iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116476

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01007226

Gene Name

TRIM13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000012115.1	ENSTGUT00000012616.1	ENSTGUP00000012477.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-08	33.6	10	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iC++ f+d p+vlpC H f+++Cl+ +    +         f+CP+Cr
   Q: 10   CPICCSLFDD-PRVLPCSHNFCRKCLEGIlegnVRNVLWRPSPFKCPTCR 58
           ********99.**************96665555455555889999****8 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MELLEEDLTC PICCSLFDDP RVLPCSHNFC RKCLEGILEG NVRNVLWRPS PFKCPTCRKE 60
TPVTGINSLQ VNYSLKGIVE KYNKIKVTPK MPVCKVHSGQ PLNIFCRTDM QLICGVCATR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCTCC TAGAGGAAGA TCTGACCTGT CCCATTTGCT GTAGCCTGTT TGATGATCCT 60
CGTGTCCTGC CCTGTTCACA CAATTTCTGC AGAAAGTGTC TGGAAGGAAT TCTCGAGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0097038--C:perinuclear endoplasmic reticulum
GO:0004871--F:signal transducer activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:1902187--P:negative regulation of viral release from host cell
GO:0032897--P:negative regulation of viral transcription
GO:0010942--P:positive regulation of cell death
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0016239--P:positive regulation of macroautophagy
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0051865--P:protein autoubiquitination
GO:0010332--P:response to gamma radiation
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	76.23	5.00e-176	610.00
IUUC-Apl-004168	Anas platyrhynchos	94.36	0.00e+00	771.00
IUUC-Aca-004395	Anolis carolinensis	79.17	0.00e+00	670.00
IUUC-Ame-011325	Astyanax mexicanus	47.35	1.00e-67	249.00
IUUC-Bta-012613	Bos taurus	76.72	2.00e-176	610.00
IUUC-Cja-018856	Callithrix jacchus	76.23	0.00e+00	642.00
IUUC-Cfa-021019	Canis familiaris	76.23	1.00e-174	605.00
IUUC-Cpo-021845	Cavia porcellus	76.10	9.00e-176	608.00
IUUC-Csa-023380	Chlorocebus sabaeus	76.72	6.00e-178	616.00
IUUC-Cho-024733	Choloepus hoffmanni	63.96	4.00e-66	244.00
IUUC-Dre-028675	Danio rerio	51.72	2.00e-115	408.00
IUUC-Dno-030018	Dasypus novemcinctus	76.23	0.00e+00	626.00
IUUC-Dor-030599	Dipodomys ordii	70.26	1.00e-97	348.00
IUUC-Ete-033134	Echinops telfairi	75.00	0.00e+00	626.00
IUUC-Eca-033931	Equus caballus	76.47	2.00e-174	604.00
IUUC-Eeu-034903	Erinaceus europaeus	75.74	1.00e-174	605.00
IUUC-Fca-035642	Felis catus	76.94	1.00e-175	608.00
IUUC-Fal-037108	Ficedula albicollis	99.02	0.00e+00	836.00
IUUC-Gga-040903	Gallus gallus	94.00	0.00e+00	790.00
IUUC-Ggo-044635	Gorilla gorilla	76.96	6.00e-179	619.00
IUUC-Hsa-046345	Homo sapiens	76.96	8.00e-179	619.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	77.13	3.00e-170	590.00
IUUC-Lch-050599	Latimeria chalumnae	63.68	3.00e-151	527.00
IUUC-Loc-052378	Lepisosteus oculatus	64.05	5.00e-119	419.00
IUUC-Laf-053332	Loxodonta africana	76.96	1.00e-180	625.00
IUUC-Mcc-054705	Macaca mulatta	76.72	4.00e-178	616.00
IUUC-Meu-056825	Macropus eugenii	76.96	0.00e+00	650.00
IUUC-Mga-059528	Meleagris gallopavo	94.85	0.00e+00	810.00
IUUC-Mmr-060688	Microcebus murinus	77.21	7.00e-178	615.00
IUUC-Mdo-061882	Monodelphis domestica	75.98	0.00e+00	647.00
IUUC-Mmu-064352	Mus musculus	75.00	5.00e-180	623.00
IUUC-Mac-065363	Musa acuminata	38.81	1.00e-05	43.50
IUUC-Mpu-066712	Mustela putorius furo	77.04	2.00e-163	567.00
IUUC-Mlu-068093	Myotis lucifugus	75.06	1.00e-172	598.00
IUUC-Nle-069310	Nomascus leucogenys	76.47	8.00e-178	615.00
IUUC-Ont-071759	Oreochromis niloticus	61.36	1.00e-114	405.00
IUUC-Oan-073673	Ornithorhynchus anatinus	75.49	0.00e+00	647.00
IUUC-Ocu-074192	Oryctolagus cuniculus	76.47	3.00e-178	617.00
IUUC-Oba-075404	Oryza barthii	38.60	2.00e-06	46.60
IUUC-Obr-076671	Oryza brachyantha	40.00	5.00e-06	44.70
IUUC-Ogl-076954	Oryza glaberrima	38.60	2.00e-06	46.60
IUUC-Ola-087424	Oryzias latipes	58.51	4.00e-113	400.00
IUUC-Oga-088808	Otolemur garnettii	76.96	1.00e-177	615.00
IUUC-Oar-089553	Ovis aries	76.47	2.00e-176	610.00
IUUC-Ptr-090518	Pan troglodytes	76.72	5.00e-177	613.00
IUUC-Pan-092781	Papio anubis	76.96	3.00e-178	617.00
IUUC-Psi-093914	Pelodiscus sinensis	90.22	0.00e+00	768.00
IUUC-Pma-094162	Petromyzon marinus	36.00	4.00e-43	167.00
IUUC-Pfo-096346	Poecilia formosa	48.28	3.00e-111	394.00
IUUC-Pca-100914	Procavia capensis	75.98	0.00e+00	635.00
IUUC-Pva-102728	Pteropus vampyrus	75.98	8.00e-175	605.00
IUUC-Rno-105922	Rattus norvegicus	74.02	1.00e-169	588.00
IUUC-Sha-107124	Sarcophilus harrisii	75.49	0.00e+00	650.00
IUUC-Sar-113607	Sorex araneus	75.18	4.00e-169	587.00
IUUC-Ssc-116355	Sus scrofa	76.72	9.00e-178	615.00
IUUC-Tru-118737	Takifugu rubripes	59.06	1.00e-113	402.00
IUUC-Tsy-118908	Tarsius syrichta	76.23	3.00e-179	620.00
IUUC-Tni-119737	Tetraodon nigroviridis	33.12	4.00e-49	187.00
IUUC-Tbe-127258	Tupaia belangeri	77.45	1.00e-178	618.00
IUUC-Ttr-128921	Tursiops truncatus	35.65	8.00e-53	200.00
IUUC-Vpa-130138	Vicugna pacos	76.96	6.00e-177	612.00
IUUC-Xtr-132100	Xenopus tropicalis	59.31	3.00e-140	490.00
IUUC-Xma-133293	Xiphophorus maculatus	49.51	5.00e-113	400.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence