iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131166

UUCD1 version

UUC-ViV-00402

Ensembl Protein ID

VIT_17s0000g07730.t01

UniProt Accession

F6GSV2; F6GSV2_VITVI

Genbank Protein ID

CCB43009.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN594950

Gene Name

VIT_17s0000g07730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_17s0000g07730	VIT_17s0000g07730.t01	VIT_17s0000g07730.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.70e-16	59.5	23	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
            p+ef+CpIs+ lM dPvv++sG+t++r s++ + +        ++++ + + ++Pnl++++ i +wc++++
   Q: 23   SPKEFMCPISGSLMADPVVVASGQTFERISVQVCRNLAFVPVLGDGSRPDFTVVIPNLAMKSAILNWCAASR 94
           69********************************99998844445555555666**************9876 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGGNGKHRWK ISFRSSSSMP KQSPKEFMCP ISGSLMADPV VVASGQTFER ISVQVCRNLA 60
FVPVLGDGSR PDFTVVIPNL AMKSAILNWC AASRVDRPTE PEYGSVETLV RAAMGSDGDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTCATCTT CCAAGGAGCA AGCCGCGTAC CAATGTGAGA AAAAGTCGTT GGTTTTCTTC 60
CTCTCTGTAT CTCATCTCGC CCAGTCAAAC TGTATTATAG TATAAGAGGG AGCTTACGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100244998

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005887	Arabidopsis lyrata	54.85	1.00e-152	532.00
IUUC-Ath-007165	Arabidopsis thaliana	53.10	3.00e-148	518.00
IUUC-Bol-015998	Brassica oleracea	52.98	3.00e-129	454.00
IUUC-Bra-017987	Brassica rapa	54.49	1.00e-130	459.00
IUUC-Csa-023874	Chlorocebus sabaeus	31.39	3.00e-10	60.10
IUUC-Fca-035957	Felis catus	33.33	1.00e-11	65.10
IUUC-Gma-043462	Glycine max	65.51	1.00e-179	622.00
IUUC-Hsa-046644	Homo sapiens	31.39	4.00e-10	59.70
IUUC-Itr-048617	Ictidomys tridecemlineatus	31.78	7.00e-10	58.90
IUUC-Mcc-055873	Macaca mulatta	31.39	2.00e-10	60.10
IUUC-Mtr-057660	Medicago truncatula	66.94	5.00e-157	546.00
IUUC-Mga-059688	Meleagris gallopavo	32.85	2.00e-12	67.80
IUUC-Mac-064827	Musa acuminata	38.02	4.00e-64	238.00
IUUC-Opr-070282	Ochotona princeps	29.20	8.00e-09	55.10
IUUC-Ocu-074455	Oryctolagus cuniculus	31.78	1.00e-09	58.20
IUUC-Pan-092171	Papio anubis	32.37	1.00e-10	61.60
IUUC-Pop-099467	Populus trichocarpa	66.42	1.00e-178	619.00
IUUC-Pca-100151	Procavia capensis	31.01	2.00e-09	57.00
IUUC-Ppe-101245	Prunus persica	64.18	6.00e-167	579.00
IUUC-Smo-109005	Selaginella moellendorffii	39.46	4.00e-40	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence