iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093128

Ensembl Protein ID

ENSPSIP00000014239.1

UniProt Accession

K7G1S8; K7G1S8_PELSI

Genbank Protein ID

ENSPSIP00000014239

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01021753

Gene Name

LONRF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000012737.1	ENSPSIT00000014306.1	ENSPSIP00000014239.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-08	34.3	275	323
E3 activity/RING/RING	3.50e-07	30.7	279	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           ++f C++ + l+ +Pv++p+G+t+ ++++e++l++  + cP+++++l+e 
   Q: 275  ADFECSLCMRLFFEPVTTPCGHTFCKNCLERCLDHAPQ-CPLCKESLKEY 323
           58***********************************9.********986 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH+f+++Cl++          + +CPlC+
   Q: 279  CSLCMRLFFE-PVTTPCGHTFCKNCLERC------LDHAPQCPLCK 317
           **********.9**************999......9*********7 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

LAELWHAGSV EXPRTGSRLG ELLSQGRFRE SLSAFSQALQ ADPSNLMLRI YRAESYAGLH 60
EFKTAIEELN VIISKMPNWP EIYFRKAKVL HDAGFVGDAL QLLLQCLSLD EDFVPAKLEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGCGGAGC TCTGGCACGC GGGGAGCGTC GAACTGTGTT TTGTAATCTC CTCCGCCCCT 60
TCCCCCACGC CGTGCCTCTC AGCCAATGGA GAGTGCCCGT TGTGGTCAGC TGACGCAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001989	Ailuropoda melanoleuca	76.40	0.00e+00	823.00
IUUC-Apl-003309	Anas platyrhynchos	83.57	0.00e+00	696.00
IUUC-Aca-004288	Anolis carolinensis	72.35	0.00e+00	828.00
IUUC-Afu-008802	Aspergillus fumigatus	29.74	9.00e-40	158.00
IUUC-Ang-009643	Aspergillus niger	33.23	3.00e-40	159.00
IUUC-Ame-010716	Astyanax mexicanus	57.12	5.00e-176	610.00
IUUC-Bta-012903	Bos taurus	74.04	0.00e+00	832.00
IUUC-Bdi-014333	Brachypodium distachyon	37.18	2.00e-43	169.00
IUUC-Cja-019312	Callithrix jacchus	74.56	0.00e+00	840.00
IUUC-Cfa-020159	Canis familiaris	75.61	0.00e+00	866.00
IUUC-Cpo-022528	Cavia porcellus	74.86	0.00e+00	790.00
IUUC-Csa-023361	Chlorocebus sabaeus	74.22	0.00e+00	797.00
IUUC-Cho-024549	Choloepus hoffmanni	69.17	0.00e+00	682.00
IUUC-Cme-027153	Cyanidioschyzon merolae	42.35	1.00e-16	80.90
IUUC-Dre-028195	Danio rerio	54.71	5.00e-171	594.00
IUUC-Dno-029284	Dasypus novemcinctus	75.28	0.00e+00	833.00
IUUC-Dor-031123	Dipodomys ordii	66.52	8.00e-174	603.00
IUUC-Ete-032455	Echinops telfairi	78.16	0.00e+00	665.00
IUUC-Eca-033248	Equus caballus	78.95	0.00e+00	650.00
IUUC-Eeu-034441	Erinaceus europaeus	78.85	0.00e+00	686.00
IUUC-Fca-035551	Felis catus	76.59	0.00e+00	840.00
IUUC-Fal-036731	Ficedula albicollis	82.92	0.00e+00	900.00
IUUC-Gmo-039315	Gadus morhua	51.97	6.00e-152	530.00
IUUC-Gga-040888	Gallus gallus	84.38	0.00e+00	734.00
IUUC-Gac-042121	Gasterosteus aculeatus	54.91	4.00e-170	591.00
IUUC-Ggo-044985	Gorilla gorilla	74.43	0.00e+00	841.00
IUUC-Hsa-046592	Homo sapiens	74.22	0.00e+00	833.00
IUUC-Hvu-047145	Hordeum vulgare	42.98	1.00e-27	117.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	75.09	0.00e+00	836.00
IUUC-Lch-050404	Latimeria chalumnae	62.67	0.00e+00	682.00
IUUC-Lma-053145	Leptosphaeria maculans	30.43	3.00e-41	162.00
IUUC-Laf-053431	Loxodonta africana	76.22	0.00e+00	836.00
IUUC-Mcc-055751	Macaca mulatta	73.00	0.00e+00	770.00
IUUC-Mla-058946	Melampsora laricipopulina	35.64	1.00e-47	183.00
IUUC-Mga-059472	Meleagris gallopavo	87.50	2.00e-142	497.00
IUUC-Mvi-060228	Microbotryum violaceum	31.62	2.00e-49	191.00
IUUC-Mmr-061283	Microcebus murinus	74.91	0.00e+00	842.00
IUUC-Mmu-063169	Mus musculus	72.82	0.00e+00	800.00
IUUC-Mpu-066537	Mustela putorius furo	75.44	0.00e+00	824.00
IUUC-Mlu-067497	Myotis lucifugus	76.03	0.00e+00	830.00
IUUC-Nfi-068337	Neosartorya fischeri	29.21	2.00e-40	159.00
IUUC-Nle-068971	Nomascus leucogenys	75.61	0.00e+00	804.00
IUUC-Opr-070791	Ochotona princeps	76.77	0.00e+00	742.00
IUUC-Ont-071548	Oreochromis niloticus	57.86	3.00e-177	615.00
IUUC-Oan-072747	Ornithorhynchus anatinus	80.95	0.00e+00	686.00
IUUC-Ocu-074928	Oryctolagus cuniculus	79.95	0.00e+00	678.00
IUUC-Oba-075239	Oryza barthii	40.98	6.00e-44	171.00
IUUC-Ogu-078154	Oryza glumaepatula	41.46	2.00e-44	173.00
IUUC-Oin-079067	Oryza indica	40.98	4.00e-44	172.00
IUUC-Olo-080663	Oryza longistaminata	40.98	8.00e-44	171.00
IUUC-Oni-082119	Oryza nivara	40.98	6.00e-44	171.00
IUUC-Oru-085190	Oryza rufipogon	40.98	9.00e-44	171.00
IUUC-Ola-086977	Oryzias latipes	57.14	3.00e-179	621.00
IUUC-Oga-088719	Otolemur garnettii	74.22	0.00e+00	841.00
IUUC-Oar-089577	Ovis aries	75.56	0.00e+00	828.00
IUUC-Ptr-090711	Pan troglodytes	74.22	0.00e+00	832.00
IUUC-Pan-092587	Papio anubis	74.04	0.00e+00	817.00
IUUC-Pfo-096474	Poecilia formosa	56.11	2.00e-177	615.00
IUUC-Pab-097800	Pongo abelii	73.17	0.00e+00	817.00
IUUC-Pgr-103289	Puccinia graminis	27.76	2.00e-30	126.00
IUUC-Ptt-103898	Puccinia triticina	28.14	4.00e-29	122.00
IUUC-Pte-104214	Pyrenophora teres	31.45	1.00e-38	154.00
IUUC-Rno-105718	Rattus norvegicus	73.09	0.00e+00	792.00
IUUC-Sar-113220	Sorex araneus	76.65	0.00e+00	625.00
IUUC-Sbi-114779	Sorghum bicolor	35.08	2.00e-30	126.00
IUUC-Ssc-115733	Sus scrofa	73.69	0.00e+00	845.00
IUUC-Tgu-117431	Taeniopygia guttata	74.87	0.00e+00	851.00
IUUC-Tru-118274	Takifugu rubripes	57.43	3.00e-170	591.00
IUUC-Tsy-119043	Tarsius syrichta	76.17	0.00e+00	816.00
IUUC-Tni-120766	Tetraodon nigroviridis	52.63	7.00e-160	556.00
IUUC-Tur-126297	Triticum urartu	41.98	4.00e-34	139.00
IUUC-Tbe-127284	Tupaia belangeri	76.68	0.00e+00	663.00
IUUC-Vpa-130408	Vicugna pacos	69.36	0.00e+00	734.00
IUUC-Xtr-132417	Xenopus tropicalis	63.31	0.00e+00	698.00
IUUC-Xma-134099	Xiphophorus maculatus	55.61	3.00e-177	615.00
IUUC-Zma-135914	Zea mays	39.02	6.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence