iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116137

Ensembl Protein ID

ENSSSCP00000017483.2

UniProt Accession

F1SRP4; F1SRP4_PIG

Genbank Protein ID

ENSSSCP00000017483

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU928390

Gene Name

KDM7A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000016501.2	ENSSSCT00000017965.2	ENSSSCP00000017483.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.30e-09	36.0	38	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC+++++ ++ ++eC++C++wfH  C++ + e    + + + Cp+C 
   Q: 38   VYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVE-EHHAVDIDLYHCPNCA 86
           69*.******************************.999999999******6 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAGAAAAVAA GAAAGAAAAA VSVAAPGRAS APPPPPPVYC VCRQPYDVNR FMIECDICKD 60
WFHGSCVGVE EHHAVDIDLY HCPNCAVLHG SSLTKNPVKK RRNWHRHDYT EVDDGSKPVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCCGCCG CCGGCGCCGC GGCTGCTGCT CCGGCTGCTG CAGGAGGCGG CGCTGGCTGG 60
CGGCTGCGCT CGCTCCAGTC GGCGAGCGGA GCAGCGAGCG AGCGTGTGTG TGTTTTTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0071558--F:histone demethylase activity (H3-K27 specific)
GO:0051864--F:histone demethylase activity (H3-K36 specific)
GO:0032454--F:histone demethylase activity (H3-K9 specific)
GO:0035575--F:histone demethylase activity (H4-K20 specific)
GO:0005506--F:iron ion binding
GO:0008270--F:zinc ion binding
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011675	Astyanax mexicanus	58.40	0.00e+00	764.00
IUUC-Cja-018757	Callithrix jacchus	92.95	0.00e+00	1665.00
IUUC-Csa-023888	Chlorocebus sabaeus	92.95	0.00e+00	1690.00
IUUC-Cgl-026411	Colletotrichum gloeosporioides	58.00	1.00e-12	67.40
IUUC-Cme-027118	Cyanidioschyzon merolae	30.32	6.00e-52	198.00
IUUC-Dre-027922	Danio rerio	57.37	0.00e+00	764.00
IUUC-Dno-030062	Dasypus novemcinctus	92.63	0.00e+00	1649.00
IUUC-Gga-040633	Gallus gallus	93.98	0.00e+00	714.00
IUUC-Gac-041447	Gasterosteus aculeatus	61.02	0.00e+00	806.00
IUUC-Gma-043719	Glycine max	42.86	9.00e-09	53.50
IUUC-Hsa-046706	Homo sapiens	92.51	0.00e+00	1662.00
IUUC-Itr-048422	Ictidomys tridecemlineatus	50.00	1.00e-13	73.20
IUUC-Loc-052781	Lepisosteus oculatus	61.27	0.00e+00	999.00
IUUC-Mtr-058517	Medicago truncatula	40.82	1.00e-08	52.80
IUUC-Mmr-061767	Microcebus murinus	89.76	0.00e+00	1610.00
IUUC-Mdo-062778	Monodelphis domestica	85.37	0.00e+00	1535.00
IUUC-Mmu-064343	Mus musculus	88.44	0.00e+00	1545.00
IUUC-Ola-087006	Oryzias latipes	62.67	0.00e+00	818.00
IUUC-Ptr-090549	Pan troglodytes	92.40	0.00e+00	1660.00
IUUC-Pan-091786	Papio anubis	92.74	0.00e+00	1688.00
IUUC-Ppe-101614	Prunus persica	42.86	6.00e-09	53.90
IUUC-Smo-109024	Selaginella moellendorffii	36.42	6.00e-59	221.00
IUUC-Tru-118331	Takifugu rubripes	61.84	0.00e+00	816.00
IUUC-Tni-119870	Tetraodon nigroviridis	79.23	0.00e+00	756.00
IUUC-Tur-126461	Triticum urartu	40.74	5.00e-11	60.50
IUUC-Ttr-129014	Tursiops truncatus	93.61	0.00e+00	1664.00
IUUC-Uma-129458	Ustilago maydis	31.83	2.00e-60	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence