iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G32090	GLYMA08G32090.1	GLYMA08G32090.1
GLYMA08G32090	GLYMA08G32090.3	GLYMA08G32090.3
GLYMA08G32090	GLYMA08G32090.2	GLYMA08G32090.2
GLYMA08G32090	GLYMA08G32090.4	GLYMA08G32090.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.40e-23	82.0	170	211
ULD/UDP/UBQ/UBQ_PIM	1.00e-24	87.8	1	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e  ++q+ +MG   +dr+++++ Lraa+nn+e+AveyL++g
   Q: 170  LEGTIQQILDMGggsWDRDTVVRTLRAAYNNPERAVEYLYSG 211
           6789***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksks 76
           mk++vktlkg++fe+ev+++dt++e+K++i++++g   +p++qq LI++Gk+LkD ttL+e+++ + s+++++++k+ks
   Q: 1    MKVFVKTLKGTHFEIEVNPSDTLSEVKKNIETVQGadvYPAAQQMLIHQGKVLKDGTTLEENKVAESSFIVIMLSKTKS 79
           99*************************************************************************9985 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MKVFVKTLKG THFEIEVNPS DTLSEVKKNI ETVQGADVYP AAQQMLIHQG KVLKDGTTLE 60
ENKVAESSFI VIMLSKTKSS SGEGSTTSTA PSAKPSATPT STSVSTAPQA PASTGASATP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATAAAAAC GTGATAAAAA AGTGATTCTG CTCACAGTCG TTTCGGGGTA GCATTCTTGC 60
GCACTCAGTT ATTCTCTCTC TCTCTCTAGA GCGTCGTCGT TTAGTTAGGG CAGAAAACCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	38.11	2.00e-29	123.00
IUUC-Apl-003371	Anas platyrhynchos	36.54	9.00e-32	130.00
IUUC-Cfa-020683	Canis familiaris	34.70	3.00e-29	122.00
IUUC-Dno-029543	Dasypus novemcinctus	37.50	3.00e-31	129.00
IUUC-Ete-032583	Echinops telfairi	37.96	2.00e-19	89.70
IUUC-Eeu-034721	Erinaceus europaeus	35.15	3.00e-19	89.40
IUUC-Ggo-045125	Gorilla gorilla	37.36	2.00e-31	129.00
IUUC-Hsa-046519	Homo sapiens	37.36	2.00e-31	129.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	35.94	5.00e-27	115.00
IUUC-Laf-054293	Loxodonta africana	37.11	3.00e-30	125.00
IUUC-Mcc-055600	Macaca mulatta	34.38	1.00e-31	130.00
IUUC-Mpu-066389	Mustela putorius furo	37.36	7.00e-29	121.00
IUUC-Nle-069655	Nomascus leucogenys	34.38	9.00e-32	130.00
IUUC-Ogu-078101	Oryza glumaepatula	57.91	2.00e-115	409.00
IUUC-Olo-080382	Oryza longistaminata	58.15	2.00e-115	409.00
IUUC-Ome-081652	Oryza meridionalis	58.15	2.00e-115	409.00
IUUC-Oga-088023	Otolemur garnettii	37.07	1.00e-30	127.00
IUUC-Ptr-091165	Pan troglodytes	37.36	2.00e-31	129.00
IUUC-Pan-092009	Papio anubis	34.38	2.00e-30	126.00
IUUC-Pab-097868	Pongo abelii	37.36	4.00e-31	128.00
IUUC-Sly-111480	Solanum lycopersicum	72.82	4.00e-152	530.00
IUUC-Stu-112027	Solanum tuberosum	71.60	8.00e-152	529.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence