iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Fca-035792

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02136118

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000002183.3	ENSFCAT00000002183.3	ENSFCAP00000002016.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-81	274.4	112	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           Gl+NlgNtC+ N++LQcL+ +p+l++++l+ ++++++++     +  ++++++q  +++ +++   +++p  +++ ++++a++f+  +q
   Q: 112  GLQNLGNTCFANAALQCLTYTPPLANYMLShEHSKTCHA-----EGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQ 195
           9*****************************445555544.....578****************************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +Da+Efl++ +d++++++                  l+ +++ + +++ ++l+ ++F+g l+s++kcl+c+ vs +++p ld++l+++ 
   Q: 196  EDAHEFLQYTVDAMQKAC------------------LNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
           ******************..................3344567789999**************************************** PP
   S: 179  keetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
            +     s++++Le+f+k+e+l+gen y+c+kckk + a+k++++++ ++vL+l LkRf    ++    ki k v++p+ Ld++p++++
   Q: 267  AQ-----SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF----ANFTGGKIAKDVKYPEYLDIRPYMSQ 346
           **.....9***************************************************....668889******************** PP
   S: 268  peekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           p+ +   + +Y L+av+vH+G +++ GHY++y+k ++g W++++Ds V++++  +vl+   ++aYvlfY r
   Q: 347  PNGE---PIIYVLYAVLVHTGfNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLS---QQAYVLFYIR 411
           9977...8**************************************************...********87 PP

Organism

Felis catus

Protein Sequence
(Fasta)

MTIVDKASES SDPPAYQNQP GSSEAASPGD MDAGSASWGA VSSLNDVSNH TLSLGPVPGA 60
VVYSSSSVPD KSKPSPQKDQ ALGDGIAPPQ KVLFPSEKIC LKWQQTHRVG AGLQNLGNTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCATAG TTGACAAAGC TTCTGAATCC TCAGACCCAC CAGCCTATCA GAATCAGCCT 60
GGCAGCTCGG AGGCGGCCTC ACCGGGAGAC ATGGATGCAG GTTCTGCCAG CTGGGGGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	38.91	1.00e-70	261.00
IUUC-Aml-002303	Ailuropoda melanoleuca	83.11	0.00e+00	1639.00
IUUC-Atr-003102	Amborella trichopoda	46.91	5.00e-85	309.00
IUUC-Apl-003459	Anas platyrhynchos	52.52	0.00e+00	716.00
IUUC-Aca-004440	Anolis carolinensis	53.30	0.00e+00	1003.00
IUUC-Aly-006389	Arabidopsis lyrata	42.36	5.00e-76	279.00
IUUC-Ath-006710	Arabidopsis thaliana	42.36	8.00e-76	278.00
IUUC-Ago-007836	Ashbya gossypii	26.80	1.00e-34	141.00
IUUC-Ame-011358	Astyanax mexicanus	67.92	0.00e+00	672.00
IUUC-Bta-012803	Bos taurus	75.24	0.00e+00	1734.00
IUUC-Bdi-014036	Brachypodium distachyon	44.05	1.00e-80	294.00
IUUC-Bol-015996	Brassica oleracea	43.31	2.00e-81	297.00
IUUC-Bra-016634	Brassica rapa	43.31	6.00e-82	298.00
IUUC-Cja-019199	Callithrix jacchus	72.92	0.00e+00	1562.00
IUUC-Cfa-020597	Canis familiaris	84.30	0.00e+00	1882.00
IUUC-Cpo-021945	Cavia porcellus	69.25	0.00e+00	1601.00
IUUC-Cre-022988	Chlamydomonas reinhardtii	45.74	2.00e-49	188.00
IUUC-Csa-023485	Chlorocebus sabaeus	73.76	0.00e+00	1535.00
IUUC-Cho-024575	Choloepus hoffmanni	65.85	0.00e+00	1238.00
IUUC-Cin-025230	Ciona intestinalis	58.98	4.00e-90	324.00
IUUC-Cne-027049	Cryptococcus neoformans	31.86	7.00e-38	151.00
IUUC-Cme-027339	Cyanidioschyzon merolae	35.79	2.00e-58	219.00
IUUC-Dre-028442	Danio rerio	63.77	0.00e+00	649.00
IUUC-Dno-029673	Dasypus novemcinctus	74.98	0.00e+00	1801.00
IUUC-Dor-030518	Dipodomys ordii	62.08	4.00e-125	442.00
IUUC-Dme-032119	Drosophila melanogaster	35.93	1.00e-62	234.00
IUUC-Ete-033088	Echinops telfairi	56.29	0.00e+00	991.00
IUUC-Eca-033579	Equus caballus	77.64	0.00e+00	1712.00
IUUC-Eeu-034511	Erinaceus europaeus	54.99	0.00e+00	916.00
IUUC-Fal-037075	Ficedula albicollis	53.01	0.00e+00	770.00
IUUC-Gmo-039033	Gadus morhua	63.57	2.00e-153	536.00
IUUC-Gga-040504	Gallus gallus	44.44	0.00e+00	805.00
IUUC-Gac-042176	Gasterosteus aculeatus	56.21	7.00e-155	541.00
IUUC-Gma-044075	Glycine max	47.88	2.00e-84	307.00
IUUC-Ggo-044798	Gorilla gorilla	69.38	0.00e+00	1328.00
IUUC-Hsa-046072	Homo sapiens	74.27	0.00e+00	1553.00
IUUC-Hvu-047620	Hordeum vulgare	41.25	1.00e-73	271.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	76.66	0.00e+00	1842.00
IUUC-Lch-049867	Latimeria chalumnae	67.66	0.00e+00	952.00
IUUC-Lpe-051574	Leersia perrieri	43.97	6.00e-76	278.00
IUUC-Loc-052621	Lepisosteus oculatus	63.67	0.00e+00	691.00
IUUC-Laf-054330	Loxodonta africana	91.54	0.00e+00	1276.00
IUUC-Mcc-054900	Macaca mulatta	95.94	0.00e+00	769.00
IUUC-Meu-056877	Macropus eugenii	51.35	0.00e+00	693.00
IUUC-Mtr-058537	Medicago truncatula	46.58	3.00e-82	299.00
IUUC-Mla-059049	Melampsora laricipopulina	39.75	6.00e-55	209.00
IUUC-Mga-059501	Meleagris gallopavo	42.11	0.00e+00	743.00
IUUC-Mvi-060547	Microbotryum violaceum	45.62	2.00e-80	293.00
IUUC-Mmr-060864	Microcebus murinus	75.35	0.00e+00	1761.00
IUUC-Mdo-062395	Monodelphis domestica	61.70	0.00e+00	1493.00
IUUC-Mmu-064236	Mus musculus	66.52	0.00e+00	1496.00
IUUC-Mac-065039	Musa acuminata	43.88	1.00e-85	311.00
IUUC-Mpu-065822	Mustela putorius furo	85.59	0.00e+00	1917.00
IUUC-Mlu-067091	Myotis lucifugus	74.74	0.00e+00	1630.00
IUUC-Nle-069004	Nomascus leucogenys	73.67	0.00e+00	1572.00
IUUC-Opr-071170	Ochotona princeps	60.43	0.00e+00	1066.00
IUUC-Ont-071832	Oreochromis niloticus	61.03	0.00e+00	644.00
IUUC-Oan-073711	Ornithorhynchus anatinus	57.87	0.00e+00	1298.00
IUUC-Ocu-074596	Oryctolagus cuniculus	94.77	0.00e+00	1030.00
IUUC-Oba-075866	Oryza barthii	44.44	2.00e-80	294.00
IUUC-Obr-076408	Oryza brachyantha	41.08	3.00e-81	296.00
IUUC-Ogl-077559	Oryza glaberrima	44.30	1.00e-81	298.00
IUUC-Ogu-078064	Oryza glumaepatula	44.63	3.00e-81	296.00
IUUC-Oin-079471	Oryza indica	44.30	9.00e-82	298.00
IUUC-Olo-080231	Oryza longistaminata	42.67	1.00e-73	271.00
IUUC-Ome-081746	Oryza meridionalis	44.77	1.00e-80	294.00
IUUC-Oni-082339	Oryza nivara	35.89	4.00e-81	296.00
IUUC-Opu-083194	Oryza punctata	44.63	1.00e-80	295.00
IUUC-Oru-085083	Oryza rufipogon	44.63	3.00e-81	296.00
IUUC-Osa-085395	Oryza sativa	44.30	7.00e-82	299.00
IUUC-Ola-087255	Oryzias latipes	59.22	2.00e-155	543.00
IUUC-Olu-087773	Ostreococcus lucimarinus	42.54	1.00e-67	249.00
IUUC-Oga-088641	Otolemur garnettii	75.22	0.00e+00	1731.00
IUUC-Oar-089760	Ovis aries	71.98	0.00e+00	1577.00
IUUC-Ptr-091445	Pan troglodytes	73.93	0.00e+00	1565.00
IUUC-Pan-092484	Papio anubis	73.99	0.00e+00	1477.00
IUUC-Psi-093277	Pelodiscus sinensis	55.09	0.00e+00	1131.00
IUUC-Pma-094651	Petromyzon marinus	38.24	1.00e-56	213.00
IUUC-Ppa-095853	Physcomitrella patens	46.82	1.00e-89	325.00
IUUC-Pfo-096469	Poecilia formosa	66.33	0.00e+00	647.00
IUUC-Pab-097794	Pongo abelii	72.63	0.00e+00	1444.00
IUUC-Pop-099693	Populus trichocarpa	44.73	2.00e-80	294.00
IUUC-Pca-100117	Procavia capensis	58.30	6.00e-85	309.00
IUUC-Ppe-101678	Prunus persica	46.25	9.00e-82	298.00
IUUC-Pva-103238	Pteropus vampyrus	72.17	0.00e+00	1485.00
IUUC-Pgr-103270	Puccinia graminis	42.59	5.00e-63	235.00
IUUC-Ptt-103887	Puccinia triticina	38.63	2.00e-62	233.00
IUUC-Rno-105068	Rattus norvegicus	67.21	0.00e+00	1531.00
IUUC-Sha-106713	Sarcophilus harrisii	62.61	0.00e+00	1524.00
IUUC-Sja-107805	Schizosaccharomyces japonicus	38.78	2.00e-67	249.00
IUUC-Spo-108119	Schizosaccharomyces pombe	43.24	5.00e-80	291.00
IUUC-Smo-108763	Selaginella moellendorffii	47.73	2.00e-80	291.00
IUUC-Sit-109895	Setaria italica	44.30	9.00e-83	301.00
IUUC-Sly-111722	Solanum lycopersicum	44.65	4.00e-78	286.00
IUUC-Stu-112912	Solanum tuberosum	44.34	3.00e-77	283.00
IUUC-Sar-113340	Sorex araneus	83.77	0.00e+00	1105.00
IUUC-Sbi-114477	Sorghum bicolor	44.81	1.00e-83	304.00
IUUC-Sre-114924	Sporisorium reilianum	38.81	5.00e-60	226.00
IUUC-Ssc-116022	Sus scrofa	71.12	1.00e-146	514.00
IUUC-Tgu-117149	Taeniopygia guttata	53.30	0.00e+00	769.00
IUUC-Tru-117776	Takifugu rubripes	64.81	2.00e-175	609.00
IUUC-Tsy-118974	Tarsius syrichta	73.50	0.00e+00	1729.00
IUUC-Tni-120774	Tetraodon nigroviridis	67.70	4.00e-172	597.00
IUUC-Tca-120936	Theobroma cacao	45.93	4.00e-84	306.00
IUUC-Tae-122827	Triticum aestivum	41.55	6.00e-83	302.00
IUUC-Tur-126014	Triticum urartu	44.77	8.00e-79	288.00
IUUC-Tbe-128006	Tupaia belangeri	65.27	4.00e-124	439.00
IUUC-Ttr-128764	Tursiops truncatus	66.05	0.00e+00	1436.00
IUUC-Uma-129416	Ustilago maydis	39.70	3.00e-61	229.00
IUUC-Vpa-130568	Vicugna pacos	63.25	1.00e-40	162.00
IUUC-Vvi-131535	Vitis vinifera	46.35	2.00e-86	314.00
IUUC-Xtr-132544	Xenopus tropicalis	58.43	0.00e+00	647.00
IUUC-Xma-133131	Xiphophorus maculatus	63.08	0.00e+00	647.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence