iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091254

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03005453

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000039222.1	ENSPTRT00000075357.1	ENSPTRP00000060015.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-09	36.1	132	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++++      ++  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 132  CPICMDRYseimqnRRLIVSTECGHVFCSQCL------RDSLKNANTCPTCR 177
           ********66665444366788*********9......4559*********8 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MSTRKHRGGA INSRQAQKRT REATSTPEIS LEAEPIELVE TAGDEIVDLT CESLEPVVVD 60
LTHNDSVVIV DKRRRPRRNA RRLPQDHADS CVVSSDDELL SRDRDVYVTT HTSRNARDEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTACAA GAAAGCATCG AGGTGGAGCA ATAAATTCTA GACAAGCCCA GAAGCGAACA 60
CGGGAAGCAA CCTCCACCCC TGAGATTTCC TTGGAAGCAG AACCCATAGA ACTCGTGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000359	Aegilops tauschii	33.67	6.00e-07	46.20
IUUC-Aml-002206	Ailuropoda melanoleuca	87.70	9.00e-78	282.00
IUUC-Atr-002771	Amborella trichopoda	33.85	5.00e-08	50.80
IUUC-Apl-004120	Anas platyrhynchos	67.86	3.00e-65	240.00
IUUC-Aca-004236	Anolis carolinensis	58.42	3.00e-53	201.00
IUUC-Aly-006041	Arabidopsis lyrata	38.98	1.00e-10	59.30
IUUC-Ath-007007	Arabidopsis thaliana	38.98	1.00e-10	59.30
IUUC-Ame-011555	Astyanax mexicanus	47.83	4.00e-32	130.00
IUUC-Bta-012913	Bos taurus	81.05	5.00e-79	286.00
IUUC-Bdi-014655	Brachypodium distachyon	37.29	6.00e-09	54.30
IUUC-Bol-016418	Brassica oleracea	37.70	2.00e-10	59.30
IUUC-Bra-016890	Brassica rapa	38.60	2.00e-09	55.50
IUUC-Cel-018585	Caenorhabditis elegans	35.38	3.00e-08	51.60
IUUC-Cja-019151	Callithrix jacchus	90.05	4.00e-80	290.00
IUUC-Cfa-020868	Canis familiaris	85.79	2.00e-75	274.00
IUUC-Cpo-022249	Cavia porcellus	81.28	3.00e-67	247.00
IUUC-Csa-024125	Chlorocebus sabaeus	92.63	1.00e-84	304.00
IUUC-Cin-025749	Ciona intestinalis	36.07	2.00e-10	58.90
IUUC-Csv-026318	Ciona savignyi	36.07	9.00e-10	56.60
IUUC-Dre-028145	Danio rerio	42.50	4.00e-30	124.00
IUUC-Dno-029605	Dasypus novemcinctus	87.37	3.00e-87	313.00
IUUC-Dor-030898	Dipodomys ordii	82.11	4.00e-82	296.00
IUUC-Dme-032177	Drosophila melanogaster	44.07	1.00e-11	63.50
IUUC-Ete-032694	Echinops telfairi	79.68	2.00e-65	241.00
IUUC-Eca-033443	Equus caballus	88.95	3.00e-80	290.00
IUUC-Eeu-034603	Erinaceus europaeus	86.41	8.00e-49	184.00
IUUC-Fca-035507	Felis catus	85.56	1.00e-73	268.00
IUUC-Fal-037382	Ficedula albicollis	65.31	1.00e-59	222.00
IUUC-Gmo-038960	Gadus morhua	65.31	7.00e-16	75.50
IUUC-Gga-040493	Gallus gallus	64.62	7.00e-62	229.00
IUUC-Gac-042194	Gasterosteus aculeatus	45.03	2.00e-31	128.00
IUUC-Gma-042666	Glycine max	38.98	2.00e-09	55.80
IUUC-Ggo-044726	Gorilla gorilla	94.21	1.00e-85	308.00
IUUC-Hsa-046212	Homo sapiens	94.21	1.00e-85	308.00
IUUC-Itr-047892	Ictidomys tridecemlineatus	90.37	6.00e-79	286.00
IUUC-Lpe-050920	Leersia perrieri	34.43	4.00e-09	54.70
IUUC-Loc-051907	Lepisosteus oculatus	42.77	1.00e-31	129.00
IUUC-Laf-054145	Loxodonta africana	83.96	2.00e-73	268.00
IUUC-Mcc-055689	Macaca mulatta	93.16	2.00e-84	304.00
IUUC-Meu-056654	Macropus eugenii	43.85	3.00e-35	140.00
IUUC-Mtr-058314	Medicago truncatula	41.94	2.00e-11	61.60
IUUC-Mla-058874	Melampsora laricipopulina	29.21	1.00e-05	44.70
IUUC-Mga-059303	Meleagris gallopavo	66.84	2.00e-64	238.00
IUUC-Mmr-061355	Microcebus murinus	91.05	7.00e-82	295.00
IUUC-Mdo-062968	Monodelphis domestica	62.96	3.00e-61	227.00
IUUC-Mmu-064421	Mus musculus	85.56	9.00e-85	305.00
IUUC-Mac-064573	Musa acuminata	30.69	1.00e-10	60.10
IUUC-Mpu-066522	Mustela putorius furo	87.70	6.00e-78	283.00
IUUC-Mlu-067065	Myotis lucifugus	83.42	7.00e-74	269.00
IUUC-Nle-069198	Nomascus leucogenys	92.63	3.00e-84	303.00
IUUC-Opr-071141	Ochotona princeps	82.89	6.00e-79	286.00
IUUC-Oan-073341	Ornithorhynchus anatinus	63.27	4.00e-33	133.00
IUUC-Ocu-073787	Oryctolagus cuniculus	90.37	3.00e-88	317.00
IUUC-Oba-075460	Oryza barthii	37.10	6.00e-10	57.40
IUUC-Ogl-077094	Oryza glaberrima	34.18	1.00e-10	60.10
IUUC-Ogu-078677	Oryza glumaepatula	37.10	6.00e-10	57.80
IUUC-Oin-079992	Oryza indica	34.18	1.00e-10	60.10
IUUC-Olo-080257	Oryza longistaminata	38.71	4.00e-10	58.20
IUUC-Ome-081943	Oryza meridionalis	34.18	8.00e-11	60.80
IUUC-Oni-082671	Oryza nivara	37.10	6.00e-10	57.40
IUUC-Opu-083644	Oryza punctata	37.10	1.00e-09	57.00
IUUC-Oru-084650	Oryza rufipogon	37.10	6.00e-10	57.40
IUUC-Osa-086110	Oryza sativa	34.18	1.00e-10	59.70
IUUC-Ola-086970	Oryzias latipes	39.80	1.00e-30	125.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	1.00e-09	56.20
IUUC-Oga-088242	Otolemur garnettii	89.84	1.00e-87	315.00
IUUC-Oar-089469	Ovis aries	81.82	4.00e-82	296.00
IUUC-Pan-092776	Papio anubis	93.16	2.00e-84	304.00
IUUC-Psi-093929	Pelodiscus sinensis	67.01	2.00e-62	231.00
IUUC-Pma-094118	Petromyzon marinus	46.43	9.00e-19	84.30
IUUC-Ppa-095567	Physcomitrella patens	42.62	3.00e-10	58.50
IUUC-Pfo-097412	Poecilia formosa	45.12	3.00e-30	124.00
IUUC-Pab-097663	Pongo abelii	94.21	2.00e-96	344.00
IUUC-Pop-099483	Populus trichocarpa	38.71	2.00e-10	59.30
IUUC-Pca-100463	Procavia capensis	79.43	8.00e-47	179.00
IUUC-Ppe-101755	Prunus persica	38.71	2.00e-10	58.20
IUUC-Pva-102594	Pteropus vampyrus	85.11	2.00e-57	214.00
IUUC-Rno-105460	Rattus norvegicus	86.24	3.00e-76	277.00
IUUC-Sha-107487	Sarcophilus harrisii	67.20	4.00e-62	230.00
IUUC-Sit-109959	Setaria italica	37.29	6.00e-05	41.20
IUUC-Stu-112694	Solanum tuberosum	38.71	3.00e-10	58.20
IUUC-Sar-113601	Sorex araneus	83.42	3.00e-72	263.00
IUUC-Sbi-114398	Sorghum bicolor	34.43	3.00e-04	38.50
IUUC-Ssc-115911	Sus scrofa	88.42	2.00e-79	288.00
IUUC-Tgu-117264	Taeniopygia guttata	66.67	3.00e-58	217.00
IUUC-Tru-117663	Takifugu rubripes	44.91	1.00e-32	131.00
IUUC-Tsy-118883	Tarsius syrichta	82.43	8.00e-61	225.00
IUUC-Tca-121320	Theobroma cacao	37.10	1.00e-06	46.60
IUUC-Tvi-122382	Trichoderma virens	31.25	3.00e-05	42.40
IUUC-Tae-123990	Triticum aestivum	37.10	8.00e-07	46.60
IUUC-Ttr-128950	Tursiops truncatus	61.05	8.00e-60	223.00
IUUC-Vvi-130833	Vitis vinifera	40.32	4.00e-11	61.60
IUUC-Xtr-132879	Xenopus tropicalis	56.49	1.00e-35	142.00
IUUC-Xma-133319	Xiphophorus maculatus	44.22	1.00e-29	121.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence