iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000003366.2	ENSSSCT00000003736.2	ENSSSCP00000003650.2
ENSSSCG00000003366.2	ENSSSCT00000019561.2	ENSSSCP00000019043.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.50e-17	61.7	276	321

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 276  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 321
           79*********....9******************.*******7.******86 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

QGSNDELSEN EEDLEEKSES EGSDYSPNKK KKKKLKDKKE KKAKRKKKDD DEDDNDDGCL 60
KEPKSSGQLM AEWGLDDVDY LFSEADYHTL TNYKAFSQFL RPLIAKKNPK IPMSKMMTVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGGGAGCA ATGATGAGCT GTCGGAAAAT GAAGAGGATC TGGAAGAGAA GTCAGAGAGC 60
GAGGGTAGTG ACTACTCCCC GAATAAAAAG AAGAAGAAAA AACTCAAGGA CAAGAAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	96.47	0.00e+00	2757.00
IUUC-Apl-003406	Anas platyrhynchos	83.54	0.00e+00	2102.00
IUUC-Aca-004671	Anolis carolinensis	82.29	0.00e+00	2431.00
IUUC-Aly-005645	Arabidopsis lyrata	39.43	2.00e-152	534.00
IUUC-Ath-007406	Arabidopsis thaliana	40.16	1.00e-157	551.00
IUUC-Ame-011883	Astyanax mexicanus	80.57	0.00e+00	2138.00
IUUC-Bta-012951	Bos taurus	90.69	0.00e+00	2364.00
IUUC-Bol-016073	Brassica oleracea	41.29	2.00e-157	551.00
IUUC-Bra-016724	Brassica rapa	41.52	2.00e-158	554.00
IUUC-Cel-018108	Caenorhabditis elegans	57.06	0.00e+00	1316.00
IUUC-Cja-018871	Callithrix jacchus	93.26	0.00e+00	2741.00
IUUC-Cfa-021063	Canis familiaris	97.35	0.00e+00	2680.00
IUUC-Cpo-022083	Cavia porcellus	94.03	0.00e+00	2659.00
IUUC-Csa-023084	Chlorocebus sabaeus	96.89	0.00e+00	2878.00
IUUC-Dme-032150	Drosophila melanogaster	61.00	0.00e+00	1421.00
IUUC-Eca-034372	Equus caballus	97.78	0.00e+00	2732.00
IUUC-Fca-036048	Felis catus	96.78	0.00e+00	2703.00
IUUC-Fal-037282	Ficedula albicollis	88.26	0.00e+00	2533.00
IUUC-Gga-040607	Gallus gallus	88.22	0.00e+00	2247.00
IUUC-Ggo-044514	Gorilla gorilla	96.77	0.00e+00	2860.00
IUUC-Hsa-046181	Homo sapiens	96.83	0.00e+00	2842.00
IUUC-Loc-052795	Lepisosteus oculatus	79.68	0.00e+00	2410.00
IUUC-Laf-053749	Loxodonta africana	96.94	0.00e+00	2793.00
IUUC-Mcc-055856	Macaca mulatta	96.89	0.00e+00	2877.00
IUUC-Mga-059630	Meleagris gallopavo	88.44	0.00e+00	2541.00
IUUC-Mmr-060986	Microcebus murinus	94.73	0.00e+00	2689.00
IUUC-Mmu-063644	Mus musculus	95.32	0.00e+00	2762.00
IUUC-Mpu-066528	Mustela putorius furo	96.22	0.00e+00	2482.00
IUUC-Nle-069824	Nomascus leucogenys	93.74	0.00e+00	2613.00
IUUC-Ola-086961	Oryzias latipes	74.12	0.00e+00	2193.00
IUUC-Oga-088775	Otolemur garnettii	96.71	0.00e+00	2763.00
IUUC-Oar-090301	Ovis aries	96.95	0.00e+00	2678.00
IUUC-Ptr-090586	Pan troglodytes	94.55	0.00e+00	2796.00
IUUC-Pan-092282	Papio anubis	96.95	0.00e+00	2877.00
IUUC-Psi-093007	Pelodiscus sinensis	86.96	0.00e+00	2339.00
IUUC-Pfo-096802	Poecilia formosa	76.56	0.00e+00	2259.00
IUUC-Pab-097677	Pongo abelii	98.31	0.00e+00	2497.00
IUUC-Pca-100559	Procavia capensis	92.73	0.00e+00	2600.00
IUUC-Rno-105378	Rattus norvegicus	94.59	0.00e+00	2711.00
IUUC-Sha-107350	Sarcophilus harrisii	85.99	0.00e+00	2529.00
IUUC-Smo-108946	Selaginella moellendorffii	36.85	1.00e-165	578.00
IUUC-Tgu-116779	Taeniopygia guttata	81.55	0.00e+00	2324.00
IUUC-Tru-117597	Takifugu rubripes	77.31	0.00e+00	2274.00
IUUC-Ttr-128301	Tursiops truncatus	95.21	0.00e+00	2750.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence