iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036658

Ensembl Protein ID

ENSFALP00000008267.1

UniProt Accession

U3JZR3; U3JZR3_FICAL

Genbank Protein ID

ENSFALP00000008267

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01010652

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000007927.1	ENSFALT00000008301.1	ENSFALP00000008267.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.50e-09	35.6	292	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+a+qaL +++n+leaA+++Ll+
   Q: 292  DEKALKHITEMGFSKEAARQALMDNSNSLEAALNFLLN 329
           78999*******************************97 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MEVWRARIDR HCLYSTARYL SDEGIEACLS SSEKVNTNDI ILVALNTDLR TIGKKFLPSD 60
INGGKVEKLE GPCVLQIQKI RNVAAPKDNE ESQAAPRMLR LQMTDGHTSC TAIEYSSMSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGAAAAAA GGGAAGTTTT TTGATGGTGG CAGCAGCATT TCTGTGCCAG GTGATGCCCA 60
GTGTCTCCTT GATTTATAAA GGAAGGTCGG GGGAGACTGC TTGGGATGGA GGTGTGGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity
GO:0006397--P:mRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	34.13	2.00e-16	79.30
IUUC-Aml-001751	Ailuropoda melanoleuca	75.48	0.00e+00	1009.00
IUUC-Atr-002788	Amborella trichopoda	32.92	1.00e-21	97.40
IUUC-Apl-004055	Anas platyrhynchos	92.32	0.00e+00	1174.00
IUUC-Aca-004367	Anolis carolinensis	76.12	0.00e+00	1036.00
IUUC-Aly-006072	Arabidopsis lyrata	34.97	2.00e-23	102.00
IUUC-Ath-007491	Arabidopsis thaliana	37.41	9.00e-23	100.00
IUUC-Ame-011439	Astyanax mexicanus	67.43	7.00e-110	391.00
IUUC-Bta-012894	Bos taurus	71.85	0.00e+00	972.00
IUUC-Bdi-014462	Brachypodium distachyon	33.52	2.00e-21	96.30
IUUC-Bol-015343	Brassica oleracea	35.68	2.00e-23	103.00
IUUC-Bra-016787	Brassica rapa	34.52	1.00e-22	100.00
IUUC-Cel-018154	Caenorhabditis elegans	37.27	2.00e-28	120.00
IUUC-Cja-019364	Callithrix jacchus	73.81	0.00e+00	873.00
IUUC-Cfa-021166	Canis familiaris	75.54	0.00e+00	989.00
IUUC-Cpo-021678	Cavia porcellus	65.20	0.00e+00	723.00
IUUC-Csa-023299	Chlorocebus sabaeus	74.36	0.00e+00	1053.00
IUUC-Cho-024694	Choloepus hoffmanni	85.71	9.00e-125	440.00
IUUC-Cin-025191	Ciona intestinalis	42.92	1.00e-41	162.00
IUUC-Csv-026348	Ciona savignyi	50.98	1.00e-11	61.20
IUUC-Dre-028715	Danio rerio	50.07	2.00e-164	572.00
IUUC-Dno-030091	Dasypus novemcinctus	74.23	0.00e+00	1025.00
IUUC-Dor-030807	Dipodomys ordii	64.01	0.00e+00	711.00
IUUC-Dme-031770	Drosophila melanogaster	32.71	6.00e-39	155.00
IUUC-Ete-032507	Echinops telfairi	54.82	5.00e-146	510.00
IUUC-Eca-033406	Equus caballus	72.14	0.00e+00	786.00
IUUC-Eeu-034600	Erinaceus europaeus	67.02	0.00e+00	734.00
IUUC-Fca-035916	Felis catus	75.82	0.00e+00	1013.00
IUUC-Gmo-038974	Gadus morhua	61.64	3.00e-100	358.00
IUUC-Gga-040195	Gallus gallus	91.30	0.00e+00	1309.00
IUUC-Gac-042537	Gasterosteus aculeatus	47.97	9.00e-160	556.00
IUUC-Gma-044234	Glycine max	35.64	1.00e-24	107.00
IUUC-Ggo-044715	Gorilla gorilla	72.52	0.00e+00	891.00
IUUC-Hsa-045814	Homo sapiens	74.50	0.00e+00	1050.00
IUUC-Hvu-047365	Hordeum vulgare	33.33	1.00e-17	84.00
IUUC-Itr-047866	Ictidomys tridecemlineatus	74.86	0.00e+00	1013.00
IUUC-Kpa-049313	Komagataella pastoris	28.57	3.00e-03	37.00
IUUC-Lch-050393	Latimeria chalumnae	61.88	0.00e+00	772.00
IUUC-Lpe-050691	Leersia perrieri	34.18	5.00e-21	95.50
IUUC-Loc-052859	Lepisosteus oculatus	56.30	0.00e+00	669.00
IUUC-Laf-053953	Loxodonta africana	68.64	5.00e-173	600.00
IUUC-Mcc-055846	Macaca mulatta	74.56	0.00e+00	1050.00
IUUC-Meu-056790	Macropus eugenii	62.94	0.00e+00	753.00
IUUC-Mpo-057447	Magnaporthe poae	40.00	2.00e-02	33.90
IUUC-Mtr-058749	Medicago truncatula	39.47	2.00e-20	93.20
IUUC-Mla-058959	Melampsora laricipopulina	47.06	1.00e-08	53.50
IUUC-Mga-059656	Meleagris gallopavo	90.83	0.00e+00	1236.00
IUUC-Mmr-061089	Microcebus murinus	73.35	0.00e+00	964.00
IUUC-Mdo-063043	Monodelphis domestica	63.12	0.00e+00	661.00
IUUC-Mmu-063654	Mus musculus	69.09	0.00e+00	925.00
IUUC-Mac-064947	Musa acuminata	37.01	7.00e-18	84.70
IUUC-Mpu-066115	Mustela putorius furo	73.04	0.00e+00	799.00
IUUC-Mlu-066974	Myotis lucifugus	72.60	0.00e+00	922.00
IUUC-Nle-069184	Nomascus leucogenys	74.50	0.00e+00	1056.00
IUUC-Opr-070770	Ochotona princeps	63.71	0.00e+00	736.00
IUUC-Ont-072040	Oreochromis niloticus	47.53	8.00e-172	597.00
IUUC-Oan-073448	Ornithorhynchus anatinus	80.30	1.00e-63	235.00
IUUC-Ocu-074405	Oryctolagus cuniculus	74.63	0.00e+00	1019.00
IUUC-Oba-075977	Oryza barthii	29.61	4.00e-14	72.00
IUUC-Obr-076298	Oryza brachyantha	31.11	2.00e-19	89.70
IUUC-Ogl-077706	Oryza glaberrima	30.17	3.00e-14	72.80
IUUC-Ogu-078381	Oryza glumaepatula	30.05	4.00e-15	75.10
IUUC-Oin-080150	Oryza indica	30.60	1.00e-14	73.90
IUUC-Ome-081153	Oryza meridionalis	29.89	6.00e-14	71.60
IUUC-Oni-083115	Oryza nivara	30.05	3.00e-14	72.40
IUUC-Opu-083860	Oryza punctata	29.83	4.00e-19	89.00
IUUC-Oru-084859	Oryza rufipogon	30.60	2.00e-14	73.60
IUUC-Osa-085567	Oryza sativa	30.60	1.00e-13	70.50
IUUC-Ola-087049	Oryzias latipes	46.68	2.00e-165	575.00
IUUC-Oga-088455	Otolemur garnettii	73.69	0.00e+00	1014.00
IUUC-Oar-090096	Ovis aries	74.62	0.00e+00	1022.00
IUUC-Ptr-090974	Pan troglodytes	73.20	0.00e+00	906.00
IUUC-Pan-092657	Papio anubis	74.09	0.00e+00	1055.00
IUUC-Psi-093113	Pelodiscus sinensis	82.33	0.00e+00	1019.00
IUUC-Ppa-095466	Physcomitrella patens	39.31	2.00e-24	106.00
IUUC-Pfo-096631	Poecilia formosa	47.16	3.00e-165	575.00
IUUC-Pab-098070	Pongo abelii	74.23	0.00e+00	1050.00
IUUC-Pop-099235	Populus trichocarpa	32.34	2.00e-21	96.70
IUUC-Pca-101032	Procavia capensis	65.34	0.00e+00	789.00
IUUC-Ppe-101793	Prunus persica	32.16	2.00e-22	100.00
IUUC-Pva-102290	Pteropus vampyrus	73.05	0.00e+00	880.00
IUUC-Rno-105080	Rattus norvegicus	67.79	0.00e+00	750.00
IUUC-Sha-107598	Sarcophilus harrisii	73.16	0.00e+00	998.00
IUUC-Sit-110735	Setaria italica	29.51	6.00e-19	88.60
IUUC-Sly-111126	Solanum lycopersicum	39.47	4.00e-20	92.40
IUUC-Stu-112780	Solanum tuberosum	38.07	2.00e-23	102.00
IUUC-Sar-113418	Sorex araneus	72.13	0.00e+00	848.00
IUUC-Sbi-113925	Sorghum bicolor	31.69	5.00e-21	95.10
IUUC-Sre-115214	Sporisorium reilianum	48.57	1.00e-01	32.30
IUUC-Ssc-115712	Sus scrofa	74.93	0.00e+00	1037.00
IUUC-Tgu-117148	Taeniopygia guttata	95.79	0.00e+00	1342.00
IUUC-Tru-117831	Takifugu rubripes	47.76	1.00e-167	583.00
IUUC-Tsy-118917	Tarsius syrichta	71.06	0.00e+00	808.00
IUUC-Tni-120783	Tetraodon nigroviridis	47.33	4.00e-165	575.00
IUUC-Tca-121430	Theobroma cacao	39.20	7.00e-08	51.60
IUUC-Tae-123752	Triticum aestivum	34.13	2.00e-16	80.10
IUUC-Tur-126238	Triticum urartu	33.89	4.00e-16	78.60
IUUC-Ttr-128615	Tursiops truncatus	67.33	0.00e+00	776.00
IUUC-Vpa-130531	Vicugna pacos	74.27	0.00e+00	887.00
IUUC-Vvi-131607	Vitis vinifera	38.41	1.00e-17	84.00
IUUC-Xtr-132787	Xenopus tropicalis	60.91	0.00e+00	773.00
IUUC-Xma-133815	Xiphophorus maculatus	47.12	2.00e-164	572.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence