iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
dbPAF	dbPTM	UniProt	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	17296727
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	SOCS	17296727

Organism

Saccharomyces cerevisiae

Protein Sequence
(Fasta)

MKSLQTLCEI SLMRNHSNIQ SVSNVPYHLL KRILQKVKIP QLLKLEKSNV LLIFDDDELW 60
LEFLRQDFPT NVHEQFVSKR DIICKYYFDF VKENDIELYH SNQDLLKSCV RQSVVKDIRN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAAGTT TACAAACACT ATGTGAAATC TCATTGATGA GAAATCATTC AAACATACAA 60
TCTGTGAGTA ATGTCCCCTA TCACTTATTA AAGAGGATAC TGCAGAAAGT AAAAATACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR010684--RNA_pol_II_trans_fac_SIII_A

PROSITE

PS50181--FBOX

Pfam

PF06881--Elongin_A

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0070449--C:elongin complex
GO:0016021--C:integral component of membrane
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

sce:YNL230C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001705	Ailuropoda melanoleuca	33.82	2.00e-06	45.80
IUUC-Atr-002990	Amborella trichopoda	37.14	7.80e-02	26.90
IUUC-Apl-003659	Anas platyrhynchos	29.89	2.00e-08	52.40
IUUC-Aca-004513	Anolis carolinensis	32.18	2.00e-08	52.00
IUUC-Ath-006784	Arabidopsis thaliana	47.83	8.90e-02	29.30
IUUC-Ago-007835	Ashbya gossypii	34.15	2.00e-42	164.00
IUUC-Acl-008085	Aspergillus clavatus	25.00	5.00e-10	56.60
IUUC-Afu-008931	Aspergillus fumigatus	25.47	3.00e-10	57.80
IUUC-Ani-009161	Aspergillus nidulans	26.95	3.00e-12	63.50
IUUC-Ang-009875	Aspergillus niger	35.96	2.00e-11	60.80
IUUC-Ame-011668	Astyanax mexicanus	29.41	1.00e-06	46.20
IUUC-Bgr-012029	Blumeria graminis	38.10	2.00e-03	35.80
IUUC-Bta-013219	Bos taurus	25.29	5.00e-04	38.10
IUUC-Bci-014000	Botrytis cinerea	24.55	1.00e-05	42.40
IUUC-Bdi-014527	Brachypodium distachyon	32.84	2.00e-03	34.30
IUUC-Bol-016438	Brassica oleracea	32.35	7.00e-03	33.10
IUUC-Bra-017526	Brassica rapa	32.35	1.00e-02	32.70
IUUC-Cel-018281	Caenorhabditis elegans	28.03	8.00e-07	46.20
IUUC-Cja-018759	Callithrix jacchus	30.88	6.00e-05	40.80
IUUC-Cfa-020766	Canis familiaris	32.35	8.00e-06	43.90
IUUC-Cpo-022250	Cavia porcellus	36.76	3.00e-07	48.90
IUUC-Csa-023293	Chlorocebus sabaeus	33.82	2.00e-06	45.40
IUUC-Cin-025556	Ciona intestinalis	34.48	6.00e-10	57.00
IUUC-Csv-026153	Ciona savignyi	33.33	2.00e-10	57.00
IUUC-Cgl-026733	Colletotrichum gloeosporioides	32.22	3.00e-07	47.80
IUUC-Cne-026936	Cryptococcus neoformans	18.60	4.00e-05	40.40
IUUC-Dre-027828	Danio rerio	27.27	3.00e-07	48.10
IUUC-Dse-031436	Dothistroma septosporum	34.21	2.00e-06	45.10
IUUC-Dme-031809	Drosophila melanogaster	26.51	2.00e-05	42.40
IUUC-Ete-032677	Echinops telfairi	34.15	5.00e-09	54.30
IUUC-Eca-034045	Equus caballus	34.15	6.00e-08	50.10
IUUC-Eeu-035063	Erinaceus europaeus	35.29	3.00e-06	45.10
IUUC-Fca-036488	Felis catus	33.82	2.00e-06	46.20
IUUC-Fal-037501	Ficedula albicollis	31.03	1.00e-08	53.10
IUUC-Fox-038013	Fusarium oxysporum	26.32	8.00e-04	36.20
IUUC-Fso-038123	Fusarium solani	22.81	6.00e-05	39.70
IUUC-Gmo-038614	Gadus morhua	31.71	4.00e-09	54.30
IUUC-Ggr-039793	Gaeumannomyces graminis	33.82	4.00e-06	43.90
IUUC-Gga-040738	Gallus gallus	31.03	3.00e-08	52.00
IUUC-Gac-041381	Gasterosteus aculeatus	24.14	2.00e-07	48.50
IUUC-Gma-042964	Glycine max	32.88	1.00e-03	34.30
IUUC-Ggo-045139	Gorilla gorilla	33.82	2.00e-06	45.80
IUUC-Hsa-046083	Homo sapiens	33.82	2.00e-06	45.80
IUUC-Hvu-047501	Hordeum vulgare	33.96	5.50e-02	30.00
IUUC-Itr-048970	Ictidomys tridecemlineatus	33.82	4.00e-06	45.10
IUUC-Kpa-049376	Komagataella pastoris	23.25	7.00e-08	48.90
IUUC-Lch-050369	Latimeria chalumnae	25.29	6.00e-07	47.40
IUUC-Lpe-050727	Leersia perrieri	37.31	2.00e-05	41.20
IUUC-Loc-052347	Lepisosteus oculatus	30.49	6.00e-09	53.90
IUUC-Lma-053027	Leptosphaeria maculans	26.67	1.70e-02	31.20
IUUC-Laf-053575	Loxodonta africana	35.29	2.00e-06	46.20
IUUC-Mcc-054823	Macaca mulatta	33.82	3.00e-06	45.40
IUUC-Meu-056878	Macropus eugenii	31.25	1.00e-06	46.20
IUUC-Mor-056948	Magnaporthe oryzae	38.24	1.00e-05	42.40
IUUC-Mpo-057617	Magnaporthe poae	26.13	6.80e-02	30.80
IUUC-Mtr-057811	Medicago truncatula	31.65	6.00e-06	42.40
IUUC-Mla-058917	Melampsora laricipopulina	33.33	9.00e-06	42.40
IUUC-Mga-059445	Meleagris gallopavo	31.03	3.00e-08	52.00
IUUC-Mmr-060665	Microcebus murinus	33.82	3.00e-06	45.10
IUUC-Mdo-062430	Monodelphis domestica	32.93	1.00e-07	49.70
IUUC-Mmu-064173	Mus musculus	33.82	1.00e-06	46.20
IUUC-Mac-065364	Musa acuminata	33.82	1.80e-02	30.40
IUUC-Mpu-066344	Mustela putorius furo	33.82	4.00e-06	45.10
IUUC-Mlu-068101	Myotis lucifugus	33.82	2.00e-06	45.80
IUUC-Nfi-068489	Neosartorya fischeri	26.71	1.00e-09	55.50
IUUC-Opr-070498	Ochotona princeps	36.00	2.00e-05	41.60
IUUC-Ont-071579	Oreochromis niloticus	33.82	2.00e-08	52.40
IUUC-Oan-072862	Ornithorhynchus anatinus	32.18	4.00e-09	54.70
IUUC-Ocu-073882	Oryctolagus cuniculus	33.82	2.00e-06	45.80
IUUC-Oba-075710	Oryza barthii	29.07	1.00e-03	34.70
IUUC-Ogl-077171	Oryza glaberrima	29.07	2.00e-03	34.70
IUUC-Ogu-078827	Oryza glumaepatula	29.07	2.00e-03	35.00
IUUC-Oin-080204	Oryza indica	29.07	1.00e-03	34.70
IUUC-Olo-081049	Oryza longistaminata	27.91	9.00e-03	32.30
IUUC-Ome-081128	Oryza meridionalis	30.77	5.00e-03	32.00
IUUC-Oni-083077	Oryza nivara	29.07	9.00e-04	35.40
IUUC-Opu-083270	Oryza punctata	32.05	4.00e-04	36.60
IUUC-Oru-084299	Oryza rufipogon	30.77	5.00e-03	32.00
IUUC-Osa-085671	Oryza sativa	30.77	2.00e-03	31.60
IUUC-Ola-086456	Oryzias latipes	31.71	6.00e-08	50.80
IUUC-Oga-087918	Otolemur garnettii	33.82	3.00e-06	45.10
IUUC-Oar-089663	Ovis aries	30.59	2.00e-07	49.30
IUUC-Ptr-091033	Pan troglodytes	33.82	2.00e-06	45.40
IUUC-Pan-092277	Papio anubis	33.82	2.00e-06	45.80
IUUC-Psi-094086	Pelodiscus sinensis	32.18	3.00e-08	52.00
IUUC-Pma-094683	Petromyzon marinus	29.49	7.00e-06	42.40
IUUC-Pno-094930	Phaeosphaeria nodorum	21.23	2.00e-07	47.40
IUUC-Pfo-097334	Poecilia formosa	32.93	1.00e-09	56.20
IUUC-Pab-098345	Pongo abelii	33.82	2.00e-06	45.80
IUUC-Pop-099683	Populus trichocarpa	35.29	4.00e-03	31.60
IUUC-Pca-100737	Procavia capensis	35.29	1.00e-06	46.60
IUUC-Pva-102497	Pteropus vampyrus	33.82	3.00e-06	45.40
IUUC-Pgr-103464	Puccinia graminis	34.33	2.00e-07	46.20
IUUC-Pte-104288	Pyrenophora teres	23.61	1.00e-06	45.10
IUUC-Pyt-104772	Pyrenophora triticirepentis	22.69	1.00e-06	45.10
IUUC-Rno-105177	Rattus norvegicus	33.82	2.00e-06	46.20
IUUC-Sha-106480	Sarcophilus harrisii	32.93	9.00e-08	50.10
IUUC-Sja-107782	Schizosaccharomyces japonicus	22.81	1.00e-05	41.20
IUUC-Spo-108157	Schizosaccharomyces pombe	30.88	2.00e-04	37.00
IUUC-Smo-109420	Selaginella moellendorffii	30.14	6.30e-01	28.50
IUUC-Sit-109960	Setaria italica	31.25	1.00e-03	34.70
IUUC-Sar-113255	Sorex araneus	35.29	2.00e-06	46.20
IUUC-Sbi-114855	Sorghum bicolor	34.33	7.00e-03	32.30
IUUC-Sre-115076	Sporisorium reilianum	24.26	1.00e-09	55.80
IUUC-Ssc-115875	Sus scrofa	30.59	2.00e-07	49.30
IUUC-Tgu-117066	Taeniopygia guttata	31.03	1.00e-08	52.80
IUUC-Tru-117881	Takifugu rubripes	30.77	4.00e-08	51.20
IUUC-Tsy-119531	Tarsius syrichta	31.71	2.00e-06	45.80
IUUC-Tni-120325	Tetraodon nigroviridis	29.89	6.00e-10	57.40
IUUC-Tre-122105	Trichoderma reesei	24.14	4.00e-04	36.20
IUUC-Tvi-122542	Trichoderma virens	25.66	4.00e-05	39.30
IUUC-Tae-122727	Triticum aestivum	37.31	7.00e-05	39.30
IUUC-Tur-126506	Triticum urartu	37.31	1.00e-03	34.70
IUUC-Tbe-127648	Tupaia belangeri	33.82	3.00e-06	45.10
IUUC-Ttr-129287	Tursiops truncatus	31.76	1.00e-07	50.10
IUUC-Uma-129543	Ustilago maydis	24.00	3.00e-09	55.10
IUUC-Vpa-130645	Vicugna pacos	30.59	2.00e-07	48.90
IUUC-Xtr-132709	Xenopus tropicalis	29.89	1.00e-08	53.10
IUUC-Xma-133858	Xiphophorus maculatus	32.93	8.00e-10	56.60
IUUC-Yli-134386	Yarrowia lipolytica	26.14	7.00e-10	56.20
IUUC-Zma-135412	Zea mays	35.82	3.00e-04	36.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence