima	61.27	2.00e-162	564.00
IUUC-Ogu-078050	Oryza glumaepatula	61.07	3.00e-162	564.00
IUUC-Oin-079250	Oryza indica	61.27	1.00e-162	565.00
IUUC-Olo-080867	Oryza longistaminata	61.21	3.00e-158	550.00
IUUC-Ome-081707	Oryza meridionalis	60.86	1.00e-161	561.00
IUUC-Oni-082358	Oryza nivara	63.56	4.00e-171	593.00
IUUC-Oru-085173	Oryza rufipogon	63.56	2.00e-171	594.00
IUUC-Oga-088243	Otolemur garnettii	24.41	5.00e-17	82.40
IUUC-Oar-089461	Ovis aries	23.32	2.00e-15	77.00
IUUC-Ptr-090527	Pan troglodytes	22.88	4.00e-13	69.30
IUUC-Pan-092431	Papio anubis	23.97	2.00e-15	77.00
IUUC-Psi-093156	Pelodiscus sinensis	26.51	3.00e-16	79.70
IUUC-Pfo-097065	Poecilia formosa	25.15	2.00e-21	96.70
IUUC-Pab-098272	Pongo abelii	22.88	3.00e-14	73.20
IUUC-Pva-103133	Pteropus vampyrus	24.31	7.00e-09	55.50
IUUC-Sha-107628	Sarcophilus harrisii	24.86	5.00e-15	75.50
IUUC-Sit-109891	Setaria italica	62.91	8.00e-179	619.00
IUUC-Sly-111779	Solanum lycopersicum	35.73	8.00e-69	254.00
IUUC-Sbi-114107	Sorghum bicolor	58.45	4.00e-163	567.00
IUUC-Ssc-115850	Sus scrofa	22.75	1.00e-15	77.80
IUUC-Tgu-117295	Taeniopygia guttata	25.05	2.00e-17	82.80
IUUC-Tru-117539	Takifugu rubripes	24.61	2.00e-23	103.00
IUUC-Tsy-118805	Tarsius syrichta	43.18	1.00e-04	41.60
IUUC-Tni-120274	Tetraodon nigroviridis	26.48	3.00e-25	109.00
IUUC-Tca-121162	Theobroma cacao	36.69	4.00e-74	271.00
IUUC-Tae-125837	Triticum aestivum	94.89	0.00e+00	917.00
IUUC-Tur-126768	Triticum urartu	97.58	2.00e-143	501.00
IUUC-Vpa-130385	Vicugna pacos	24.02	2.00e-17	83.60
IUUC-Xtr-132015	Xenopus tropicalis	23.08	1.00e-17	84.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence